RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 DDX3XO00571 662 aaKnown RBP eCLIP7.08□□□□□ -1.283e-15■■□□□ 13.5
EXOSC3-206ENST00000489414 RBM5P52756 815 aaKnown RBP eCLIP9.98□□□□□ -0.811e-14■■■■■ 51.6
EXOSC3-206ENST00000489414 U2AF2P26368 475 aaKnown RBP eCLIP8.44□□□□□ -1.065e-10■■■■■ 27.4
EXOSC3-206ENST00000489414 RPS3P23396 243 aaKnown RBP eCLIP6.53□□□□□ -1.369e-10■■■■□ 25.3
EXOSC3-206ENST00000489414 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.312e-9■□□□□ 10.1
EXOSC3-206ENST00000489414 PCBP2Q15366 365 aaKnown RBP eCLIP7.51□□□□□ -1.214e-8■■■■■ 35.6
EXOSC3-206ENST00000489414 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.4□□□□□ -0.97e-8■■□□□ 12.7
EXOSC3-206ENST00000489414 ZRANB2O95218 330 aaKnown RBP eCLIP7.39□□□□□ -1.231e-7■□□□□ 10.3
EXOSC3-206ENST00000489414 HNRNPLP14866 589 aaKnown RBP eCLIP8.46□□□□□ -1.061e-7■■□□□ 14
EXOSC3-206ENST00000489414 FTOQ9C0B1 505 aaKnown RBP eCLIP9.54□□□□□ -0.881e-6■□□□□ 8.2
EXOSC3-206ENST00000489414 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.142e-6■■■□□ 15.2
EXOSC3-206ENST00000489414 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.93□□□□□ -1.144e-6■■■■□ 23.7
EXOSC3-206ENST00000489414 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.594e-6■■■■□ 21.6
EXOSC3-206ENST00000489414 PTBP1P26599 531 aaKnown RBP eCLIP5.95□□□□□ -1.465e-6■■□□□ 13.8
Retrieved 14 of 14 RNA–protein pairs in 10.2 ms