RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 TSPY10P0CW01 314 aa13.24□□□□□ -0.29
TMF1-203ENST00000488010 DISP1Q96F81 1524 aa13.23□□□□□ -0.29
TMF1-203ENST00000488010 GPATCH8Q9UKJ3 1502 aaKnown RBP13.23□□□□□ -0.29
TMF1-203ENST00000488010 RAPGEF6Q8TEU7 1601 aa13.22□□□□□ -0.29
TMF1-203ENST00000488010 PLB1Q6P1J6 1458 aa13.22□□□□□ -0.29
TMF1-203ENST00000488010 KIAA0556O60303 1618 aa13.22□□□□□ -0.29
TMF1-203ENST00000488010 PDE3BQ13370 1112 aa13.21□□□□□ -0.29
TMF1-203ENST00000488010 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.29
TMF1-203ENST00000488010 DAXXQ9UER7 740 aaPredicted RBP13.21□□□□□ -0.29
TMF1-203ENST00000488010 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.29
TMF1-203ENST00000488010 ZNF608Q9ULD9 1512 aaPredicted RBP13.21□□□□□ -0.29
TMF1-203ENST00000488010 MS4A1P11836 297 aa13.21□□□□□ -0.3
TMF1-203ENST00000488010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.32e-7■■□□□ 12.3
TMF1-203ENST00000488010 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
TMF1-203ENST00000488010 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
TMF1-203ENST00000488010 KIAA0586Q9BVV6 1533 aa13.2□□□□□ -0.3
TMF1-203ENST00000488010 C20orf194Q5TEA3 1177 aa13.2□□□□□ -0.3
TMF1-203ENST00000488010 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
TMF1-203ENST00000488010 PANK3Q9H999 370 aa13.18□□□□□ -0.3
TMF1-203ENST00000488010 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
TMF1-203ENST00000488010 ADGBQ8N7X0 1667 aa13.18□□□□□ -0.3
TMF1-203ENST00000488010 C9orf84Q5VXU9 1444 aa13.18□□□□□ -0.3
TMF1-203ENST00000488010 DDRGK1Q96HY6 314 aa13.17□□□□□ -0.3
TMF1-203ENST00000488010 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
TMF1-203ENST00000488010 USP35Q9P2H5 1018 aa13.17□□□□□ -0.3
TMF1-203ENST00000488010 PARD3Q8TEW0 1356 aa13.17□□□□□ -0.3
TMF1-203ENST00000488010 ADGRL2O95490 1459 aa13.16□□□□□ -0.3
TMF1-203ENST00000488010 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.3
TMF1-203ENST00000488010 PER1O15534 1290 aaPredicted RBP13.15□□□□□ -0.3
TMF1-203ENST00000488010 RGS3P49796 1198 aa13.15□□□□□ -0.3
TMF1-203ENST00000488010 BRPF3Q9ULD4 1205 aa13.14□□□□□ -0.31
TMF1-203ENST00000488010 ARHGEF12Q9NZN5 1544 aa13.14□□□□□ -0.31
TMF1-203ENST00000488010 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
TMF1-203ENST00000488010 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
TMF1-203ENST00000488010 DISP3Q9P2K9 1392 aa13.13□□□□□ -0.31
TMF1-203ENST00000488010 NFKBIBQ15653 356 aa13.12□□□□□ -0.31
TMF1-203ENST00000488010 CCDC144AA2RUR9 1427 aa13.12□□□□□ -0.31
TMF1-203ENST00000488010 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
TMF1-203ENST00000488010 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
TMF1-203ENST00000488010 GSE1Q14687 1217 aa13.11□□□□□ -0.31
TMF1-203ENST00000488010 MRC2Q9UBG0 1479 aa13.1□□□□□ -0.31
TMF1-203ENST00000488010 CROCC2H7BZ55 1655 aa13.1□□□□□ -0.31
TMF1-203ENST00000488010 TMF1P82094 1093 aa13.1□□□□□ -0.31
TMF1-203ENST00000488010 JPH4Q96JJ6 628 aa13.1□□□□□ -0.31
TMF1-203ENST00000488010 PRAG1Q86YV5 1406 aa13.09□□□□□ -0.31
TMF1-203ENST00000488010 FRAT1Q92837 279 aaPredicted RBP13.08□□□□□ -0.32
TMF1-203ENST00000488010 TESK2Q96S53 571 aa13.08□□□□□ -0.32
TMF1-203ENST00000488010 E9PCH4 1651 aa13.08□□□□□ -0.32
TMF1-203ENST00000488010 CENPQQ7L2Z9 268 aaPredicted RBP13.07□□□□□ -0.32
TMF1-203ENST00000488010 CCDC146Q8IYE0 955 aa13.07□□□□□ -0.32
TMF1-203ENST00000488010 WASHC2CQ9Y4E1 1318 aa13.07□□□□□ -0.32
TMF1-203ENST00000488010 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
TMF1-203ENST00000488010 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
TMF1-203ENST00000488010 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
TMF1-203ENST00000488010 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
TMF1-203ENST00000488010 IFT140Q96RY7 1462 aa13.07□□□□□ -0.32
TMF1-203ENST00000488010 BLMP54132 1417 aaPredicted RBP13.06□□□□□ -0.32
TMF1-203ENST00000488010 ERBINQ96RT1 1412 aa13.06□□□□□ -0.32
TMF1-203ENST00000488010 KDM5DQ9BY66 1539 aa13.05□□□□□ -0.32
TMF1-203ENST00000488010 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
TMF1-203ENST00000488010 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
TMF1-203ENST00000488010 KDM2BQ8NHM5 1336 aa13.05□□□□□ -0.32
TMF1-203ENST00000488010 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
TMF1-203ENST00000488010 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.04□□□□□ -0.32
TMF1-203ENST00000488010 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
TMF1-203ENST00000488010 FRAT2O75474 233 aaPredicted RBP13.04□□□□□ -0.32
TMF1-203ENST00000488010 DUSP27Q5VZP5 1158 aa13.04□□□□□ -0.32
TMF1-203ENST00000488010 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
TMF1-203ENST00000488010 COL17A1Q9UMD9 1497 aaPredicted RBP13.04□□□□□ -0.32
TMF1-203ENST00000488010 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
TMF1-203ENST00000488010 C8orf34Q49A92 452 aa13.04□□□□□ -0.32
TMF1-203ENST00000488010 SHANK2Q9UPX8 1470 aa13.03□□□□□ -0.32
TMF1-203ENST00000488010 A2MP01023 1474 aa13.02□□□□□ -0.33
TMF1-203ENST00000488010 ZMYM4Q5VZL5 1548 aa13.02□□□□□ -0.33
TMF1-203ENST00000488010 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.33
TMF1-203ENST00000488010 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.33
TMF1-203ENST00000488010 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.33
TMF1-203ENST00000488010 PTPRGP23470 1445 aa13.02□□□□□ -0.33
TMF1-203ENST00000488010 ATP10BO94823 1461 aa13.02□□□□□ -0.33
TMF1-203ENST00000488010 ABCC10Q5T3U5 1492 aa13.01□□□□□ -0.33
TMF1-203ENST00000488010 BCAR3O75815 825 aa13□□□□□ -0.33
TMF1-203ENST00000488010 EIF4G3O43432 1585 aaKnown RBP13□□□□□ -0.33
TMF1-203ENST00000488010 APAF1O14727 1248 aa12.99□□□□□ -0.33
TMF1-203ENST00000488010 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
TMF1-203ENST00000488010 PLEKHH2Q8IVE3 1493 aa12.99□□□□□ -0.33
TMF1-203ENST00000488010 GPRASP1Q5JY77 1395 aa12.98□□□□□ -0.33
TMF1-203ENST00000488010 PLA2R1Q13018 1463 aa12.98□□□□□ -0.33
TMF1-203ENST00000488010 CCDC141Q6ZP82 1450 aa12.98□□□□□ -0.33
TMF1-203ENST00000488010 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
TMF1-203ENST00000488010 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
TMF1-203ENST00000488010 ARXQ96QS3 562 aa12.96□□□□□ -0.33
TMF1-203ENST00000488010 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
TMF1-203ENST00000488010 MAGI2Q86UL8 1455 aa12.95□□□□□ -0.34
TMF1-203ENST00000488010 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
TMF1-203ENST00000488010 SYNJ2O15056 1496 aa12.95□□□□□ -0.34
TMF1-203ENST00000488010 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
TMF1-203ENST00000488010 IGHDP01880 384 aa12.95□□□□□ -0.34
TMF1-203ENST00000488010 NEUROD2Q15784 382 aa12.95□□□□□ -0.34
TMF1-203ENST00000488010 INSRP06213 1382 aa12.94□□□□□ -0.34
TMF1-203ENST00000488010 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms