RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 KIF3BO15066 747 aa23.5■■□□□ 1.35
TM2D1-208ENST00000488206 MROH1Q8NDA8 1641 aa23.49■■□□□ 1.35
TM2D1-208ENST00000488206 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
TM2D1-208ENST00000488206 ADAMTSL3P82987 1691 aa23.45■■□□□ 1.34
TM2D1-208ENST00000488206 ZC3H13Q5T200 1668 aaKnown RBP23.45■■□□□ 1.34
TM2D1-208ENST00000488206 FER1L4A9Z1Z3 1794 aa23.45■■□□□ 1.34
TM2D1-208ENST00000488206 KDM5DQ9BY66 1539 aa23.44■■□□□ 1.34
TM2D1-208ENST00000488206 MLECQ14165 292 aa23.44■■□□□ 1.34
TM2D1-208ENST00000488206 MADDQ8WXG6 1647 aa23.43■■□□□ 1.34
TM2D1-208ENST00000488206 KANK1Q14678 1352 aa23.42■■□□□ 1.34
TM2D1-208ENST00000488206 GGT6Q6P531 493 aa23.42■■□□□ 1.34
TM2D1-208ENST00000488206 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
TM2D1-208ENST00000488206 RAB3GAP2Q9H2M9 1393 aa23.41■■□□□ 1.34
TM2D1-208ENST00000488206 VWDEQ8N2E2 1590 aa23.41■■□□□ 1.34
TM2D1-208ENST00000488206 CNTLNQ9NXG0 1405 aa23.41■■□□□ 1.34
TM2D1-208ENST00000488206 ABCC3O15438 1527 aa23.4■■□□□ 1.34
TM2D1-208ENST00000488206 ACIN1Q9UKV3 1341 aaKnown RBP23.39■■□□□ 1.34
TM2D1-208ENST00000488206 IQGAP3Q86VI3 1631 aa23.39■■□□□ 1.33
TM2D1-208ENST00000488206 MROH2AA6NES4 1674 aa23.38■■□□□ 1.33
TM2D1-208ENST00000488206 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
TM2D1-208ENST00000488206 CEP152O94986 1710 aa23.37■■□□□ 1.33
TM2D1-208ENST00000488206 RIMS1Q86UR5 1692 aaKnown RBP23.37■■□□□ 1.33
TM2D1-208ENST00000488206 LMTK2Q8IWU2 1503 aa23.37■■□□□ 1.33
TM2D1-208ENST00000488206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.36■■□□□ 1.33
TM2D1-208ENST00000488206 ESF1Q9H501 851 aaKnown RBP23.36■■□□□ 1.33
TM2D1-208ENST00000488206 CAMSAP1Q5T5Y3 1602 aa23.34■■□□□ 1.33
TM2D1-208ENST00000488206 NUP155O75694 1391 aa23.34■■□□□ 1.33
TM2D1-208ENST00000488206 WASHC2CQ9Y4E1 1318 aa23.33■■□□□ 1.33
TM2D1-208ENST00000488206 TET3O43151 1660 aa23.33■■□□□ 1.33
TM2D1-208ENST00000488206 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
TM2D1-208ENST00000488206 HRCP23327 699 aa23.32■■□□□ 1.32
TM2D1-208ENST00000488206 EFCAB6Q5THR3 1501 aa23.31■■□□□ 1.32
TM2D1-208ENST00000488206 TRIM52Q96A61 297 aa23.29■■□□□ 1.32
TM2D1-208ENST00000488206 PZPP20742 1482 aa23.28■■□□□ 1.32
TM2D1-208ENST00000488206 C3P01024 1663 aa23.26■■□□□ 1.31
TM2D1-208ENST00000488206 PTPRMP28827 1452 aa23.26■■□□□ 1.31
TM2D1-208ENST00000488206 KDM4FA0A1W2PPD8 638 aa23.26■■□□□ 1.31
TM2D1-208ENST00000488206 ARHGAP31Q2M1Z3 1444 aa23.25■■□□□ 1.31
TM2D1-208ENST00000488206 RPRD2Q5VT52 1461 aaKnown RBP23.24■■□□□ 1.31
TM2D1-208ENST00000488206 ZMYM3Q14202 1370 aa23.24■■□□□ 1.31
TM2D1-208ENST00000488206 NPATQ14207 1427 aa23.22■■□□□ 1.31
TM2D1-208ENST00000488206 E9PCH4 1651 aa23.22■■□□□ 1.31
TM2D1-208ENST00000488206 SLC4A1APQ9BWU0 796 aaKnown RBP23.19■■□□□ 1.3
TM2D1-208ENST00000488206 PREX1Q8TCU6 1659 aa23.18■■□□□ 1.3
TM2D1-208ENST00000488206 ERVK-7P63135 1459 aa23.17■■□□□ 1.3
TM2D1-208ENST00000488206 SPATA31D1Q6ZQQ2 1576 aa23.17■■□□□ 1.3
TM2D1-208ENST00000488206 MPHOSPH9Q99550 1183 aa23.15■■□□□ 1.3
TM2D1-208ENST00000488206 SPHKAPQ2M3C7 1700 aa23.13■■□□□ 1.29
TM2D1-208ENST00000488206 NOS1P29475 1434 aa23.12■■□□□ 1.29
TM2D1-208ENST00000488206 CEBPAP49715 358 aaPredicted RBP23.12■■□□□ 1.29
TM2D1-208ENST00000488206 PKD2Q13563 968 aa23.12■■□□□ 1.29
TM2D1-208ENST00000488206 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
TM2D1-208ENST00000488206 TNRQ92752 1358 aa23.1■■□□□ 1.29
TM2D1-208ENST00000488206 TRPM2O94759 1503 aa23.09■■□□□ 1.29
TM2D1-208ENST00000488206 SYNMO15061 1565 aa23.09■■□□□ 1.29
TM2D1-208ENST00000488206 PTPRTO14522 1441 aa23.08■■□□□ 1.29
TM2D1-208ENST00000488206 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.29
TM2D1-208ENST00000488206 FBXO31Q5XUX0 539 aaPredicted RBP23.08■■□□□ 1.29
TM2D1-208ENST00000488206 DHX57Q6P158 1386 aaKnown RBP23.05■■□□□ 1.28
TM2D1-208ENST00000488206 CFAP65Q6ZU64 1925 aaKnown RBP23.05■■□□□ 1.28
TM2D1-208ENST00000488206 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
TM2D1-208ENST00000488206 PIK3C2BO00750 1634 aa23.04■■□□□ 1.28
TM2D1-208ENST00000488206 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
TM2D1-208ENST00000488206 PLA2R1Q13018 1463 aa23.02■■□□□ 1.28
TM2D1-208ENST00000488206 UHRF1BP1Q6BDS2 1440 aa23.01■■□□□ 1.27
TM2D1-208ENST00000488206 FOXD1Q16676 465 aa23.01■■□□□ 1.27
TM2D1-208ENST00000488206 SENP3Q9H4L4 574 aaPredicted RBP23.01■■□□□ 1.27
TM2D1-208ENST00000488206 SETD1BQ9UPS6 1966 aaKnown RBP23.01■■□□□ 1.27
TM2D1-208ENST00000488206 CEP170BQ9Y4F5 1589 aaPredicted RBP23■■□□□ 1.27
TM2D1-208ENST00000488206 CLTCL1P53675 1640 aa23■■□□□ 1.27
TM2D1-208ENST00000488206 UGGT1Q9NYU2 1555 aa22.99■■□□□ 1.27
TM2D1-208ENST00000488206 A2ML1A8K2U0 1454 aa22.98■■□□□ 1.27
TM2D1-208ENST00000488206 SLC52A1Q9NWF4 448 aa22.98■■□□□ 1.27
TM2D1-208ENST00000488206 ANKRD30BQ9BXX2 1392 aa22.97■■□□□ 1.27
TM2D1-208ENST00000488206 CCDC144AA2RUR9 1427 aa22.97■■□□□ 1.27
TM2D1-208ENST00000488206 ADGRB3O60242 1522 aa22.97■■□□□ 1.27
TM2D1-208ENST00000488206 KDM5AP29375 1690 aaKnown RBP22.96■■□□□ 1.27
TM2D1-208ENST00000488206 UBR1Q8IWV7 1749 aa22.92■■□□□ 1.26
TM2D1-208ENST00000488206 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
TM2D1-208ENST00000488206 KIF1BO60333 1816 aa22.91■■□□□ 1.26
TM2D1-208ENST00000488206 IDI1Q13907 227 aa22.9■■□□□ 1.26
TM2D1-208ENST00000488206 TMEM131LA2VDJ0 1609 aa22.9■■□□□ 1.26
TM2D1-208ENST00000488206 NEURL4Q96JN8 1562 aa22.89■■□□□ 1.25
TM2D1-208ENST00000488206 STAG3Q9UJ98 1225 aa22.86■■□□□ 1.25
TM2D1-208ENST00000488206 CLSPNQ9HAW4 1339 aa22.84■■□□□ 1.25
TM2D1-208ENST00000488206 MYO5BQ9ULV0 1848 aa22.84■■□□□ 1.25
TM2D1-208ENST00000488206 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
TM2D1-208ENST00000488206 CHGAP10645 457 aaKnown RBP22.82■■□□□ 1.24
TM2D1-208ENST00000488206 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
TM2D1-208ENST00000488206 SLIT1O75093 1534 aa22.82■■□□□ 1.24
TM2D1-208ENST00000488206 THEMISQ8N1K5 641 aaPredicted RBP22.81■■□□□ 1.24
TM2D1-208ENST00000488206 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
TM2D1-208ENST00000488206 TMEM2Q9UHN6 1383 aa22.78■■□□□ 1.24
TM2D1-208ENST00000488206 NEXMIFQ5QGS0 1516 aa22.76■■□□□ 1.23
TM2D1-208ENST00000488206 ZFYVE9O95405 1425 aa22.75■■□□□ 1.23
TM2D1-208ENST00000488206 RIMS2Q9UQ26 1411 aa22.75■■□□□ 1.23
TM2D1-208ENST00000488206 ZNF326Q5BKZ1 582 aaKnown RBP22.75■■□□□ 1.23
TM2D1-208ENST00000488206 POLR1AO95602 1720 aaPredicted RBP22.74■■□□□ 1.23
TM2D1-208ENST00000488206 IFT172Q9UG01 1749 aa22.74■■□□□ 1.23
TM2D1-208ENST00000488206 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms