RNA–Protein interactions for RNA: ENST00000483891.1

COPS6-209, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-209ENST00000483891 DEPDC5O75140 1603 aa9.42□□□□□ -0.9
COPS6-209ENST00000483891 MYT1LQ9UL68 1186 aa9.42□□□□□ -0.9
COPS6-209ENST00000483891 PREX2Q70Z35 1606 aa9.42□□□□□ -0.9
COPS6-209ENST00000483891 SYNMO15061 1565 aa9.41□□□□□ -0.9
COPS6-209ENST00000483891 PLXNC1O60486 1568 aa9.41□□□□□ -0.9
COPS6-209ENST00000483891 TROQ12816 1431 aaPredicted RBP9.41□□□□□ -0.9
COPS6-209ENST00000483891 MTUS2Q5JR59 1369 aa9.41□□□□□ -0.9
COPS6-209ENST00000483891 POTEAQ6S8J7 498 aa9.41□□□□□ -0.9
COPS6-209ENST00000483891 CDK11AQ9UQ88 783 aaPredicted RBP9.41□□□□□ -0.9
COPS6-209ENST00000483891 STRCP1A6NGW2 1772 aa9.41□□□□□ -0.9
COPS6-209ENST00000483891 EHBP1L1Q8N3D4 1523 aa9.4□□□□□ -0.91
COPS6-209ENST00000483891 LRRC7Q96NW7 1537 aa9.4□□□□□ -0.91
COPS6-209ENST00000483891 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
COPS6-209ENST00000483891 MAPK8IP2Q13387 824 aaPredicted RBP9.39□□□□□ -0.91
COPS6-209ENST00000483891 KANK4Q5T7N3 995 aaPredicted RBP9.39□□□□□ -0.91
COPS6-209ENST00000483891 SETD1AO15047 1707 aaKnown RBP9.38□□□□□ -0.91
COPS6-209ENST00000483891 LRRC9Q6ZRR7 1453 aa9.38□□□□□ -0.91
COPS6-209ENST00000483891 IQGAP1P46940 1657 aa9.37□□□□□ -0.91
COPS6-209ENST00000483891 ANKLE2Q86XL3 938 aa9.36□□□□□ -0.91
COPS6-209ENST00000483891 NPHP4O75161 1426 aaPredicted RBP9.36□□□□□ -0.91
COPS6-209ENST00000483891 FAM135BQ49AJ0 1406 aa9.36□□□□□ -0.91
COPS6-209ENST00000483891 CDC42BPAQ5VT25 1732 aa9.36□□□□□ -0.91
COPS6-209ENST00000483891 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
COPS6-209ENST00000483891 XIRP1Q702N8 1843 aaKnown RBP9.35□□□□□ -0.91
COPS6-209ENST00000483891 UPF1Q92900 1129 aaKnown RBP eCLIP9.35□□□□□ -0.91
COPS6-209ENST00000483891 FAM135AQ9P2D6 1515 aa9.35□□□□□ -0.91
COPS6-209ENST00000483891 A2MP01023 1474 aa9.34□□□□□ -0.91
COPS6-209ENST00000483891 INO80Q9ULG1 1556 aaPredicted RBP9.34□□□□□ -0.91
COPS6-209ENST00000483891 CNKSR2Q8WXI2 1034 aa9.34□□□□□ -0.91
COPS6-209ENST00000483891 ADGBQ8N7X0 1667 aa9.34□□□□□ -0.91
COPS6-209ENST00000483891 ATP7AQ04656 1500 aa9.34□□□□□ -0.91
COPS6-209ENST00000483891 NCOA2Q15596 1464 aa9.34□□□□□ -0.91
COPS6-209ENST00000483891 THEMISQ8N1K5 641 aaPredicted RBP9.33□□□□□ -0.92
COPS6-209ENST00000483891 PZPP20742 1482 aa9.33□□□□□ -0.92
COPS6-209ENST00000483891 NLRP1Q9C000 1473 aa9.33□□□□□ -0.92
COPS6-209ENST00000483891 ZC3H13Q5T200 1668 aaKnown RBP9.32□□□□□ -0.92
COPS6-209ENST00000483891 CCNB3Q8WWL7 1395 aa9.32□□□□□ -0.92
COPS6-209ENST00000483891 TNRQ92752 1358 aa9.32□□□□□ -0.92
COPS6-209ENST00000483891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.32□□□□□ -0.929e-7■■□□□ 13.7
COPS6-209ENST00000483891 SPAG9O60271 1321 aaKnown RBP9.31□□□□□ -0.92
COPS6-209ENST00000483891 KIAA1107Q9UPP5 1409 aa9.31□□□□□ -0.92
COPS6-209ENST00000483891 UGGT1Q9NYU2 1555 aa9.31□□□□□ -0.92
COPS6-209ENST00000483891 GGT6Q6P531 493 aa9.3□□□□□ -0.92
COPS6-209ENST00000483891 ZNF777Q9ULD5 760 aaPredicted RBP9.29□□□□□ -0.92
COPS6-209ENST00000483891 SYCP2Q9BX26 1530 aa9.29□□□□□ -0.92
COPS6-209ENST00000483891 KDM5DQ9BY66 1539 aa9.29□□□□□ -0.92
COPS6-209ENST00000483891 MIA2Q96PC5 1412 aa9.29□□□□□ -0.92
COPS6-209ENST00000483891 NPM3O75607 178 aaKnown RBP9.28□□□□□ -0.92
COPS6-209ENST00000483891 PLEKHH2Q8IVE3 1493 aa9.28□□□□□ -0.92
COPS6-209ENST00000483891 GPATCH8Q9UKJ3 1502 aaKnown RBP9.27□□□□□ -0.93
COPS6-209ENST00000483891 ROBO1Q9Y6N7 1651 aa9.27□□□□□ -0.93
COPS6-209ENST00000483891 MYOM3Q5VTT5 1437 aa9.27□□□□□ -0.93
COPS6-209ENST00000483891 FBXO31Q5XUX0 539 aaPredicted RBP9.26□□□□□ -0.93
COPS6-209ENST00000483891 CFDP1Q9UEE9 299 aaPredicted RBP9.26□□□□□ -0.93
COPS6-209ENST00000483891 CDK12Q9NYV4 1490 aaPredicted RBP9.26□□□□□ -0.93
COPS6-209ENST00000483891 FAM50AQ14320 339 aaKnown RBP9.25□□□□□ -0.93
COPS6-209ENST00000483891 DHX29Q7Z478 1369 aaKnown RBP9.24□□□□□ -0.93
COPS6-209ENST00000483891 RTEL1-TNFRSF6BF6WH68 1400 aa9.24□□□□□ -0.93
COPS6-209ENST00000483891 FGD6Q6ZV73 1430 aa9.24□□□□□ -0.93
COPS6-209ENST00000483891 CAMSAP2Q08AD1 1489 aa9.24□□□□□ -0.93
COPS6-209ENST00000483891 ZNF644Q9H582 1327 aaPredicted RBP9.24□□□□□ -0.93
COPS6-209ENST00000483891 JCADQ9P266 1359 aa9.24□□□□□ -0.93
COPS6-209ENST00000483891 HNRNPMP52272 730 aaKnown RBP eCLIP9.23□□□□□ -0.93
COPS6-209ENST00000483891 ZNF772Q68DY9 489 aaPredicted RBP9.23□□□□□ -0.93
COPS6-209ENST00000483891 PHLPP1O60346 1717 aa9.22□□□□□ -0.93
COPS6-209ENST00000483891 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
COPS6-209ENST00000483891 PTPN23Q9H3S7 1636 aa9.22□□□□□ -0.93
COPS6-209ENST00000483891 SCAF11Q99590 1463 aaKnown RBP9.21□□□□□ -0.93
COPS6-209ENST00000483891 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.93
COPS6-209ENST00000483891 SLIT1O75093 1534 aa9.21□□□□□ -0.93
COPS6-209ENST00000483891 ITGAEP38570 1179 aa9.21□□□□□ -0.94
COPS6-209ENST00000483891 SPATA31A6Q5VVP1 1343 aa9.2□□□□□ -0.94
COPS6-209ENST00000483891 MBD5Q9P267 1494 aa9.2□□□□□ -0.94
COPS6-209ENST00000483891 COL16A1Q07092 1604 aaPredicted RBP9.2□□□□□ -0.94
COPS6-209ENST00000483891 WASHC2CQ9Y4E1 1318 aa9.19□□□□□ -0.94
COPS6-209ENST00000483891 LRP6O75581 1613 aa9.18□□□□□ -0.94
COPS6-209ENST00000483891 SHPRHQ149N8 1683 aa9.18□□□□□ -0.94
COPS6-209ENST00000483891 RRBP1Q9P2E9 1410 aaKnown RBP9.18□□□□□ -0.94
COPS6-209ENST00000483891 ABCC3O15438 1527 aa9.17□□□□□ -0.94
COPS6-209ENST00000483891 TMEM94Q12767 1356 aa9.17□□□□□ -0.94
COPS6-209ENST00000483891 RXRBP28702 533 aa9.17□□□□□ -0.94
COPS6-209ENST00000483891 PRDM15P57071 1507 aaPredicted RBP9.16□□□□□ -0.94
COPS6-209ENST00000483891 CCDC141Q6ZP82 1450 aa9.16□□□□□ -0.94
COPS6-209ENST00000483891 KIF3BO15066 747 aa9.16□□□□□ -0.94
COPS6-209ENST00000483891 LTKP29376 864 aa9.16□□□□□ -0.94
COPS6-209ENST00000483891 TRIM52Q96A61 297 aa9.16□□□□□ -0.94
COPS6-209ENST00000483891 ERVK-7P63135 1459 aa9.15□□□□□ -0.94
COPS6-209ENST00000483891 DAPK1P53355 1430 aa9.15□□□□□ -0.94
COPS6-209ENST00000483891 KCNA6P17658 529 aa9.15□□□□□ -0.94
COPS6-209ENST00000483891 KDM5AP29375 1690 aaKnown RBP9.15□□□□□ -0.94
COPS6-209ENST00000483891 NWD1Q149M9 1564 aa9.15□□□□□ -0.95
COPS6-209ENST00000483891 CFAP65Q6ZU64 1925 aaKnown RBP9.15□□□□□ -0.95
COPS6-209ENST00000483891 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.95
COPS6-209ENST00000483891 TET3O43151 1660 aa9.14□□□□□ -0.95
COPS6-209ENST00000483891 SLAIN2Q9P270 581 aa9.14□□□□□ -0.95
COPS6-209ENST00000483891 CHIC2Q9UKJ5 165 aa9.14□□□□□ -0.95
COPS6-209ENST00000483891 ABCC5O15440 1437 aa9.14□□□□□ -0.95
COPS6-209ENST00000483891 CROCC2H7BZ55 1655 aa9.13□□□□□ -0.95
COPS6-209ENST00000483891 AHDC1Q5TGY3 1603 aaPredicted RBP9.13□□□□□ -0.95
COPS6-209ENST00000483891 ARHGEF5Q12774 1597 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms