RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 NISCHQ9Y2I1 1504 aa41.93■■■■■ 4.3
PLD3-211ENST00000485448 CCDC180Q9P1Z9 1646 aa37.3■■■■□ 3.56
PLD3-211ENST00000485448 ABCC9O60706 1549 aa36.68■■■■□ 3.46
PLD3-211ENST00000485448 RB1CC1Q8TDY2 1594 aa35.29■■■■□ 3.24
PLD3-211ENST00000485448 DCAF8L2P0C7V8 631 aa35.26■■■■□ 3.23
PLD3-211ENST00000485448 NACADO15069 1562 aa35.23■■■■□ 3.23
PLD3-211ENST00000485448 MYO15BQ96JP2 1530 aa35.01■■■■□ 3.2
PLD3-211ENST00000485448 ZCCHC6Q5VYS8 1495 aaKnown RBP34.84■■■■□ 3.17
PLD3-211ENST00000485448 DCAF1Q9Y4B6 1507 aa34.76■■■■□ 3.15
PLD3-211ENST00000485448 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
PLD3-211ENST00000485448 UNC13AQ9UPW8 1703 aa34.2■■■■□ 3.07
PLD3-211ENST00000485448 BICRAQ9NZM4 1560 aa34.07■■■■□ 3.04
PLD3-211ENST00000485448 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
PLD3-211ENST00000485448 SHROOM4Q9ULL8 1493 aa33.94■■■■□ 3.02
PLD3-211ENST00000485448 DNAJC5BQ9UF47 199 aa33.84■■■■□ 3.01
PLD3-211ENST00000485448 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.92
PLD3-211ENST00000485448 CC2D2AQ9P2K1 1620 aa33.14■■■□□ 2.9
PLD3-211ENST00000485448 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
PLD3-211ENST00000485448 BAZ1AQ9NRL2 1556 aaPredicted RBP32.55■■■□□ 2.8
PLD3-211ENST00000485448 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
PLD3-211ENST00000485448 SMARCA4P51532 1647 aa32.5■■■□□ 2.79
PLD3-211ENST00000485448 ATAD2BQ9ULI0 1458 aa32.46■■■□□ 2.79
PLD3-211ENST00000485448 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
PLD3-211ENST00000485448 AEBP2Q6ZN18 517 aaPredicted RBP32.33■■■□□ 2.77
PLD3-211ENST00000485448 HMGXB3Q12766 1538 aa32.28■■■□□ 2.76
PLD3-211ENST00000485448 PEG3Q9GZU2 1588 aa32.25■■■□□ 2.75
PLD3-211ENST00000485448 MROH2BQ7Z745 1585 aa32.23■■■□□ 2.75
PLD3-211ENST00000485448 BAZ1BQ9UIG0 1483 aaKnown RBP32.19■■■□□ 2.74
PLD3-211ENST00000485448 RSF1Q96T23 1441 aaPredicted RBP31.89■■■□□ 2.7
PLD3-211ENST00000485448 WIZO95785 1651 aa31.82■■■□□ 2.68
PLD3-211ENST00000485448 ERCC6Q03468 1493 aa31.73■■■□□ 2.67
PLD3-211ENST00000485448 LAMC3Q9Y6N6 1575 aa31.66■■■□□ 2.66
PLD3-211ENST00000485448 NESP48681 1621 aa31.63■■■□□ 2.65
PLD3-211ENST00000485448 CADPSQ9ULU8 1353 aa31.6■■■□□ 2.65
PLD3-211ENST00000485448 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.64
PLD3-211ENST00000485448 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
PLD3-211ENST00000485448 CUX2O14529 1486 aa31.48■■■□□ 2.63
PLD3-211ENST00000485448 CFTRP13569 1480 aa31.32■■■□□ 2.6
PLD3-211ENST00000485448 CCDC88BA6NC98 1476 aa31.23■■■□□ 2.59
PLD3-211ENST00000485448 KIF21AQ7Z4S6 1674 aa31.17■■■□□ 2.58
PLD3-211ENST00000485448 FANCD2Q9BXW9 1451 aa31.16■■■□□ 2.58
PLD3-211ENST00000485448 THOC2Q8NI27 1593 aaKnown RBP31.15■■■□□ 2.58
PLD3-211ENST00000485448 CEP164Q9UPV0 1460 aa31.14■■■□□ 2.58
PLD3-211ENST00000485448 MRC2Q9UBG0 1479 aa31.13■■■□□ 2.57
PLD3-211ENST00000485448 SUPT5HO00267 1087 aaKnown RBP30.99■■■□□ 2.55
PLD3-211ENST00000485448 WDR62O43379 1518 aa30.98■■■□□ 2.55
PLD3-211ENST00000485448 PRDM2Q13029 1718 aa30.86■■■□□ 2.53
PLD3-211ENST00000485448 DNAJC5Q9H3Z4 198 aa30.81■■■□□ 2.52
PLD3-211ENST00000485448 ABCC8Q09428 1581 aa30.78■■■□□ 2.52
PLD3-211ENST00000485448 URB2Q14146 1524 aaKnown RBP30.77■■■□□ 2.52
PLD3-211ENST00000485448 TOPBP1Q92547 1522 aa30.6■■■□□ 2.49
PLD3-211ENST00000485448 DNMBPQ6XZF7 1577 aa30.54■■■□□ 2.48
PLD3-211ENST00000485448 IFT140Q96RY7 1462 aa30.54■■■□□ 2.48
PLD3-211ENST00000485448 POLA1P09884 1462 aaPredicted RBP30.33■■■□□ 2.45
PLD3-211ENST00000485448 SOGA1O94964 1423 aa30.31■■■□□ 2.44
PLD3-211ENST00000485448 OSCARQ8IYS5 282 aa30.28■■■□□ 2.44
PLD3-211ENST00000485448 ZNF608Q9ULD9 1512 aaPredicted RBP30.28■■■□□ 2.44
PLD3-211ENST00000485448 CUX1P39880 1505 aa30.25■■■□□ 2.43
PLD3-211ENST00000485448 TARBP1Q13395 1621 aaKnown RBP30.22■■■□□ 2.43
PLD3-211ENST00000485448 FGD5Q6ZNL6 1462 aa30.22■■■□□ 2.43
PLD3-211ENST00000485448 CHIC1Q5VXU3 224 aa30.19■■■□□ 2.42
PLD3-211ENST00000485448 RAD54L2Q9Y4B4 1467 aa30.17■■■□□ 2.42
PLD3-211ENST00000485448 AQRO60306 1485 aaKnown RBP eCLIP30.16■■■□□ 2.42
PLD3-211ENST00000485448 EIF4G3O43432 1585 aaKnown RBP30.12■■■□□ 2.41
PLD3-211ENST00000485448 WDR97A6NE52 1622 aa30.11■■■□□ 2.41
PLD3-211ENST00000485448 WRNQ14191 1432 aaPredicted RBP eCLIP30.11■■■□□ 2.41
PLD3-211ENST00000485448 TDRD9Q8NDG6 1382 aaKnown RBP30.11■■■□□ 2.41
PLD3-211ENST00000485448 TOP2BQ02880 1626 aa29.98■■■□□ 2.39
PLD3-211ENST00000485448 ABCA10Q8WWZ4 1543 aa29.97■■■□□ 2.39
PLD3-211ENST00000485448 FBLN2P98095 1184 aa29.96■■■□□ 2.39
PLD3-211ENST00000485448 GRIN2BQ13224 1484 aa29.95■■■□□ 2.39
PLD3-211ENST00000485448 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
PLD3-211ENST00000485448 GAPVD1Q14C86 1478 aa29.91■■■□□ 2.38
PLD3-211ENST00000485448 CHMP7Q8WUX9 453 aaPredicted RBP29.9■■■□□ 2.38
PLD3-211ENST00000485448 MAGI1Q96QZ7 1491 aaPredicted RBP29.89■■■□□ 2.37
PLD3-211ENST00000485448 SYNJ1O43426 1573 aa29.87■■■□□ 2.37
PLD3-211ENST00000485448 SNAPC4Q5SXM2 1469 aa29.84■■■□□ 2.37
PLD3-211ENST00000485448 SYNJ2O15056 1496 aa29.77■■■□□ 2.36
PLD3-211ENST00000485448 ABCA5Q8WWZ7 1642 aa29.75■■■□□ 2.35
PLD3-211ENST00000485448 CHD1O14646 1710 aa29.72■■■□□ 2.35
PLD3-211ENST00000485448 PBRM1Q86U86 1689 aa29.67■■■□□ 2.34
PLD3-211ENST00000485448 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
PLD3-211ENST00000485448 ERICH3Q5RHP9 1530 aa29.62■■■□□ 2.33
PLD3-211ENST00000485448 FHAD1B1AJZ9 1412 aa29.6■■■□□ 2.33
PLD3-211ENST00000485448 ARHGEF11O15085 1522 aa29.56■■■□□ 2.32
PLD3-211ENST00000485448 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
PLD3-211ENST00000485448 RIMBP3CA6NJZ7 1639 aa29.51■■■□□ 2.32
PLD3-211ENST00000485448 RIMBP3BA6NNM3 1639 aa29.51■■■□□ 2.32
PLD3-211ENST00000485448 RIMBP3Q9UFD9 1639 aa29.51■■■□□ 2.32
PLD3-211ENST00000485448 GRIN2AQ12879 1464 aa29.51■■■□□ 2.31
PLD3-211ENST00000485448 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
PLD3-211ENST00000485448 ADAMTS12P58397 1594 aa29.48■■■□□ 2.31
PLD3-211ENST00000485448 CYB5RLQ6IPT4 315 aa29.45■■■□□ 2.3
PLD3-211ENST00000485448 IGF1RP08069 1367 aa29.44■■■□□ 2.3
PLD3-211ENST00000485448 NUP160Q12769 1436 aa29.4■■■□□ 2.3
PLD3-211ENST00000485448 CEP170Q5SW79 1584 aa29.27■■■□□ 2.28
PLD3-211ENST00000485448 ARAP1Q96P48 1450 aa29.27■■■□□ 2.28
PLD3-211ENST00000485448 CARMIL1Q5VZK9 1371 aa29.27■■■□□ 2.28
PLD3-211ENST00000485448 CUL7Q14999 1698 aa29.26■■■□□ 2.27
PLD3-211ENST00000485448 JPH4Q96JJ6 628 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms