RNA–Protein interactions for RNA: ENST00000486946.1

AGAP3-220, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-220ENST00000486946 NISCHQ9Y2I1 1504 aa29.78■■■□□ 2.36
AGAP3-220ENST00000486946 ABCC9O60706 1549 aa27.93■■■□□ 2.06
AGAP3-220ENST00000486946 CCDC180Q9P1Z9 1646 aa27.06■■□□□ 1.92
AGAP3-220ENST00000486946 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
AGAP3-220ENST00000486946 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.79
AGAP3-220ENST00000486946 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
AGAP3-220ENST00000486946 NACADO15069 1562 aa25.82■■□□□ 1.72
AGAP3-220ENST00000486946 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
AGAP3-220ENST00000486946 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
AGAP3-220ENST00000486946 BICRAQ9NZM4 1560 aa25.45■■□□□ 1.66
AGAP3-220ENST00000486946 DNAJC5Q9H3Z4 198 aa25.43■■□□□ 1.66
AGAP3-220ENST00000486946 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
AGAP3-220ENST00000486946 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
AGAP3-220ENST00000486946 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
AGAP3-220ENST00000486946 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
AGAP3-220ENST00000486946 EIF4G1Q04637 1599 aaKnown RBP24.9■■□□□ 1.58
AGAP3-220ENST00000486946 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
AGAP3-220ENST00000486946 DCAF1Q9Y4B6 1507 aa24.54■■□□□ 1.52
AGAP3-220ENST00000486946 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
AGAP3-220ENST00000486946 CUX2O14529 1486 aa24.43■■□□□ 1.5
AGAP3-220ENST00000486946 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
AGAP3-220ENST00000486946 TRIM41Q8WV44 630 aa23.96■■□□□ 1.43
AGAP3-220ENST00000486946 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
AGAP3-220ENST00000486946 NESP48681 1621 aa23.75■■□□□ 1.39
AGAP3-220ENST00000486946 ATAD2BQ9ULI0 1458 aa23.66■■□□□ 1.38
AGAP3-220ENST00000486946 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
AGAP3-220ENST00000486946 HMGXB3Q12766 1538 aa23.58■■□□□ 1.36
AGAP3-220ENST00000486946 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
AGAP3-220ENST00000486946 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
AGAP3-220ENST00000486946 SMARCA4P51532 1647 aa23.4■■□□□ 1.34
AGAP3-220ENST00000486946 BAZ1BQ9UIG0 1483 aaKnown RBP23.39■■□□□ 1.34
AGAP3-220ENST00000486946 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
AGAP3-220ENST00000486946 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
AGAP3-220ENST00000486946 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
AGAP3-220ENST00000486946 BAZ1AQ9NRL2 1556 aaPredicted RBP23.21■■□□□ 1.31
AGAP3-220ENST00000486946 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
AGAP3-220ENST00000486946 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
AGAP3-220ENST00000486946 WDR62O43379 1518 aa23.14■■□□□ 1.3
AGAP3-220ENST00000486946 CADPSQ9ULU8 1353 aa23.11■■□□□ 1.29
AGAP3-220ENST00000486946 RIMBP3CA6NJZ7 1639 aa22.94■■□□□ 1.26
AGAP3-220ENST00000486946 RIMBP3BA6NNM3 1639 aa22.94■■□□□ 1.26
AGAP3-220ENST00000486946 RIMBP3Q9UFD9 1639 aa22.94■■□□□ 1.26
AGAP3-220ENST00000486946 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
AGAP3-220ENST00000486946 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
AGAP3-220ENST00000486946 FANCD2Q9BXW9 1451 aa22.84■■□□□ 1.25
AGAP3-220ENST00000486946 ARHGEF11O15085 1522 aa22.8■■□□□ 1.24
AGAP3-220ENST00000486946 TRHP20396 242 aaPredicted RBP22.77■■□□□ 1.24
AGAP3-220ENST00000486946 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
AGAP3-220ENST00000486946 CYB5RLQ6IPT4 315 aa22.73■■□□□ 1.23
AGAP3-220ENST00000486946 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
AGAP3-220ENST00000486946 CFTRP13569 1480 aa22.65■■□□□ 1.22
AGAP3-220ENST00000486946 WIZO95785 1651 aa22.6■■□□□ 1.21
AGAP3-220ENST00000486946 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
AGAP3-220ENST00000486946 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
AGAP3-220ENST00000486946 ARAP1Q96P48 1450 aa22.51■■□□□ 1.19
AGAP3-220ENST00000486946 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
AGAP3-220ENST00000486946 EIF4G3O43432 1585 aaKnown RBP22.35■■□□□ 1.17
AGAP3-220ENST00000486946 CHD1O14646 1710 aa22.34■■□□□ 1.17
AGAP3-220ENST00000486946 FBLN2P98095 1184 aa22.32■■□□□ 1.16
AGAP3-220ENST00000486946 TOPBP1Q92547 1522 aa22.3■■□□□ 1.16
AGAP3-220ENST00000486946 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
AGAP3-220ENST00000486946 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
AGAP3-220ENST00000486946 AQRO60306 1485 aaKnown RBP eCLIP22.26■■□□□ 1.151e-8■■□□□ 14.1
AGAP3-220ENST00000486946 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
AGAP3-220ENST00000486946 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
AGAP3-220ENST00000486946 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
AGAP3-220ENST00000486946 CLASP1Q7Z460 1538 aa22.08■■□□□ 1.13
AGAP3-220ENST00000486946 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
AGAP3-220ENST00000486946 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.12
AGAP3-220ENST00000486946 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
AGAP3-220ENST00000486946 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
AGAP3-220ENST00000486946 TDRD9Q8NDG6 1382 aaKnown RBP22■■□□□ 1.11
AGAP3-220ENST00000486946 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
AGAP3-220ENST00000486946 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
AGAP3-220ENST00000486946 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.1
AGAP3-220ENST00000486946 SOGA1O94964 1423 aa21.93■■□□□ 1.1
AGAP3-220ENST00000486946 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
AGAP3-220ENST00000486946 WDR97A6NE52 1622 aa21.86■■□□□ 1.09
AGAP3-220ENST00000486946 ILDR1Q86SU0 546 aaPredicted RBP21.85■■□□□ 1.09
AGAP3-220ENST00000486946 SYNJ2O15056 1496 aa21.84■■□□□ 1.09
AGAP3-220ENST00000486946 GRIN2BQ13224 1484 aa21.83■■□□□ 1.08
AGAP3-220ENST00000486946 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
AGAP3-220ENST00000486946 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
AGAP3-220ENST00000486946 KIF13AQ9H1H9 1805 aa21.64■■□□□ 1.06
AGAP3-220ENST00000486946 KDM4FA0A1W2PPD8 638 aa21.62■■□□□ 1.05
AGAP3-220ENST00000486946 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
AGAP3-220ENST00000486946 CUX1P39880 1505 aa21.6■■□□□ 1.05
AGAP3-220ENST00000486946 CEP170Q5SW79 1584 aa21.58■■□□□ 1.05
AGAP3-220ENST00000486946 GRIN2AQ12879 1464 aa21.53■■□□□ 1.04
AGAP3-220ENST00000486946 FAM69CQ0P6D2 419 aa21.53■■□□□ 1.04
AGAP3-220ENST00000486946 NUP160Q12769 1436 aa21.5■■□□□ 1.03
AGAP3-220ENST00000486946 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
AGAP3-220ENST00000486946 ABCC10Q5T3U5 1492 aa21.47■■□□□ 1.03
AGAP3-220ENST00000486946 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
AGAP3-220ENST00000486946 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
AGAP3-220ENST00000486946 KDM6BO15054 1643 aa21.41■■□□□ 1.02
AGAP3-220ENST00000486946 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
AGAP3-220ENST00000486946 ADAMTS12P58397 1594 aa21.39■■□□□ 1.01
AGAP3-220ENST00000486946 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
AGAP3-220ENST00000486946 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms