RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 ATP10AO60312 1499 aa22.31■■□□□ 1.16
CTNS-206ENST00000488623 KIF3BO15066 747 aa22.31■■□□□ 1.16
CTNS-206ENST00000488623 MPHOSPH9Q99550 1183 aa22.31■■□□□ 1.16
CTNS-206ENST00000488623 ARID4BQ4LE39 1312 aaPredicted RBP22.3■■□□□ 1.16
CTNS-206ENST00000488623 NUP155O75694 1391 aa22.29■■□□□ 1.16
CTNS-206ENST00000488623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.29■■□□□ 1.16
CTNS-206ENST00000488623 PZPP20742 1482 aa22.28■■□□□ 1.16
CTNS-206ENST00000488623 EIF2AK4Q9P2K8 1649 aaKnown RBP22.28■■□□□ 1.16
CTNS-206ENST00000488623 UNC13BO14795 1591 aa22.27■■□□□ 1.16
CTNS-206ENST00000488623 SIGLEC1Q9BZZ2 1709 aa22.27■■□□□ 1.16
CTNS-206ENST00000488623 MADDQ8WXG6 1647 aa22.27■■□□□ 1.16
CTNS-206ENST00000488623 KDM5DQ9BY66 1539 aa22.26■■□□□ 1.15
CTNS-206ENST00000488623 SLC4A1APQ9BWU0 796 aaKnown RBP22.25■■□□□ 1.15
CTNS-206ENST00000488623 DEPDC5O75140 1603 aa22.23■■□□□ 1.15
CTNS-206ENST00000488623 PTPRMP28827 1452 aa22.22■■□□□ 1.15
CTNS-206ENST00000488623 REREQ9P2R6 1566 aa22.22■■□□□ 1.15
CTNS-206ENST00000488623 RIMS1Q86UR5 1692 aaKnown RBP22.22■■□□□ 1.15
CTNS-206ENST00000488623 CLSPNQ9HAW4 1339 aa22.21■■□□□ 1.15
CTNS-206ENST00000488623 FAM135AQ9P2D6 1515 aa22.2■■□□□ 1.14
CTNS-206ENST00000488623 MROH1Q8NDA8 1641 aa22.2■■□□□ 1.14
CTNS-206ENST00000488623 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.14
CTNS-206ENST00000488623 FOXD1Q16676 465 aa22.19■■□□□ 1.14
CTNS-206ENST00000488623 GGT6Q6P531 493 aa22.19■■□□□ 1.14
CTNS-206ENST00000488623 IQGAP3Q86VI3 1631 aa22.19■■□□□ 1.14
CTNS-206ENST00000488623 AGLP35573 1532 aa22.18■■□□□ 1.14
CTNS-206ENST00000488623 PKD2Q13563 968 aa22.18■■□□□ 1.14
CTNS-206ENST00000488623 VWDEQ8N2E2 1590 aa22.17■■□□□ 1.14
CTNS-206ENST00000488623 FER1L4A9Z1Z3 1794 aa22.17■■□□□ 1.14
CTNS-206ENST00000488623 KANK1Q14678 1352 aa22.16■■□□□ 1.14
CTNS-206ENST00000488623 PRDM15P57071 1507 aaPredicted RBP22.16■■□□□ 1.14
CTNS-206ENST00000488623 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
CTNS-206ENST00000488623 ANKRD30BQ9BXX2 1392 aa22.11■■□□□ 1.13
CTNS-206ENST00000488623 MLECQ14165 292 aa22.1■■□□□ 1.13
CTNS-206ENST00000488623 ZEB1P37275 1124 aaPredicted RBP22.09■■□□□ 1.13
CTNS-206ENST00000488623 WASHC2CQ9Y4E1 1318 aa22.08■■□□□ 1.13
CTNS-206ENST00000488623 LMTK2Q8IWU2 1503 aa22.08■■□□□ 1.13
CTNS-206ENST00000488623 CEP152O94986 1710 aa22.08■■□□□ 1.12
CTNS-206ENST00000488623 TET3O43151 1660 aa22.07■■□□□ 1.12
CTNS-206ENST00000488623 PPP6R1Q9UPN7 881 aa22.07■■□□□ 1.12
CTNS-206ENST00000488623 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
CTNS-206ENST00000488623 ABCC3O15438 1527 aa22.06■■□□□ 1.12
CTNS-206ENST00000488623 E9PCH4 1651 aa22.04■■□□□ 1.12
CTNS-206ENST00000488623 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
CTNS-206ENST00000488623 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
CTNS-206ENST00000488623 PLA2R1Q13018 1463 aa22.01■■□□□ 1.11
CTNS-206ENST00000488623 EFCAB6Q5THR3 1501 aa22■■□□□ 1.11
CTNS-206ENST00000488623 ZC3H13Q5T200 1668 aaKnown RBP21.99■■□□□ 1.11
CTNS-206ENST00000488623 LMTK3Q96Q04 1460 aa21.99■■□□□ 1.11
CTNS-206ENST00000488623 CAMSAP1Q5T5Y3 1602 aa21.98■■□□□ 1.11
CTNS-206ENST00000488623 PTPRTO14522 1441 aa21.97■■□□□ 1.11
CTNS-206ENST00000488623 CFAP65Q6ZU64 1925 aaKnown RBP21.96■■□□□ 1.11
CTNS-206ENST00000488623 NPATQ14207 1427 aa21.96■■□□□ 1.11
CTNS-206ENST00000488623 ARHGAP31Q2M1Z3 1444 aa21.96■■□□□ 1.11
CTNS-206ENST00000488623 CLTCQ00610 1675 aaKnown RBP21.95■■□□□ 1.1
CTNS-206ENST00000488623 RPRD2Q5VT52 1461 aaKnown RBP21.94■■□□□ 1.1
CTNS-206ENST00000488623 SPHKAPQ2M3C7 1700 aa21.92■■□□□ 1.1
CTNS-206ENST00000488623 ESF1Q9H501 851 aaKnown RBP21.92■■□□□ 1.1
CTNS-206ENST00000488623 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
CTNS-206ENST00000488623 PREX1Q8TCU6 1659 aa21.91■■□□□ 1.1
CTNS-206ENST00000488623 C3P01024 1663 aa21.91■■□□□ 1.1
CTNS-206ENST00000488623 SETD1BQ9UPS6 1966 aaKnown RBP21.9■■□□□ 1.1
CTNS-206ENST00000488623 ZMYM3Q14202 1370 aa21.89■■□□□ 1.1
CTNS-206ENST00000488623 TRPM2O94759 1503 aa21.89■■□□□ 1.09
CTNS-206ENST00000488623 CCDC144AA2RUR9 1427 aa21.89■■□□□ 1.09
CTNS-206ENST00000488623 CEBPAP49715 358 aaPredicted RBP21.88■■□□□ 1.09
CTNS-206ENST00000488623 FBXO31Q5XUX0 539 aaPredicted RBP21.88■■□□□ 1.09
CTNS-206ENST00000488623 NOS1P29475 1434 aa21.88■■□□□ 1.09
CTNS-206ENST00000488623 CNTLNQ9NXG0 1405 aa21.87■■□□□ 1.09
CTNS-206ENST00000488623 TONSLQ96HA7 1378 aa21.87■■□□□ 1.09
CTNS-206ENST00000488623 HSPA2P54652 639 aa21.85■■□□□ 1.09
CTNS-206ENST00000488623 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
CTNS-206ENST00000488623 CLTCL1P53675 1640 aa21.84■■□□□ 1.09
CTNS-206ENST00000488623 PPP1R15AO75807 674 aaPredicted RBP21.83■■□□□ 1.09
CTNS-206ENST00000488623 MROH2AA6NES4 1674 aa21.82■■□□□ 1.08
CTNS-206ENST00000488623 ERVK-7P63135 1459 aa21.82■■□□□ 1.08
CTNS-206ENST00000488623 SYNMO15061 1565 aa21.82■■□□□ 1.08
CTNS-206ENST00000488623 UGGT1Q9NYU2 1555 aa21.82■■□□□ 1.08
CTNS-206ENST00000488623 ILDR1Q86SU0 546 aaPredicted RBP21.79■■□□□ 1.08
CTNS-206ENST00000488623 IDI1Q13907 227 aa21.78■■□□□ 1.08
CTNS-206ENST00000488623 RGL3Q3MIN7 710 aa21.78■■□□□ 1.08
CTNS-206ENST00000488623 SPATA31E1Q6ZUB1 1445 aa21.78■■□□□ 1.08
CTNS-206ENST00000488623 SPATA31D1Q6ZQQ2 1576 aa21.78■■□□□ 1.08
CTNS-206ENST00000488623 SLC52A1Q9NWF4 448 aa21.77■■□□□ 1.08
CTNS-206ENST00000488623 PIK3C2BO00750 1634 aa21.77■■□□□ 1.07
CTNS-206ENST00000488623 UHRF1BP1Q6BDS2 1440 aa21.76■■□□□ 1.07
CTNS-206ENST00000488623 KIF1BO60333 1816 aa21.75■■□□□ 1.07
CTNS-206ENST00000488623 STRCQ7RTU9 1775 aa21.72■■□□□ 1.07
CTNS-206ENST00000488623 CHGAP10645 457 aaKnown RBP21.72■■□□□ 1.07
CTNS-206ENST00000488623 DCAF11Q8TEB1 546 aa21.72■■□□□ 1.07
CTNS-206ENST00000488623 NEURL4Q96JN8 1562 aa21.71■■□□□ 1.07
CTNS-206ENST00000488623 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
CTNS-206ENST00000488623 TNRQ92752 1358 aa21.71■■□□□ 1.07
CTNS-206ENST00000488623 NBPF8Q3BBV2 869 aa21.69■■□□□ 1.06
CTNS-206ENST00000488623 ADGRB3O60242 1522 aa21.68■■□□□ 1.06
CTNS-206ENST00000488623 ZNF326Q5BKZ1 582 aaKnown RBP21.65■■□□□ 1.06
CTNS-206ENST00000488623 TMEM131LA2VDJ0 1609 aa21.65■■□□□ 1.06
CTNS-206ENST00000488623 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.05
CTNS-206ENST00000488623 MYO3AQ8NEV4 1616 aa21.63■■□□□ 1.05
CTNS-206ENST00000488623 RPGRIP1LQ68CZ1 1315 aa21.62■■□□□ 1.05
CTNS-206ENST00000488623 STAC3Q96MF2 364 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms