RNA–Protein interactions for RNA: ENST00000486946.1

AGAP3-220, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-220ENST00000486946 THEMISQ8N1K5 641 aaPredicted RBP19.13■□□□□ 0.65
AGAP3-220ENST00000486946 LRRC7Q96NW7 1537 aa19.12■□□□□ 0.65
AGAP3-220ENST00000486946 FBXO31Q5XUX0 539 aaPredicted RBP19.12■□□□□ 0.65
AGAP3-220ENST00000486946 RNF17Q9BXT8 1623 aaKnown RBP19.11■□□□□ 0.65
AGAP3-220ENST00000486946 MED14O60244 1454 aa19.11■□□□□ 0.65
AGAP3-220ENST00000486946 INO80Q9ULG1 1556 aaPredicted RBP19.1■□□□□ 0.65
AGAP3-220ENST00000486946 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.64
AGAP3-220ENST00000486946 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.64
AGAP3-220ENST00000486946 DEPDC5O75140 1603 aa19.07■□□□□ 0.64
AGAP3-220ENST00000486946 CCDC18Q5T9S5 1454 aa19.07■□□□□ 0.64
AGAP3-220ENST00000486946 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
AGAP3-220ENST00000486946 SYNMO15061 1565 aa19.06■□□□□ 0.64
AGAP3-220ENST00000486946 PLEKHH2Q8IVE3 1493 aa19.05■□□□□ 0.64
AGAP3-220ENST00000486946 FAM135AQ9P2D6 1515 aa19.05■□□□□ 0.64
AGAP3-220ENST00000486946 IQGAP1P46940 1657 aa19.05■□□□□ 0.64
AGAP3-220ENST00000486946 PZPP20742 1482 aa19.04■□□□□ 0.64
AGAP3-220ENST00000486946 UGGT1Q9NYU2 1555 aa19.04■□□□□ 0.64
AGAP3-220ENST00000486946 ADGBQ8N7X0 1667 aa19.04■□□□□ 0.64
AGAP3-220ENST00000486946 GPATCH8Q9UKJ3 1502 aaKnown RBP19.04■□□□□ 0.64
AGAP3-220ENST00000486946 MIA2Q96PC5 1412 aa19.03■□□□□ 0.64
AGAP3-220ENST00000486946 NLRP1Q9C000 1473 aa19.03■□□□□ 0.64
AGAP3-220ENST00000486946 CFDP1Q9UEE9 299 aaPredicted RBP19.01■□□□□ 0.63
AGAP3-220ENST00000486946 FYCO1Q9BQS8 1478 aa19■□□□□ 0.63
AGAP3-220ENST00000486946 SETD1AO15047 1707 aaKnown RBP19■□□□□ 0.63
AGAP3-220ENST00000486946 FAM135BQ49AJ0 1406 aa18.99■□□□□ 0.63
AGAP3-220ENST00000486946 DHX29Q7Z478 1369 aaKnown RBP18.98■□□□□ 0.63
AGAP3-220ENST00000486946 WASHC2CQ9Y4E1 1318 aa18.98■□□□□ 0.63
AGAP3-220ENST00000486946 KDM5DQ9BY66 1539 aa18.97■□□□□ 0.63
AGAP3-220ENST00000486946 KIF3BO15066 747 aa18.97■□□□□ 0.63
AGAP3-220ENST00000486946 UPF1Q92900 1129 aaKnown RBP eCLIP18.95■□□□□ 0.62
AGAP3-220ENST00000486946 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
AGAP3-220ENST00000486946 RTEL1-TNFRSF6BF6WH68 1400 aa18.92■□□□□ 0.62
AGAP3-220ENST00000486946 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
AGAP3-220ENST00000486946 XIRP1Q702N8 1843 aaKnown RBP18.88■□□□□ 0.61
AGAP3-220ENST00000486946 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
AGAP3-220ENST00000486946 MBD5Q9P267 1494 aa18.87■□□□□ 0.61
AGAP3-220ENST00000486946 SCAF11Q99590 1463 aaKnown RBP18.85■□□□□ 0.61
AGAP3-220ENST00000486946 ROBO1Q9Y6N7 1651 aa18.84■□□□□ 0.61
AGAP3-220ENST00000486946 LTKP29376 864 aa18.82■□□□□ 0.6
AGAP3-220ENST00000486946 TXNDC2Q86VQ3 553 aa18.82■□□□□ 0.6
AGAP3-220ENST00000486946 TRIM52Q96A61 297 aa18.82■□□□□ 0.6
AGAP3-220ENST00000486946 TMEM94Q12767 1356 aa18.81■□□□□ 0.6
AGAP3-220ENST00000486946 JCADQ9P266 1359 aa18.81■□□□□ 0.6
AGAP3-220ENST00000486946 TIAM1Q13009 1591 aa18.8■□□□□ 0.6
AGAP3-220ENST00000486946 MTUS2Q5JR59 1369 aa18.8■□□□□ 0.6
AGAP3-220ENST00000486946 ZNF772Q68DY9 489 aaPredicted RBP18.79■□□□□ 0.6
AGAP3-220ENST00000486946 ERVK-7P63135 1459 aa18.78■□□□□ 0.6
AGAP3-220ENST00000486946 LRRC9Q6ZRR7 1453 aa18.78■□□□□ 0.6
AGAP3-220ENST00000486946 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
AGAP3-220ENST00000486946 UBR1Q8IWV7 1749 aa18.77■□□□□ 0.6
AGAP3-220ENST00000486946 NCOA2Q15596 1464 aa18.77■□□□□ 0.59
AGAP3-220ENST00000486946 ARHGAP23Q9P227 1491 aa18.77■□□□□ 0.59
AGAP3-220ENST00000486946 EHBP1L1Q8N3D4 1523 aa18.76■□□□□ 0.59
AGAP3-220ENST00000486946 PROSER2Q86WR7 435 aaPredicted RBP18.76■□□□□ 0.59
AGAP3-220ENST00000486946 SLIT1O75093 1534 aa18.75■□□□□ 0.59
AGAP3-220ENST00000486946 MEX3CQ5U5Q3 659 aaKnown RBP18.75■□□□□ 0.59
AGAP3-220ENST00000486946 ABCC3O15438 1527 aa18.74■□□□□ 0.59
AGAP3-220ENST00000486946 CCDC141Q6ZP82 1450 aa18.74■□□□□ 0.59
AGAP3-220ENST00000486946 KCNA6P17658 529 aa18.74■□□□□ 0.59
AGAP3-220ENST00000486946 PHLPP1O60346 1717 aa18.74■□□□□ 0.59
AGAP3-220ENST00000486946 RXRBP28702 533 aa18.73■□□□□ 0.59
AGAP3-220ENST00000486946 RSPH4AQ5TD94 716 aa18.73■□□□□ 0.59
AGAP3-220ENST00000486946 RBM33Q96EV2 1170 aaKnown RBP18.72■□□□□ 0.59
AGAP3-220ENST00000486946 SLAIN2Q9P270 581 aa18.72■□□□□ 0.59
AGAP3-220ENST00000486946 MAP3K1Q13233 1512 aa18.72■□□□□ 0.59
AGAP3-220ENST00000486946 SPATA31A6Q5VVP1 1343 aa18.72■□□□□ 0.59
AGAP3-220ENST00000486946 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
AGAP3-220ENST00000486946 LRP6O75581 1613 aa18.7■□□□□ 0.58
AGAP3-220ENST00000486946 MSH6P52701 1360 aa18.69■□□□□ 0.58
AGAP3-220ENST00000486946 CFAP65Q6ZU64 1925 aaKnown RBP18.68■□□□□ 0.58
AGAP3-220ENST00000486946 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
AGAP3-220ENST00000486946 TSPY4P0CV99 314 aa18.67■□□□□ 0.58
AGAP3-220ENST00000486946 TSPY10P0CW01 314 aa18.67■□□□□ 0.58
AGAP3-220ENST00000486946 PRDM15P57071 1507 aaPredicted RBP18.67■□□□□ 0.58
AGAP3-220ENST00000486946 TMEM2Q9UHN6 1383 aa18.67■□□□□ 0.58
AGAP3-220ENST00000486946 FGD6Q6ZV73 1430 aa18.66■□□□□ 0.58
AGAP3-220ENST00000486946 COL16A1Q07092 1604 aaPredicted RBP18.65■□□□□ 0.58
AGAP3-220ENST00000486946 SLC26A8Q96RN1 970 aa18.65■□□□□ 0.58
AGAP3-220ENST00000486946 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
AGAP3-220ENST00000486946 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
AGAP3-220ENST00000486946 NKTRP30414 1462 aaKnown RBP18.63■□□□□ 0.57
AGAP3-220ENST00000486946 CEP152O94986 1710 aa18.6■□□□□ 0.57
AGAP3-220ENST00000486946 TET3O43151 1660 aa18.58■□□□□ 0.57
AGAP3-220ENST00000486946 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
AGAP3-220ENST00000486946 MROH1Q8NDA8 1641 aa18.58■□□□□ 0.56
AGAP3-220ENST00000486946 EIF2AK4Q9P2K8 1649 aaKnown RBP18.58■□□□□ 0.56
AGAP3-220ENST00000486946 ARHGEF5Q12774 1597 aa18.58■□□□□ 0.56
AGAP3-220ENST00000486946 NWD1Q149M9 1564 aa18.58■□□□□ 0.56
AGAP3-220ENST00000486946 ARHGAP31Q2M1Z3 1444 aa18.57■□□□□ 0.56
AGAP3-220ENST00000486946 FOXD1Q16676 465 aa18.56■□□□□ 0.56
AGAP3-220ENST00000486946 SRCAPQ6ZRS2 3230 aa18.55■□□□□ 0.56
AGAP3-220ENST00000486946 AFF2P51816 1311 aa18.55■□□□□ 0.56
AGAP3-220ENST00000486946 SHPRHQ149N8 1683 aa18.55■□□□□ 0.56
AGAP3-220ENST00000486946 NUTM2BA6NNL0 878 aaPredicted RBP18.55■□□□□ 0.56
AGAP3-220ENST00000486946 NUTM2EB1AL46 878 aaPredicted RBP18.55■□□□□ 0.56
AGAP3-220ENST00000486946 NUTM2AQ8IVF1 878 aaPredicted RBP18.55■□□□□ 0.56
AGAP3-220ENST00000486946 EFCAB6Q5THR3 1501 aa18.54■□□□□ 0.56
AGAP3-220ENST00000486946 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
AGAP3-220ENST00000486946 BCANQ96GW7 911 aa18.54■□□□□ 0.56
AGAP3-220ENST00000486946 ZRANB1Q9UGI0 708 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 266.3 ms