RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 NISCHQ9Y2I1 1504 aa35.24■■■■□ 3.23
CTNS-206ENST00000488623 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
CTNS-206ENST00000488623 ABCC9O60706 1549 aa30.31■■■□□ 2.44
CTNS-206ENST00000488623 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
CTNS-206ENST00000488623 DCAF8L2P0C7V8 631 aa29.25■■■□□ 2.27
CTNS-206ENST00000488623 DCAF1Q9Y4B6 1507 aa29.14■■■□□ 2.25
CTNS-206ENST00000488623 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
CTNS-206ENST00000488623 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
CTNS-206ENST00000488623 NACADO15069 1562 aa28.91■■■□□ 2.22
CTNS-206ENST00000488623 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
CTNS-206ENST00000488623 SHROOM4Q9ULL8 1493 aa28.41■■■□□ 2.14
CTNS-206ENST00000488623 SCRIBQ14160 1630 aa28.35■■■□□ 2.13
CTNS-206ENST00000488623 PABPN1Q86U42 306 aaKnown RBP eCLIP28.22■■■□□ 2.11
CTNS-206ENST00000488623 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.1
CTNS-206ENST00000488623 BICRAQ9NZM4 1560 aa28.13■■■□□ 2.09
CTNS-206ENST00000488623 CC2D2AQ9P2K1 1620 aa27.43■■□□□ 1.98
CTNS-206ENST00000488623 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
CTNS-206ENST00000488623 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
CTNS-206ENST00000488623 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
CTNS-206ENST00000488623 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
CTNS-206ENST00000488623 RSF1Q96T23 1441 aaPredicted RBP27.18■■□□□ 1.94
CTNS-206ENST00000488623 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
CTNS-206ENST00000488623 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.94
CTNS-206ENST00000488623 WIZO95785 1651 aa26.96■■□□□ 1.91
CTNS-206ENST00000488623 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
CTNS-206ENST00000488623 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
CTNS-206ENST00000488623 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
CTNS-206ENST00000488623 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
CTNS-206ENST00000488623 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
CTNS-206ENST00000488623 BAZ1BQ9UIG0 1483 aaKnown RBP26.64■■□□□ 1.86
CTNS-206ENST00000488623 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
CTNS-206ENST00000488623 CCDC88BA6NC98 1476 aa26.41■■□□□ 1.82
CTNS-206ENST00000488623 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
CTNS-206ENST00000488623 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
CTNS-206ENST00000488623 NESP48681 1621 aa26.11■■□□□ 1.77
CTNS-206ENST00000488623 CUX2O14529 1486 aa26■■□□□ 1.75
CTNS-206ENST00000488623 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
CTNS-206ENST00000488623 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
CTNS-206ENST00000488623 CFTRP13569 1480 aa25.98■■□□□ 1.75
CTNS-206ENST00000488623 KIF21AQ7Z4S6 1674 aa25.88■■□□□ 1.73
CTNS-206ENST00000488623 THOC2Q8NI27 1593 aaKnown RBP25.84■■□□□ 1.73
CTNS-206ENST00000488623 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
CTNS-206ENST00000488623 PRDM2Q13029 1718 aa25.79■■□□□ 1.72
CTNS-206ENST00000488623 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
CTNS-206ENST00000488623 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
CTNS-206ENST00000488623 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
CTNS-206ENST00000488623 DNAJC5Q9H3Z4 198 aa25.64■■□□□ 1.7
CTNS-206ENST00000488623 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
CTNS-206ENST00000488623 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
CTNS-206ENST00000488623 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
CTNS-206ENST00000488623 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
CTNS-206ENST00000488623 WDR62O43379 1518 aa25.51■■□□□ 1.67
CTNS-206ENST00000488623 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
CTNS-206ENST00000488623 CUX1P39880 1505 aa25.47■■□□□ 1.67
CTNS-206ENST00000488623 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
CTNS-206ENST00000488623 BIVM-ERCC5R4GMW8 1640 aa25.4■■□□□ 1.66
CTNS-206ENST00000488623 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
CTNS-206ENST00000488623 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
CTNS-206ENST00000488623 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
CTNS-206ENST00000488623 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
CTNS-206ENST00000488623 POLA1P09884 1462 aaPredicted RBP25.18■■□□□ 1.62
CTNS-206ENST00000488623 SOGA1O94964 1423 aa25.13■■□□□ 1.61
CTNS-206ENST00000488623 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
CTNS-206ENST00000488623 RUSC2Q8N2Y8 1516 aa25.08■■□□□ 1.61
CTNS-206ENST00000488623 FAM9AQ8IZU1 332 aaPredicted RBP25.08■■□□□ 1.61
CTNS-206ENST00000488623 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
CTNS-206ENST00000488623 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
CTNS-206ENST00000488623 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
CTNS-206ENST00000488623 EEA1Q15075 1411 aa24.97■■□□□ 1.59
CTNS-206ENST00000488623 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
CTNS-206ENST00000488623 WDR97A6NE52 1622 aa24.96■■□□□ 1.59
CTNS-206ENST00000488623 ZNF608Q9ULD9 1512 aaPredicted RBP24.93■■□□□ 1.58
CTNS-206ENST00000488623 CSRNP3Q8WYN3 585 aa24.93■■□□□ 1.58
CTNS-206ENST00000488623 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
CTNS-206ENST00000488623 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
CTNS-206ENST00000488623 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.57
CTNS-206ENST00000488623 IGF1RP08069 1367 aa24.84■■□□□ 1.57
CTNS-206ENST00000488623 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
CTNS-206ENST00000488623 OSCARQ8IYS5 282 aa24.83■■□□□ 1.57
CTNS-206ENST00000488623 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.56
CTNS-206ENST00000488623 LOC105371045A0A1W2PR82 267 aa24.8■■□□□ 1.56
CTNS-206ENST00000488623 EHMT2Q96KQ7 1210 aa24.72■■□□□ 1.55
CTNS-206ENST00000488623 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
CTNS-206ENST00000488623 PRXQ9BXM0 1461 aa24.7■■□□□ 1.55
CTNS-206ENST00000488623 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
CTNS-206ENST00000488623 CARMIL1Q5VZK9 1371 aa24.69■■□□□ 1.54
CTNS-206ENST00000488623 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
CTNS-206ENST00000488623 CHD1O14646 1710 aa24.69■■□□□ 1.54
CTNS-206ENST00000488623 KIF21BO75037 1637 aa24.66■■□□□ 1.54
CTNS-206ENST00000488623 RAPGEF2Q9Y4G8 1499 aa24.62■■□□□ 1.53
CTNS-206ENST00000488623 CUL7Q14999 1698 aa24.62■■□□□ 1.53
CTNS-206ENST00000488623 GOLGA3Q08378 1498 aa24.6■■□□□ 1.53
CTNS-206ENST00000488623 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
CTNS-206ENST00000488623 RIMBP3CA6NJZ7 1639 aa24.57■■□□□ 1.52
CTNS-206ENST00000488623 RIMBP3BA6NNM3 1639 aa24.57■■□□□ 1.52
CTNS-206ENST00000488623 RIMBP3Q9UFD9 1639 aa24.57■■□□□ 1.52
CTNS-206ENST00000488623 FHAD1B1AJZ9 1412 aa24.56■■□□□ 1.52
CTNS-206ENST00000488623 UBTFP17480 764 aaKnown RBP24.54■■□□□ 1.52
CTNS-206ENST00000488623 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
CTNS-206ENST00000488623 MAGI1Q96QZ7 1491 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms