RNA–Protein interactions for RNA: ENST00000483558.5

PKD1-215, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 577 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-215ENST00000483558 NPHP4O75161 1426 aaPredicted RBP27.88■■■□□ 2.05
PKD1-215ENST00000483558 LRRC7Q96NW7 1537 aa27.87■■■□□ 2.05
PKD1-215ENST00000483558 INO80Q9ULG1 1556 aaPredicted RBP27.86■■■□□ 2.05
PKD1-215ENST00000483558 THEMISQ8N1K5 641 aaPredicted RBP27.86■■■□□ 2.05
PKD1-215ENST00000483558 GPATCH8Q9UKJ3 1502 aaKnown RBP27.83■■■□□ 2.05
PKD1-215ENST00000483558 CFDP1Q9UEE9 299 aaPredicted RBP27.8■■■□□ 2.04
PKD1-215ENST00000483558 ADGBQ8N7X0 1667 aa27.8■■■□□ 2.04
PKD1-215ENST00000483558 SETD1AO15047 1707 aaKnown RBP27.78■■■□□ 2.04
PKD1-215ENST00000483558 IQGAP1P46940 1657 aa27.78■■■□□ 2.04
PKD1-215ENST00000483558 RNF17Q9BXT8 1623 aaKnown RBP27.78■■■□□ 2.04
PKD1-215ENST00000483558 MED14O60244 1454 aa27.78■■■□□ 2.04
PKD1-215ENST00000483558 CCDC18Q5T9S5 1454 aa27.77■■■□□ 2.04
PKD1-215ENST00000483558 KIAA1107Q9UPP5 1409 aa27.76■■■□□ 2.04
PKD1-215ENST00000483558 DEPDC5O75140 1603 aa27.75■■■□□ 2.03
PKD1-215ENST00000483558 UGGT1Q9NYU2 1555 aa27.75■■■□□ 2.03
PKD1-215ENST00000483558 KIF3BO15066 747 aa27.75■■■□□ 2.03
PKD1-215ENST00000483558 CASKIN1Q8WXD9 1431 aa27.75■■■□□ 2.03
PKD1-215ENST00000483558 PZPP20742 1482 aa27.73■■■□□ 2.03
PKD1-215ENST00000483558 MIA2Q96PC5 1412 aa27.73■■■□□ 2.03
PKD1-215ENST00000483558 FAM135AQ9P2D6 1515 aa27.72■■■□□ 2.03
PKD1-215ENST00000483558 ZNF644Q9H582 1327 aaPredicted RBP27.72■■■□□ 2.03
PKD1-215ENST00000483558 WASHC2CQ9Y4E1 1318 aa27.71■■■□□ 2.03
PKD1-215ENST00000483558 PLEKHH2Q8IVE3 1493 aa27.7■■■□□ 2.03
PKD1-215ENST00000483558 DHX29Q7Z478 1369 aaKnown RBP27.68■■■□□ 2.02
PKD1-215ENST00000483558 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
PKD1-215ENST00000483558 SYNMO15061 1565 aa27.67■■■□□ 2.02
PKD1-215ENST00000483558 NLRP1Q9C000 1473 aa27.66■■■□□ 2.02
PKD1-215ENST00000483558 CCNB3Q8WWL7 1395 aa27.66■■■□□ 2.02
PKD1-215ENST00000483558 XIRP1Q702N8 1843 aaKnown RBP27.65■■■□□ 2.02
PKD1-215ENST00000483558 KDM5DQ9BY66 1539 aa27.63■■■□□ 2.01
PKD1-215ENST00000483558 ZC3H13Q5T200 1668 aaKnown RBP27.59■■■□□ 2.01
PKD1-215ENST00000483558 CFAP65Q6ZU64 1925 aaKnown RBP27.58■■■□□ 2.01
PKD1-215ENST00000483558 UPF1Q92900 1129 aaKnown RBP eCLIP27.57■■■□□ 2
PKD1-215ENST00000483558 FAM135BQ49AJ0 1406 aa27.57■■■□□ 2
PKD1-215ENST00000483558 MBD5Q9P267 1494 aa27.57■■■□□ 2
PKD1-215ENST00000483558 RTEL1-TNFRSF6BF6WH68 1400 aa27.54■■■□□ 2
PKD1-215ENST00000483558 LTKP29376 864 aa27.53■■■□□ 2
PKD1-215ENST00000483558 FYCO1Q9BQS8 1478 aa27.51■■■□□ 2
PKD1-215ENST00000483558 RBM33Q96EV2 1170 aaKnown RBP27.51■■□□□ 1.99
PKD1-215ENST00000483558 TXNDC2Q86VQ3 553 aa27.5■■□□□ 1.99
PKD1-215ENST00000483558 ROBO1Q9Y6N7 1651 aa27.49■■□□□ 1.99
PKD1-215ENST00000483558 TRIM52Q96A61 297 aa27.49■■□□□ 1.99
PKD1-215ENST00000483558 SCAF11Q99590 1463 aaKnown RBP27.46■■□□□ 1.99
PKD1-215ENST00000483558 UBR1Q8IWV7 1749 aa27.44■■□□□ 1.98
PKD1-215ENST00000483558 TMEM94Q12767 1356 aa27.44■■□□□ 1.98
PKD1-215ENST00000483558 MTUS2Q5JR59 1369 aa27.44■■□□□ 1.98
PKD1-215ENST00000483558 TIAM1Q13009 1591 aa27.43■■□□□ 1.98
PKD1-215ENST00000483558 ERVK-7P63135 1459 aa27.39■■□□□ 1.98
PKD1-215ENST00000483558 NCOA2Q15596 1464 aa27.39■■□□□ 1.98
PKD1-215ENST00000483558 PROSER2Q86WR7 435 aaPredicted RBP27.39■■□□□ 1.98
PKD1-215ENST00000483558 PHLPP1O60346 1717 aa27.37■■□□□ 1.97
PKD1-215ENST00000483558 ABCC3O15438 1527 aa27.36■■□□□ 1.97
PKD1-215ENST00000483558 EID1Q9Y6B2 187 aa27.35■■□□□ 1.97
PKD1-215ENST00000483558 CCDC141Q6ZP82 1450 aa27.35■■□□□ 1.97
PKD1-215ENST00000483558 JCADQ9P266 1359 aa27.34■■□□□ 1.97
PKD1-215ENST00000483558 MEX3CQ5U5Q3 659 aaKnown RBP27.33■■□□□ 1.97
PKD1-215ENST00000483558 ARHGAP23Q9P227 1491 aa27.32■■□□□ 1.96
PKD1-215ENST00000483558 KCNA6P17658 529 aa27.31■■□□□ 1.96
PKD1-215ENST00000483558 SLC26A8Q96RN1 970 aa27.3■■□□□ 1.96
PKD1-215ENST00000483558 SLIT1O75093 1534 aa27.3■■□□□ 1.96
PKD1-215ENST00000483558 SLAIN2Q9P270 581 aa27.29■■□□□ 1.96
PKD1-215ENST00000483558 MAP3K1Q13233 1512 aa27.29■■□□□ 1.96
PKD1-215ENST00000483558 CEP152O94986 1710 aa27.29■■□□□ 1.96
PKD1-215ENST00000483558 ZNF772Q68DY9 489 aaPredicted RBP27.28■■□□□ 1.96
PKD1-215ENST00000483558 LRP6O75581 1613 aa27.27■■□□□ 1.96
PKD1-215ENST00000483558 TSPY4P0CV99 314 aa27.27■■□□□ 1.96
PKD1-215ENST00000483558 TSPY10P0CW01 314 aa27.27■■□□□ 1.96
PKD1-215ENST00000483558 CAMSAP2Q08AD1 1489 aa27.26■■□□□ 1.95
PKD1-215ENST00000483558 SRCAPQ6ZRS2 3230 aa27.26■■□□□ 1.95
PKD1-215ENST00000483558 RSPH4AQ5TD94 716 aa27.26■■□□□ 1.95
PKD1-215ENST00000483558 RXRBP28702 533 aa27.25■■□□□ 1.95
PKD1-215ENST00000483558 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
PKD1-215ENST00000483558 STAG3Q9UJ98 1225 aa27.22■■□□□ 1.95
PKD1-215ENST00000483558 MSH6P52701 1360 aa27.2■■□□□ 1.94
PKD1-215ENST00000483558 TMEM2Q9UHN6 1383 aa27.2■■□□□ 1.94
PKD1-215ENST00000483558 PIK3C2BO00750 1634 aa27.19■■□□□ 1.94
PKD1-215ENST00000483558 EHBP1L1Q8N3D4 1523 aa27.18■■□□□ 1.94
PKD1-215ENST00000483558 COL16A1Q07092 1604 aaPredicted RBP27.18■■□□□ 1.94
PKD1-215ENST00000483558 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
PKD1-215ENST00000483558 CEP162Q5TB80 1403 aa27.17■■□□□ 1.94
PKD1-215ENST00000483558 PRDM15P57071 1507 aaPredicted RBP27.17■■□□□ 1.94
PKD1-215ENST00000483558 SPATA31A6Q5VVP1 1343 aa27.16■■□□□ 1.94
PKD1-215ENST00000483558 BCANQ96GW7 911 aa27.15■■□□□ 1.94
PKD1-215ENST00000483558 NUTM2BA6NNL0 878 aaPredicted RBP27.14■■□□□ 1.94
PKD1-215ENST00000483558 NUTM2EB1AL46 878 aaPredicted RBP27.14■■□□□ 1.94
PKD1-215ENST00000483558 NUTM2AQ8IVF1 878 aaPredicted RBP27.14■■□□□ 1.94
PKD1-215ENST00000483558 TET3O43151 1660 aa27.12■■□□□ 1.93
PKD1-215ENST00000483558 ARHGEF5Q12774 1597 aa27.12■■□□□ 1.93
PKD1-215ENST00000483558 IDI1Q13907 227 aa27.08■■□□□ 1.93
PKD1-215ENST00000483558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.08■■□□□ 1.93
PKD1-215ENST00000483558 EIF2AK4Q9P2K8 1649 aaKnown RBP27.08■■□□□ 1.93
PKD1-215ENST00000483558 FGD6Q6ZV73 1430 aa27.06■■□□□ 1.92
PKD1-215ENST00000483558 NKTRP30414 1462 aaKnown RBP27.06■■□□□ 1.92
PKD1-215ENST00000483558 AFF2P51816 1311 aa27.05■■□□□ 1.92
PKD1-215ENST00000483558 EFCAB6Q5THR3 1501 aa27.05■■□□□ 1.92
PKD1-215ENST00000483558 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
PKD1-215ENST00000483558 NUTM2DQ5VT03 806 aaPredicted RBP27.04■■□□□ 1.92
PKD1-215ENST00000483558 C14orf37Q86TY3 774 aa27.03■■□□□ 1.92
PKD1-215ENST00000483558 CDK12Q9NYV4 1490 aaPredicted RBP27.03■■□□□ 1.92
PKD1-215ENST00000483558 SHPRHQ149N8 1683 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms