RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 KIF15Q9NS87 1388 aa26.49■■□□□ 1.83
PLD3-211ENST00000485448 C3P01024 1663 aa26.49■■□□□ 1.83
PLD3-211ENST00000485448 HSPA2P54652 639 aa26.48■■□□□ 1.83
PLD3-211ENST00000485448 DNMT1P26358 1616 aaKnown RBP26.48■■□□□ 1.83
PLD3-211ENST00000485448 DMRT2Q9Y5R5 561 aa26.47■■□□□ 1.83
PLD3-211ENST00000485448 CHIC2Q9UKJ5 165 aa26.46■■□□□ 1.83
PLD3-211ENST00000485448 PREX1Q8TCU6 1659 aa26.46■■□□□ 1.83
PLD3-211ENST00000485448 ERBINQ96RT1 1412 aa26.45■■□□□ 1.82
PLD3-211ENST00000485448 NCOA1Q15788 1441 aa26.43■■□□□ 1.82
PLD3-211ENST00000485448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.43■■□□□ 1.82
PLD3-211ENST00000485448 KDM5DQ9BY66 1539 aa26.43■■□□□ 1.82
PLD3-211ENST00000485448 CLTCQ00610 1675 aaKnown RBP26.43■■□□□ 1.82
PLD3-211ENST00000485448 EIF2AK4Q9P2K8 1649 aaKnown RBP26.43■■□□□ 1.82
PLD3-211ENST00000485448 PTPRKQ15262 1439 aa26.41■■□□□ 1.82
PLD3-211ENST00000485448 CROCC2H7BZ55 1655 aa26.4■■□□□ 1.82
PLD3-211ENST00000485448 PPARGC1BQ86YN6 1023 aaKnown RBP26.39■■□□□ 1.82
PLD3-211ENST00000485448 KANK1Q14678 1352 aa26.38■■□□□ 1.81
PLD3-211ENST00000485448 ADGRL2O95490 1459 aa26.37■■□□□ 1.81
PLD3-211ENST00000485448 RNF17Q9BXT8 1623 aaKnown RBP26.36■■□□□ 1.81
PLD3-211ENST00000485448 PZPP20742 1482 aa26.35■■□□□ 1.81
PLD3-211ENST00000485448 ROCK1Q13464 1354 aa26.32■■□□□ 1.8
PLD3-211ENST00000485448 FBXO31Q5XUX0 539 aaPredicted RBP26.32■■□□□ 1.8
PLD3-211ENST00000485448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.32■■□□□ 1.8
PLD3-211ENST00000485448 TNRQ92752 1358 aa26.3■■□□□ 1.8
PLD3-211ENST00000485448 ZC3H13Q5T200 1668 aaKnown RBP26.29■■□□□ 1.8
PLD3-211ENST00000485448 ANKRD50Q9ULJ7 1429 aa26.29■■□□□ 1.8
PLD3-211ENST00000485448 ABCC3O15438 1527 aa26.28■■□□□ 1.8
PLD3-211ENST00000485448 PKD2Q13563 968 aa26.26■■□□□ 1.79
PLD3-211ENST00000485448 ARHGAP31Q2M1Z3 1444 aa26.25■■□□□ 1.79
PLD3-211ENST00000485448 ITGAEP38570 1179 aa26.25■■□□□ 1.79
PLD3-211ENST00000485448 THEMISQ8N1K5 641 aaPredicted RBP26.25■■□□□ 1.79
PLD3-211ENST00000485448 PRDM15P57071 1507 aaPredicted RBP26.24■■□□□ 1.79
PLD3-211ENST00000485448 A2ML1A8K2U0 1454 aa26.23■■□□□ 1.79
PLD3-211ENST00000485448 NLRP1Q9C000 1473 aa26.23■■□□□ 1.79
PLD3-211ENST00000485448 RRBP1Q9P2E9 1410 aaKnown RBP26.23■■□□□ 1.79
PLD3-211ENST00000485448 MROH1Q8NDA8 1641 aa26.21■■□□□ 1.79
PLD3-211ENST00000485448 PTPRTO14522 1441 aa26.21■■□□□ 1.79
PLD3-211ENST00000485448 CEP170BQ9Y4F5 1589 aaPredicted RBP26.2■■□□□ 1.78
PLD3-211ENST00000485448 PLA2R1Q13018 1463 aa26.19■■□□□ 1.78
PLD3-211ENST00000485448 DEPDC5O75140 1603 aa26.18■■□□□ 1.78
PLD3-211ENST00000485448 MYO3AQ8NEV4 1616 aa26.18■■□□□ 1.78
PLD3-211ENST00000485448 CAMSAP1Q5T5Y3 1602 aa26.17■■□□□ 1.78
PLD3-211ENST00000485448 LMTK2Q8IWU2 1503 aa26.16■■□□□ 1.78
PLD3-211ENST00000485448 ZNF142P52746 1687 aaPredicted RBP26.16■■□□□ 1.78
PLD3-211ENST00000485448 ANKLE2Q86XL3 938 aa26.14■■□□□ 1.78
PLD3-211ENST00000485448 ERVK-7P63135 1459 aa26.14■■□□□ 1.78
PLD3-211ENST00000485448 SPATA31D1Q6ZQQ2 1576 aa26.14■■□□□ 1.78
PLD3-211ENST00000485448 NCKAP5LQ9HCH0 1330 aa26.12■■□□□ 1.77
PLD3-211ENST00000485448 STRCQ7RTU9 1775 aa26.12■■□□□ 1.77
PLD3-211ENST00000485448 VWDEQ8N2E2 1590 aa26.11■■□□□ 1.77
PLD3-211ENST00000485448 UGGT1Q9NYU2 1555 aa26.09■■□□□ 1.77
PLD3-211ENST00000485448 SLC52A1Q9NWF4 448 aa26.09■■□□□ 1.77
PLD3-211ENST00000485448 CEP152O94986 1710 aa26.08■■□□□ 1.77
PLD3-211ENST00000485448 RPRD2Q5VT52 1461 aaKnown RBP26.07■■□□□ 1.76
PLD3-211ENST00000485448 CERKQ8TCT0 537 aa26.06■■□□□ 1.76
PLD3-211ENST00000485448 STAG3Q9UJ98 1225 aa26.06■■□□□ 1.76
PLD3-211ENST00000485448 NUP155O75694 1391 aa26.05■■□□□ 1.76
PLD3-211ENST00000485448 FBXO41Q8TF61 875 aa26.04■■□□□ 1.76
PLD3-211ENST00000485448 EFCAB6Q5THR3 1501 aa26.01■■□□□ 1.75
PLD3-211ENST00000485448 ILDR1Q86SU0 546 aaPredicted RBP26.01■■□□□ 1.75
PLD3-211ENST00000485448 IDI1Q13907 227 aa26■■□□□ 1.75
PLD3-211ENST00000485448 EID1Q9Y6B2 187 aa26■■□□□ 1.75
PLD3-211ENST00000485448 NOS1P29475 1434 aa25.99■■□□□ 1.75
PLD3-211ENST00000485448 UNC13BO14795 1591 aa25.99■■□□□ 1.75
PLD3-211ENST00000485448 FOXD1Q16676 465 aa25.98■■□□□ 1.75
PLD3-211ENST00000485448 ACIN1Q9UKV3 1341 aaKnown RBP25.97■■□□□ 1.75
PLD3-211ENST00000485448 POTEDQ86YR6 584 aa25.97■■□□□ 1.75
PLD3-211ENST00000485448 HDGFP51858 240 aaKnown RBP25.96■■□□□ 1.75
PLD3-211ENST00000485448 NAIPQ13075 1403 aa25.95■■□□□ 1.74
PLD3-211ENST00000485448 CFAP65Q6ZU64 1925 aaKnown RBP25.95■■□□□ 1.74
PLD3-211ENST00000485448 TET3O43151 1660 aa25.94■■□□□ 1.74
PLD3-211ENST00000485448 TXNDC2Q86VQ3 553 aa25.94■■□□□ 1.74
PLD3-211ENST00000485448 HFM1A2PYH4 1435 aa25.94■■□□□ 1.74
PLD3-211ENST00000485448 MED14O60244 1454 aa25.94■■□□□ 1.74
PLD3-211ENST00000485448 NPHP4O75161 1426 aaPredicted RBP25.91■■□□□ 1.74
PLD3-211ENST00000485448 IQGAP3Q86VI3 1631 aa25.9■■□□□ 1.74
PLD3-211ENST00000485448 TMEM2Q9UHN6 1383 aa25.89■■□□□ 1.74
PLD3-211ENST00000485448 GCC2Q8IWJ2 1684 aa25.88■■□□□ 1.73
PLD3-211ENST00000485448 TRIM52Q96A61 297 aa25.88■■□□□ 1.73
PLD3-211ENST00000485448 SLIT1O75093 1534 aa25.87■■□□□ 1.73
PLD3-211ENST00000485448 ZNF335Q9H4Z2 1342 aaPredicted RBP25.87■■□□□ 1.73
PLD3-211ENST00000485448 KDM5AP29375 1690 aaKnown RBP25.87■■□□□ 1.73
PLD3-211ENST00000485448 ARHGAP23Q9P227 1491 aa25.87■■□□□ 1.73
PLD3-211ENST00000485448 UBR1Q8IWV7 1749 aa25.87■■□□□ 1.73
PLD3-211ENST00000485448 SCAF11Q99590 1463 aaKnown RBP25.86■■□□□ 1.73
PLD3-211ENST00000485448 POLR1AO95602 1720 aaPredicted RBP25.85■■□□□ 1.73
PLD3-211ENST00000485448 LTKP29376 864 aa25.85■■□□□ 1.73
PLD3-211ENST00000485448 IQSEC2Q5JU85 1478 aa25.84■■□□□ 1.73
PLD3-211ENST00000485448 SYNMO15061 1565 aa25.84■■□□□ 1.73
PLD3-211ENST00000485448 PIK3C2BO00750 1634 aa25.83■■□□□ 1.73
PLD3-211ENST00000485448 LTBP4Q8N2S1 1624 aa25.83■■□□□ 1.73
PLD3-211ENST00000485448 NEURL4Q96JN8 1562 aa25.82■■□□□ 1.72
PLD3-211ENST00000485448 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.82■■□□□ 1.72
PLD3-211ENST00000485448 CHGAP10645 457 aaKnown RBP25.8■■□□□ 1.72
PLD3-211ENST00000485448 SLC4A1APQ9BWU0 796 aaKnown RBP25.79■■□□□ 1.72
PLD3-211ENST00000485448 ADGRB3O60242 1522 aa25.78■■□□□ 1.72
PLD3-211ENST00000485448 E9PCH4 1651 aa25.78■■□□□ 1.72
PLD3-211ENST00000485448 CPS1P31327 1500 aa25.76■■□□□ 1.71
PLD3-211ENST00000485448 IQGAP1P46940 1657 aa25.75■■□□□ 1.71
PLD3-211ENST00000485448 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms