RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
TRAPPC12-218ENST00000479897 KDM5DQ9BY66 1539 aa18.8■□□□□ 0.6
TRAPPC12-218ENST00000479897 FAM135AQ9P2D6 1515 aa18.8■□□□□ 0.6
TRAPPC12-218ENST00000479897 ACIN1Q9UKV3 1341 aaKnown RBP18.8■□□□□ 0.6
TRAPPC12-218ENST00000479897 HRCP23327 699 aa18.8■□□□□ 0.6
TRAPPC12-218ENST00000479897 VWDEQ8N2E2 1590 aa18.78■□□□□ 0.6
TRAPPC12-218ENST00000479897 IQGAP3Q86VI3 1631 aa18.77■□□□□ 0.6
TRAPPC12-218ENST00000479897 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
TRAPPC12-218ENST00000479897 LMTK2Q8IWU2 1503 aa18.72■□□□□ 0.59
TRAPPC12-218ENST00000479897 KIF3BO15066 747 aa18.7■□□□□ 0.58
TRAPPC12-218ENST00000479897 TET3O43151 1660 aa18.69■□□□□ 0.58
TRAPPC12-218ENST00000479897 CEP152O94986 1710 aa18.69■□□□□ 0.58
TRAPPC12-218ENST00000479897 PZPP20742 1482 aa18.68■□□□□ 0.58
TRAPPC12-218ENST00000479897 ABCC3O15438 1527 aa18.68■□□□□ 0.58
TRAPPC12-218ENST00000479897 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
TRAPPC12-218ENST00000479897 KANK1Q14678 1352 aa18.67■□□□□ 0.58
TRAPPC12-218ENST00000479897 MROH2AA6NES4 1674 aa18.66■□□□□ 0.58
TRAPPC12-218ENST00000479897 ADAMTSL3P82987 1691 aa18.66■□□□□ 0.58
TRAPPC12-218ENST00000479897 FER1L4A9Z1Z3 1794 aa18.66■□□□□ 0.58
TRAPPC12-218ENST00000479897 CAMSAP1Q5T5Y3 1602 aa18.66■□□□□ 0.58
TRAPPC12-218ENST00000479897 EFCAB6Q5THR3 1501 aa18.65■□□□□ 0.58
TRAPPC12-218ENST00000479897 NUP155O75694 1391 aa18.65■□□□□ 0.58
TRAPPC12-218ENST00000479897 CLTCQ00610 1675 aaKnown RBP18.63■□□□□ 0.57
TRAPPC12-218ENST00000479897 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC12-218ENST00000479897 CNTLNQ9NXG0 1405 aa18.62■□□□□ 0.57
TRAPPC12-218ENST00000479897 E9PCH4 1651 aa18.61■□□□□ 0.57
TRAPPC12-218ENST00000479897 MADDQ8WXG6 1647 aa18.61■□□□□ 0.57
TRAPPC12-218ENST00000479897 GGT6Q6P531 493 aa18.61■□□□□ 0.57
TRAPPC12-218ENST00000479897 ARHGAP31Q2M1Z3 1444 aa18.6■□□□□ 0.57
TRAPPC12-218ENST00000479897 RPRD2Q5VT52 1461 aaKnown RBP18.59■□□□□ 0.57
TRAPPC12-218ENST00000479897 DHX57Q6P158 1386 aaKnown RBP18.58■□□□□ 0.57
TRAPPC12-218ENST00000479897 TRIM52Q96A61 297 aa18.58■□□□□ 0.56
TRAPPC12-218ENST00000479897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.57■□□□□ 0.561e-7■□□□□ 8.3
TRAPPC12-218ENST00000479897 RIMS1Q86UR5 1692 aaKnown RBP18.56■□□□□ 0.56
TRAPPC12-218ENST00000479897 WASHC2CQ9Y4E1 1318 aa18.55■□□□□ 0.56
TRAPPC12-218ENST00000479897 SPHKAPQ2M3C7 1700 aa18.54■□□□□ 0.56
TRAPPC12-218ENST00000479897 C3P01024 1663 aa18.54■□□□□ 0.56
TRAPPC12-218ENST00000479897 MLECQ14165 292 aa18.54■□□□□ 0.56
TRAPPC12-218ENST00000479897 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
TRAPPC12-218ENST00000479897 NPATQ14207 1427 aa18.54■□□□□ 0.56
TRAPPC12-218ENST00000479897 PREX1Q8TCU6 1659 aa18.54■□□□□ 0.56
TRAPPC12-218ENST00000479897 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
TRAPPC12-218ENST00000479897 SPATA31D1Q6ZQQ2 1576 aa18.51■□□□□ 0.55
TRAPPC12-218ENST00000479897 TRPM2O94759 1503 aa18.5■□□□□ 0.55
TRAPPC12-218ENST00000479897 PTPRTO14522 1441 aa18.49■□□□□ 0.55
TRAPPC12-218ENST00000479897 PKD2Q13563 968 aa18.49■□□□□ 0.55
TRAPPC12-218ENST00000479897 ESF1Q9H501 851 aaKnown RBP18.49■□□□□ 0.55
TRAPPC12-218ENST00000479897 NOS1P29475 1434 aa18.49■□□□□ 0.55
TRAPPC12-218ENST00000479897 ERVK-7P63135 1459 aa18.48■□□□□ 0.55
TRAPPC12-218ENST00000479897 ZMYM3Q14202 1370 aa18.48■□□□□ 0.55
TRAPPC12-218ENST00000479897 CLSPNQ9HAW4 1339 aa18.47■□□□□ 0.55
TRAPPC12-218ENST00000479897 SYNMO15061 1565 aa18.47■□□□□ 0.55
TRAPPC12-218ENST00000479897 PIK3C2BO00750 1634 aa18.46■□□□□ 0.55
TRAPPC12-218ENST00000479897 PLA2R1Q13018 1463 aa18.46■□□□□ 0.54
TRAPPC12-218ENST00000479897 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
TRAPPC12-218ENST00000479897 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
TRAPPC12-218ENST00000479897 PTPRMP28827 1452 aa18.44■□□□□ 0.54
TRAPPC12-218ENST00000479897 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
TRAPPC12-218ENST00000479897 NEURL4Q96JN8 1562 aa18.4■□□□□ 0.54
TRAPPC12-218ENST00000479897 KDM5AP29375 1690 aaKnown RBP18.39■□□□□ 0.53
TRAPPC12-218ENST00000479897 FOXD1Q16676 465 aa18.39■□□□□ 0.53
TRAPPC12-218ENST00000479897 MYO3AQ8NEV4 1616 aa18.38■□□□□ 0.53
TRAPPC12-218ENST00000479897 SETD1BQ9UPS6 1966 aaKnown RBP18.38■□□□□ 0.53
TRAPPC12-218ENST00000479897 CCDC144AA2RUR9 1427 aa18.38■□□□□ 0.53
TRAPPC12-218ENST00000479897 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC12-218ENST00000479897 KIF1BO60333 1816 aa18.37■□□□□ 0.53
TRAPPC12-218ENST00000479897 KDM4FA0A1W2PPD8 638 aa18.37■□□□□ 0.53
TRAPPC12-218ENST00000479897 UGGT1Q9NYU2 1555 aa18.37■□□□□ 0.53
TRAPPC12-218ENST00000479897 CCER1Q8TC90 406 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC12-218ENST00000479897 TNRQ92752 1358 aa18.36■□□□□ 0.53
TRAPPC12-218ENST00000479897 NLRP1Q9C000 1473 aa18.36■□□□□ 0.53
TRAPPC12-218ENST00000479897 ADGRB3O60242 1522 aa18.34■□□□□ 0.53
TRAPPC12-218ENST00000479897 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC12-218ENST00000479897 SLC52A1Q9NWF4 448 aa18.33■□□□□ 0.52
TRAPPC12-218ENST00000479897 TMEM131LA2VDJ0 1609 aa18.32■□□□□ 0.52
TRAPPC12-218ENST00000479897 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC12-218ENST00000479897 UBR1Q8IWV7 1749 aa18.31■□□□□ 0.52
TRAPPC12-218ENST00000479897 CEP170BQ9Y4F5 1589 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC12-218ENST00000479897 SPATA31E1Q6ZUB1 1445 aa18.3■□□□□ 0.52
TRAPPC12-218ENST00000479897 MYO5BQ9ULV0 1848 aa18.3■□□□□ 0.52
TRAPPC12-218ENST00000479897 A2ML1A8K2U0 1454 aa18.29■□□□□ 0.52
TRAPPC12-218ENST00000479897 IFT172Q9UG01 1749 aa18.28■□□□□ 0.52
TRAPPC12-218ENST00000479897 IDI1Q13907 227 aa18.25■□□□□ 0.51
TRAPPC12-218ENST00000479897 UHRF1BP1Q6BDS2 1440 aa18.24■□□□□ 0.51
TRAPPC12-218ENST00000479897 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
TRAPPC12-218ENST00000479897 PPLO60437 1756 aa18.24■□□□□ 0.51
TRAPPC12-218ENST00000479897 NEXMIFQ5QGS0 1516 aa18.22■□□□□ 0.51
TRAPPC12-218ENST00000479897 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
TRAPPC12-218ENST00000479897 SLIT1O75093 1534 aa18.21■□□□□ 0.51
TRAPPC12-218ENST00000479897 ARHGAP23Q9P227 1491 aa18.2■□□□□ 0.5
TRAPPC12-218ENST00000479897 MYOM2P54296 1465 aa18.19■□□□□ 0.5
TRAPPC12-218ENST00000479897 TONSLQ96HA7 1378 aa18.18■□□□□ 0.5
TRAPPC12-218ENST00000479897 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
TRAPPC12-218ENST00000479897 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
TRAPPC12-218ENST00000479897 RPGRIP1LQ68CZ1 1315 aa18.17■□□□□ 0.5
TRAPPC12-218ENST00000479897 LMTK3Q96Q04 1460 aa18.16■□□□□ 0.5
TRAPPC12-218ENST00000479897 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
TRAPPC12-218ENST00000479897 TMEM2Q9UHN6 1383 aa18.15■□□□□ 0.5
TRAPPC12-218ENST00000479897 NRXN1Q9ULB1 1477 aa18.14■□□□□ 0.5
TRAPPC12-218ENST00000479897 STAC3Q96MF2 364 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms