RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 IQGAP3Q86VI3 1631 aa19.53■□□□□ 0.72
ABCB1-207ENST00000488737 ZBED9Q6R2W3 1325 aa19.52■□□□□ 0.72
ABCB1-207ENST00000488737 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.71
ABCB1-207ENST00000488737 UHRF1BP1LA0JNW5 1464 aa19.51■□□□□ 0.71
ABCB1-207ENST00000488737 ERICH6BQ5W0A0 696 aa19.5■□□□□ 0.71
ABCB1-207ENST00000488737 DUOX2Q9NRD8 1548 aa19.49■□□□□ 0.71
ABCB1-207ENST00000488737 ZCCHC11Q5TAX3 1644 aaKnown RBP19.48■□□□□ 0.71
ABCB1-207ENST00000488737 TRPM1Q7Z4N2 1603 aa19.48■□□□□ 0.71
ABCB1-207ENST00000488737 CARD11Q9BXL7 1154 aa19.48■□□□□ 0.71
ABCB1-207ENST00000488737 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
ABCB1-207ENST00000488737 CCDC144AA2RUR9 1427 aa19.48■□□□□ 0.71
ABCB1-207ENST00000488737 LAMC1P11047 1609 aa19.47■□□□□ 0.71
ABCB1-207ENST00000488737 E9PCH4 1651 aa19.47■□□□□ 0.71
ABCB1-207ENST00000488737 FAM9BQ8IZU0 186 aa19.46■□□□□ 0.71
ABCB1-207ENST00000488737 ERBINQ96RT1 1412 aa19.46■□□□□ 0.71
ABCB1-207ENST00000488737 PLCH2O75038 1416 aa19.45■□□□□ 0.7
ABCB1-207ENST00000488737 DCAF11Q8TEB1 546 aa19.44■□□□□ 0.7
ABCB1-207ENST00000488737 PRAG1Q86YV5 1406 aa19.44■□□□□ 0.7
ABCB1-207ENST00000488737 ATP10AO60312 1499 aa19.44■□□□□ 0.7
ABCB1-207ENST00000488737 KTN1Q86UP2 1357 aaKnown RBP19.43■□□□□ 0.7
ABCB1-207ENST00000488737 ABCC1P33527 1531 aa19.43■□□□□ 0.7
ABCB1-207ENST00000488737 PLA2R1Q13018 1463 aa19.42■□□□□ 0.7
ABCB1-207ENST00000488737 EIF2AK4Q9P2K8 1649 aaKnown RBP19.42■□□□□ 0.7
ABCB1-207ENST00000488737 ARAP3Q8WWN8 1544 aa19.42■□□□□ 0.7
ABCB1-207ENST00000488737 GPRASP1Q5JY77 1395 aa19.4■□□□□ 0.7
ABCB1-207ENST00000488737 KDM2AQ9Y2K7 1162 aa19.39■□□□□ 0.7
ABCB1-207ENST00000488737 A2MP01023 1474 aa19.39■□□□□ 0.69
ABCB1-207ENST00000488737 ST20-MTHFSA0A0A6YYL1 179 aa19.38■□□□□ 0.69
ABCB1-207ENST00000488737 EFCAB2Q5VUJ9 269 aa19.37■□□□□ 0.69
ABCB1-207ENST00000488737 POLR3GLQ9BT43 218 aa19.37■□□□□ 0.69
ABCB1-207ENST00000488737 PRDM15P57071 1507 aaPredicted RBP19.36■□□□□ 0.69
ABCB1-207ENST00000488737 CYB5RLQ6IPT4 315 aa19.36■□□□□ 0.69
ABCB1-207ENST00000488737 SMG6Q86US8 1419 aaKnown RBP19.35■□□□□ 0.69
ABCB1-207ENST00000488737 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
ABCB1-207ENST00000488737 BRD4O60885 1362 aaPredicted RBP19.33■□□□□ 0.68
ABCB1-207ENST00000488737 RALBP1Q15311 655 aa19.33■□□□□ 0.68
ABCB1-207ENST00000488737 PPP4R2Q9NY27 417 aa19.33■□□□□ 0.68
ABCB1-207ENST00000488737 RNF17Q9BXT8 1623 aaKnown RBP19.31■□□□□ 0.68
ABCB1-207ENST00000488737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.68
ABCB1-207ENST00000488737 COL17A1Q9UMD9 1497 aaPredicted RBP19.3■□□□□ 0.68
ABCB1-207ENST00000488737 TRAPPC8Q9Y2L5 1435 aa19.3■□□□□ 0.68
ABCB1-207ENST00000488737 PNISRQ8TF01 805 aaKnown RBP19.3■□□□□ 0.68
ABCB1-207ENST00000488737 MYBBP1AQ9BQG0 1328 aaKnown RBP19.3■□□□□ 0.68
ABCB1-207ENST00000488737 ZFYVE16Q7Z3T8 1539 aa19.29■□□□□ 0.68
ABCB1-207ENST00000488737 DEPDC5O75140 1603 aa19.29■□□□□ 0.68
ABCB1-207ENST00000488737 LRPPRCP42704 1394 aaKnown RBP19.28■□□□□ 0.68
ABCB1-207ENST00000488737 IRX6P78412 446 aaPredicted RBP19.28■□□□□ 0.68
ABCB1-207ENST00000488737 TMC1Q8TDI8 760 aa19.28■□□□□ 0.68
ABCB1-207ENST00000488737 RBM19Q9Y4C8 960 aaKnown RBP19.26■□□□□ 0.67
ABCB1-207ENST00000488737 ABCA9Q8IUA7 1624 aa19.26■□□□□ 0.67
ABCB1-207ENST00000488737 NUDCQ9Y266 331 aa19.26■□□□□ 0.67
ABCB1-207ENST00000488737 TRPM2O94759 1503 aa19.26■□□□□ 0.67
ABCB1-207ENST00000488737 CEP152O94986 1710 aa19.25■□□□□ 0.67
ABCB1-207ENST00000488737 RGL3Q3MIN7 710 aa19.25■□□□□ 0.67
ABCB1-207ENST00000488737 SPHKAPQ2M3C7 1700 aa19.24■□□□□ 0.67
ABCB1-207ENST00000488737 PARD3Q8TEW0 1356 aa19.24■□□□□ 0.67
ABCB1-207ENST00000488737 NPM1P06748 294 aaKnown RBP eCLIP19.24■□□□□ 0.67
ABCB1-207ENST00000488737 INO80Q9ULG1 1556 aaPredicted RBP19.24■□□□□ 0.67
ABCB1-207ENST00000488737 WDR7Q9Y4E6 1490 aa19.24■□□□□ 0.67
ABCB1-207ENST00000488737 SPAG9O60271 1321 aaKnown RBP19.24■□□□□ 0.67
ABCB1-207ENST00000488737 WASHC2CQ9Y4E1 1318 aa19.24■□□□□ 0.67
ABCB1-207ENST00000488737 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
ABCB1-207ENST00000488737 TET3O43151 1660 aa19.23■□□□□ 0.67
ABCB1-207ENST00000488737 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
ABCB1-207ENST00000488737 MADDQ8WXG6 1647 aa19.22■□□□□ 0.67
ABCB1-207ENST00000488737 STAC3Q96MF2 364 aa19.22■□□□□ 0.67
ABCB1-207ENST00000488737 TESK2Q96S53 571 aa19.21■□□□□ 0.67
ABCB1-207ENST00000488737 PTPRTO14522 1441 aa19.21■□□□□ 0.67
ABCB1-207ENST00000488737 VWDEQ8N2E2 1590 aa19.21■□□□□ 0.67
ABCB1-207ENST00000488737 IQGAP1P46940 1657 aa19.2■□□□□ 0.66
ABCB1-207ENST00000488737 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
ABCB1-207ENST00000488737 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
ABCB1-207ENST00000488737 NLRP13Q86W25 1043 aa19.19■□□□□ 0.66
ABCB1-207ENST00000488737 ZMYM4Q5VZL5 1548 aa19.19■□□□□ 0.66
ABCB1-207ENST00000488737 ASXL2Q76L83 1435 aa19.18■□□□□ 0.66
ABCB1-207ENST00000488737 PER1O15534 1290 aaPredicted RBP19.18■□□□□ 0.66
ABCB1-207ENST00000488737 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
ABCB1-207ENST00000488737 INSRP06213 1382 aa19.18■□□□□ 0.66
ABCB1-207ENST00000488737 DNAJC5Q9H3Z4 198 aa19.18■□□□□ 0.66
ABCB1-207ENST00000488737 DISP3Q9P2K9 1392 aa19.17■□□□□ 0.66
ABCB1-207ENST00000488737 FANCAO15360 1455 aa19.17■□□□□ 0.66
ABCB1-207ENST00000488737 CLTCL1P53675 1640 aa19.16■□□□□ 0.66
ABCB1-207ENST00000488737 TMF1P82094 1093 aa19.16■□□□□ 0.66
ABCB1-207ENST00000488737 KIAA1210Q9ULL0 1709 aa19.15■□□□□ 0.66
ABCB1-207ENST00000488737 SCAPERQ9BY12 1400 aa19.15■□□□□ 0.66
ABCB1-207ENST00000488737 KANK1Q14678 1352 aa19.14■□□□□ 0.65
ABCB1-207ENST00000488737 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
ABCB1-207ENST00000488737 ANP32EQ9BTT0 268 aa19.13■□□□□ 0.65
ABCB1-207ENST00000488737 ADGRL1O94910 1474 aa19.11■□□□□ 0.65
ABCB1-207ENST00000488737 SCAF11Q99590 1463 aaKnown RBP19.1■□□□□ 0.65
ABCB1-207ENST00000488737 MROH1Q8NDA8 1641 aa19.1■□□□□ 0.65
ABCB1-207ENST00000488737 FANCIQ9NVI1 1328 aa19.09■□□□□ 0.65
ABCB1-207ENST00000488737 SYNMO15061 1565 aa19.09■□□□□ 0.65
ABCB1-207ENST00000488737 PDE3BQ13370 1112 aa19.08■□□□□ 0.65
ABCB1-207ENST00000488737 B4GALNT3Q6L9W6 998 aa19.08■□□□□ 0.65
ABCB1-207ENST00000488737 PANK3Q9H999 370 aa19.07■□□□□ 0.64
ABCB1-207ENST00000488737 BLMP54132 1417 aaPredicted RBP19.06■□□□□ 0.64
ABCB1-207ENST00000488737 TSPOAP1O95153 1857 aa19.06■□□□□ 0.64
ABCB1-207ENST00000488737 KIF1BO60333 1816 aa19.06■□□□□ 0.64
ABCB1-207ENST00000488737 CDCA8Q53HL2 280 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms