RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 PTPRKQ15262 1439 aa20.53■□□□□ 0.88
SSR1-208ENST00000483409 NCOA1Q15788 1441 aa20.52■□□□□ 0.87
SSR1-208ENST00000483409 ERBINQ96RT1 1412 aa20.51■□□□□ 0.87
SSR1-208ENST00000483409 RRBP1Q9P2E9 1410 aaKnown RBP20.51■□□□□ 0.87
SSR1-208ENST00000483409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.5■□□□□ 0.87
SSR1-208ENST00000483409 KDM5DQ9BY66 1539 aa20.5■□□□□ 0.87
SSR1-208ENST00000483409 ITGAEP38570 1179 aa20.5■□□□□ 0.87
SSR1-208ENST00000483409 PREX1Q8TCU6 1659 aa20.5■□□□□ 0.87
SSR1-208ENST00000483409 SETD1BQ9UPS6 1966 aaKnown RBP20.5■□□□□ 0.87
SSR1-208ENST00000483409 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
SSR1-208ENST00000483409 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
SSR1-208ENST00000483409 ZMYM3Q14202 1370 aa20.48■□□□□ 0.87
SSR1-208ENST00000483409 FAM135AQ9P2D6 1515 aa20.48■□□□□ 0.87
SSR1-208ENST00000483409 CEP152O94986 1710 aa20.47■□□□□ 0.87
SSR1-208ENST00000483409 LMTK3Q96Q04 1460 aa20.47■□□□□ 0.87
SSR1-208ENST00000483409 ZC3H13Q5T200 1668 aaKnown RBP20.46■□□□□ 0.87
SSR1-208ENST00000483409 DEPDC5O75140 1603 aa20.45■□□□□ 0.87
SSR1-208ENST00000483409 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
SSR1-208ENST00000483409 ABCC3O15438 1527 aa20.44■□□□□ 0.86
SSR1-208ENST00000483409 PRDM15P57071 1507 aaPredicted RBP20.43■□□□□ 0.86
SSR1-208ENST00000483409 ROCK1Q13464 1354 aa20.42■□□□□ 0.86
SSR1-208ENST00000483409 ANKRD50Q9ULJ7 1429 aa20.41■□□□□ 0.86
SSR1-208ENST00000483409 CAMSAP1Q5T5Y3 1602 aa20.41■□□□□ 0.86
SSR1-208ENST00000483409 CFAP65Q6ZU64 1925 aaKnown RBP20.41■□□□□ 0.86
SSR1-208ENST00000483409 NPATQ14207 1427 aa20.4■□□□□ 0.86
SSR1-208ENST00000483409 UHRF1BP1Q6BDS2 1440 aa20.4■□□□□ 0.86
SSR1-208ENST00000483409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.851e-10■■■□□ 15.2
SSR1-208ENST00000483409 PZPP20742 1482 aa20.38■□□□□ 0.85
SSR1-208ENST00000483409 MYO3AQ8NEV4 1616 aa20.38■□□□□ 0.85
SSR1-208ENST00000483409 HSPA2P54652 639 aa20.37■□□□□ 0.85
SSR1-208ENST00000483409 KANK1Q14678 1352 aa20.34■□□□□ 0.85
SSR1-208ENST00000483409 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
SSR1-208ENST00000483409 FBXO31Q5XUX0 539 aaPredicted RBP20.34■□□□□ 0.85
SSR1-208ENST00000483409 UNC13BO14795 1591 aa20.34■□□□□ 0.85
SSR1-208ENST00000483409 ZNF142P52746 1687 aaPredicted RBP20.33■□□□□ 0.85
SSR1-208ENST00000483409 GCC2Q8IWJ2 1684 aa20.32■□□□□ 0.84
SSR1-208ENST00000483409 CEP170BQ9Y4F5 1589 aaPredicted RBP20.3■□□□□ 0.84
SSR1-208ENST00000483409 TNRQ92752 1358 aa20.3■□□□□ 0.84
SSR1-208ENST00000483409 LMTK2Q8IWU2 1503 aa20.29■□□□□ 0.84
SSR1-208ENST00000483409 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
SSR1-208ENST00000483409 SPATA31D1Q6ZQQ2 1576 aa20.29■□□□□ 0.84
SSR1-208ENST00000483409 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
SSR1-208ENST00000483409 STRCQ7RTU9 1775 aa20.26■□□□□ 0.83
SSR1-208ENST00000483409 TET3O43151 1660 aa20.26■□□□□ 0.83
SSR1-208ENST00000483409 NAIPQ13075 1403 aa20.26■□□□□ 0.83
SSR1-208ENST00000483409 ARHGAP31Q2M1Z3 1444 aa20.26■□□□□ 0.83
SSR1-208ENST00000483409 IQGAP3Q86VI3 1631 aa20.25■□□□□ 0.83
SSR1-208ENST00000483409 A2ML1A8K2U0 1454 aa20.24■□□□□ 0.83
SSR1-208ENST00000483409 HFM1A2PYH4 1435 aa20.22■□□□□ 0.83
SSR1-208ENST00000483409 NLRP1Q9C000 1473 aa20.21■□□□□ 0.83
SSR1-208ENST00000483409 NUP155O75694 1391 aa20.2■□□□□ 0.82
SSR1-208ENST00000483409 E9PCH4 1651 aa20.19■□□□□ 0.82
SSR1-208ENST00000483409 SYNMO15061 1565 aa20.17■□□□□ 0.82
SSR1-208ENST00000483409 UGGT1Q9NYU2 1555 aa20.17■□□□□ 0.82
SSR1-208ENST00000483409 UBR1Q8IWV7 1749 aa20.16■□□□□ 0.82
SSR1-208ENST00000483409 RPRD2Q5VT52 1461 aaKnown RBP20.16■□□□□ 0.82
SSR1-208ENST00000483409 PLA2R1Q13018 1463 aa20.15■□□□□ 0.82
SSR1-208ENST00000483409 PIK3C2BO00750 1634 aa20.15■□□□□ 0.82
SSR1-208ENST00000483409 POLR1AO95602 1720 aaPredicted RBP20.15■□□□□ 0.82
SSR1-208ENST00000483409 NOS1P29475 1434 aa20.14■□□□□ 0.81
SSR1-208ENST00000483409 NCKAP5LQ9HCH0 1330 aa20.11■□□□□ 0.81
SSR1-208ENST00000483409 TRIM52Q96A61 297 aa20.1■□□□□ 0.81
SSR1-208ENST00000483409 THEMISQ8N1K5 641 aaPredicted RBP20.09■□□□□ 0.81
SSR1-208ENST00000483409 SPHKAPQ2M3C7 1700 aa20.09■□□□□ 0.81
SSR1-208ENST00000483409 MYO5BQ9ULV0 1848 aa20.09■□□□□ 0.81
SSR1-208ENST00000483409 DMRT2Q9Y5R5 561 aa20.08■□□□□ 0.81
SSR1-208ENST00000483409 KDM5AP29375 1690 aaKnown RBP20.07■□□□□ 0.8
SSR1-208ENST00000483409 PKD2Q13563 968 aa20.07■□□□□ 0.8
SSR1-208ENST00000483409 IDI1Q13907 227 aa20.07■□□□□ 0.8
SSR1-208ENST00000483409 PTPRTO14522 1441 aa20.07■□□□□ 0.8
SSR1-208ENST00000483409 NEURL4Q96JN8 1562 aa20.07■□□□□ 0.8
SSR1-208ENST00000483409 ADGRB3O60242 1522 aa20.06■□□□□ 0.8
SSR1-208ENST00000483409 SETD5Q9C0A6 1442 aa20.04■□□□□ 0.8
SSR1-208ENST00000483409 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
SSR1-208ENST00000483409 SLC52A1Q9NWF4 448 aa20.03■□□□□ 0.8
SSR1-208ENST00000483409 ANKLE2Q86XL3 938 aa20.02■□□□□ 0.8
SSR1-208ENST00000483409 TMEM131LA2VDJ0 1609 aa20.01■□□□□ 0.79
SSR1-208ENST00000483409 SLIT1O75093 1534 aa20.01■□□□□ 0.79
SSR1-208ENST00000483409 IQGAP1P46940 1657 aa20■□□□□ 0.79
SSR1-208ENST00000483409 ARHGAP23Q9P227 1491 aa20■□□□□ 0.79
SSR1-208ENST00000483409 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
SSR1-208ENST00000483409 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
SSR1-208ENST00000483409 SCAF11Q99590 1463 aaKnown RBP19.98■□□□□ 0.79
SSR1-208ENST00000483409 TRPM2O94759 1503 aa19.97■□□□□ 0.79
SSR1-208ENST00000483409 TMEM2Q9UHN6 1383 aa19.97■□□□□ 0.79
SSR1-208ENST00000483409 NPHP4O75161 1426 aaPredicted RBP19.97■□□□□ 0.79
SSR1-208ENST00000483409 CLTCL1P53675 1640 aa19.97■□□□□ 0.79
SSR1-208ENST00000483409 MED14O60244 1454 aa19.97■□□□□ 0.79
SSR1-208ENST00000483409 CHGAP10645 457 aaKnown RBP19.96■□□□□ 0.79
SSR1-208ENST00000483409 LTKP29376 864 aa19.95■□□□□ 0.78
SSR1-208ENST00000483409 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.78
SSR1-208ENST00000483409 EID1Q9Y6B2 187 aa19.94■□□□□ 0.78
SSR1-208ENST00000483409 KIF1BO60333 1816 aa19.94■□□□□ 0.78
SSR1-208ENST00000483409 FOXD1Q16676 465 aa19.93■□□□□ 0.78
SSR1-208ENST00000483409 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
SSR1-208ENST00000483409 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
SSR1-208ENST00000483409 LTBP4Q8N2S1 1624 aa19.91■□□□□ 0.78
SSR1-208ENST00000483409 ACIN1Q9UKV3 1341 aaKnown RBP19.9■□□□□ 0.78
SSR1-208ENST00000483409 ZFYVE9O95405 1425 aa19.9■□□□□ 0.78
SSR1-208ENST00000483409 RIMS2Q9UQ26 1411 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms