RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-206ENST00000489414 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
EXOSC3-206ENST00000489414 NUTM2DQ5VT03 806 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-206ENST00000489414 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-206ENST00000489414 NHSL1Q5SYE7 1610 aa13.68□□□□□ -0.22
EXOSC3-206ENST00000489414 SPATA31A6Q5VVP1 1343 aa13.67□□□□□ -0.22
EXOSC3-206ENST00000489414 CEP350Q5VT06 3117 aa13.67□□□□□ -0.22
EXOSC3-206ENST00000489414 ABCC1P33527 1531 aa13.66□□□□□ -0.22
EXOSC3-206ENST00000489414 COL16A1Q07092 1604 aaPredicted RBP13.65□□□□□ -0.22
EXOSC3-206ENST00000489414 MYT1LQ9UL68 1186 aa13.65□□□□□ -0.22
EXOSC3-206ENST00000489414 ITSN2Q9NZM3 1697 aa13.65□□□□□ -0.22
EXOSC3-206ENST00000489414 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-206ENST00000489414 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
EXOSC3-206ENST00000489414 EFCAB2Q5VUJ9 269 aa13.62□□□□□ -0.23
EXOSC3-206ENST00000489414 KDM5DQ9BY66 1539 aa13.62□□□□□ -0.23
EXOSC3-206ENST00000489414 FGD6Q6ZV73 1430 aa13.62□□□□□ -0.23
EXOSC3-206ENST00000489414 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
EXOSC3-206ENST00000489414 KIDINS220Q9ULH0 1771 aa13.61□□□□□ -0.23
EXOSC3-206ENST00000489414 ZC3H13Q5T200 1668 aaKnown RBP13.61□□□□□ -0.23
EXOSC3-206ENST00000489414 SHPRHQ149N8 1683 aa13.59□□□□□ -0.23
EXOSC3-206ENST00000489414 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
EXOSC3-206ENST00000489414 CCDC125Q86Z20 511 aa13.58□□□□□ -0.24
EXOSC3-206ENST00000489414 P3H3Q8IVL6 736 aa13.58□□□□□ -0.24
EXOSC3-206ENST00000489414 AFF2P51816 1311 aa13.57□□□□□ -0.24
EXOSC3-206ENST00000489414 NWD1Q149M9 1564 aa13.57□□□□□ -0.24
EXOSC3-206ENST00000489414 SLC34A2O95436 690 aa13.54□□□□□ -0.24
EXOSC3-206ENST00000489414 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
EXOSC3-206ENST00000489414 TNRQ92752 1358 aa13.54□□□□□ -0.24
EXOSC3-206ENST00000489414 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
EXOSC3-206ENST00000489414 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
EXOSC3-206ENST00000489414 UGGT1Q9NYU2 1555 aa13.54□□□□□ -0.24
EXOSC3-206ENST00000489414 FAM135AQ9P2D6 1515 aa13.53□□□□□ -0.24
EXOSC3-206ENST00000489414 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
EXOSC3-206ENST00000489414 BCL9LQ86UU0 1499 aa13.52□□□□□ -0.25
EXOSC3-206ENST00000489414 KIF14Q15058 1648 aa13.52□□□□□ -0.25
EXOSC3-206ENST00000489414 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
EXOSC3-206ENST00000489414 QTRT2Q9H974 415 aaKnown RBP13.51□□□□□ -0.25
EXOSC3-206ENST00000489414 ARHGAP5Q13017 1502 aa13.5□□□□□ -0.25
EXOSC3-206ENST00000489414 TMEM94Q12767 1356 aa13.5□□□□□ -0.25
EXOSC3-206ENST00000489414 HRCP23327 699 aa13.5□□□□□ -0.25
EXOSC3-206ENST00000489414 C1QTNF8P60827 252 aa13.5□□□□□ -0.25
EXOSC3-206ENST00000489414 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
EXOSC3-206ENST00000489414 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
EXOSC3-206ENST00000489414 UTRNP46939 3433 aa13.47□□□□□ -0.25
EXOSC3-206ENST00000489414 NGLY1Q96IV0 654 aa13.47□□□□□ -0.25
EXOSC3-206ENST00000489414 ZNF784Q8NCA9 323 aaPredicted RBP13.45□□□□□ -0.26
EXOSC3-206ENST00000489414 AHDC1Q5TGY3 1603 aaPredicted RBP13.44□□□□□ -0.26
EXOSC3-206ENST00000489414 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
EXOSC3-206ENST00000489414 SLAIN2Q9P270 581 aa13.44□□□□□ -0.26
EXOSC3-206ENST00000489414 TIAM1Q13009 1591 aa13.44□□□□□ -0.26
EXOSC3-206ENST00000489414 DIP2AQ14689 1571 aa13.44□□□□□ -0.26
EXOSC3-206ENST00000489414 PZPP20742 1482 aa13.43□□□□□ -0.26
EXOSC3-206ENST00000489414 BLMP54132 1417 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-206ENST00000489414 PSDA5PKW4 1024 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-206ENST00000489414 GGT6Q6P531 493 aa13.42□□□□□ -0.26
EXOSC3-206ENST00000489414 CDC42BPBQ9Y5S2 1711 aa13.41□□□□□ -0.26
EXOSC3-206ENST00000489414 MIA2Q96PC5 1412 aa13.4□□□□□ -0.26
EXOSC3-206ENST00000489414 DEFB132Q7Z7B7 95 aa13.4□□□□□ -0.26
EXOSC3-206ENST00000489414 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
EXOSC3-206ENST00000489414 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
EXOSC3-206ENST00000489414 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
EXOSC3-206ENST00000489414 SAMD9LQ8IVG5 1584 aa13.39□□□□□ -0.27
EXOSC3-206ENST00000489414 ABCC3O15438 1527 aa13.39□□□□□ -0.27
EXOSC3-206ENST00000489414 C8orf37Q96NL8 207 aa13.38□□□□□ -0.27
EXOSC3-206ENST00000489414 PRDM15P57071 1507 aaPredicted RBP13.38□□□□□ -0.27
EXOSC3-206ENST00000489414 A2MP01023 1474 aa13.37□□□□□ -0.27
EXOSC3-206ENST00000489414 MSH6P52701 1360 aa13.37□□□□□ -0.27
EXOSC3-206ENST00000489414 ADGBQ8N7X0 1667 aa13.36□□□□□ -0.27
EXOSC3-206ENST00000489414 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
EXOSC3-206ENST00000489414 KDM5AP29375 1690 aaKnown RBP13.34□□□□□ -0.27
EXOSC3-206ENST00000489414 NKTRP30414 1462 aaKnown RBP13.32□□□□□ -0.28
EXOSC3-206ENST00000489414 PROSER2Q86WR7 435 aaPredicted RBP13.32□□□□□ -0.28
EXOSC3-206ENST00000489414 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
EXOSC3-206ENST00000489414 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
EXOSC3-206ENST00000489414 INO80Q9ULG1 1556 aaPredicted RBP13.3□□□□□ -0.28
EXOSC3-206ENST00000489414 KCNA6P17658 529 aa13.3□□□□□ -0.28
EXOSC3-206ENST00000489414 UBR1Q8IWV7 1749 aa13.3□□□□□ -0.28
EXOSC3-206ENST00000489414 PRXQ9BXM0 1461 aa13.29□□□□□ -0.28
EXOSC3-206ENST00000489414 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
EXOSC3-206ENST00000489414 LTKP29376 864 aa13.29□□□□□ -0.28
EXOSC3-206ENST00000489414 TRPC5Q9UL62 973 aaPredicted RBP13.29□□□□□ -0.28
EXOSC3-206ENST00000489414 ATRNO75882 1429 aa13.29□□□□□ -0.28
EXOSC3-206ENST00000489414 NCOA2Q15596 1464 aa13.29□□□□□ -0.28
EXOSC3-206ENST00000489414 SLIT1O75093 1534 aa13.29□□□□□ -0.28
EXOSC3-206ENST00000489414 SPAG9O60271 1321 aaKnown RBP13.28□□□□□ -0.28
EXOSC3-206ENST00000489414 RTEL1-TNFRSF6BF6WH68 1400 aa13.28□□□□□ -0.28
EXOSC3-206ENST00000489414 UNC13BO14795 1591 aa13.28□□□□□ -0.28
EXOSC3-206ENST00000489414 SETD5Q9C0A6 1442 aa13.27□□□□□ -0.29
EXOSC3-206ENST00000489414 SF3B2Q13435 895 aaKnown RBP13.25□□□□□ -0.29
EXOSC3-206ENST00000489414 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
EXOSC3-206ENST00000489414 MAST1Q9Y2H9 1570 aa13.24□□□□□ -0.29
EXOSC3-206ENST00000489414 TXNDC2Q86VQ3 553 aa13.24□□□□□ -0.29
EXOSC3-206ENST00000489414 USP21Q9UK80 565 aa13.24□□□□□ -0.29
EXOSC3-206ENST00000489414 TROQ12816 1431 aaPredicted RBP13.22□□□□□ -0.29
EXOSC3-206ENST00000489414 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
EXOSC3-206ENST00000489414 SYCP2Q9BX26 1530 aa13.22□□□□□ -0.29
EXOSC3-206ENST00000489414 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
EXOSC3-206ENST00000489414 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
EXOSC3-206ENST00000489414 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
EXOSC3-206ENST00000489414 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms