RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PLEKHH2Q8IVE3 1493 aa14.73□□□□□ -0.05
VPS52-217ENST00000478934 POLR1AO95602 1720 aaPredicted RBP14.73□□□□□ -0.05
VPS52-217ENST00000478934 KDM5DQ9BY66 1539 aa14.72□□□□□ -0.05
VPS52-217ENST00000478934 PLA2R1Q13018 1463 aa14.72□□□□□ -0.05
VPS52-217ENST00000478934 PREX2Q70Z35 1606 aa14.71□□□□□ -0.05
VPS52-217ENST00000478934 ARHGEF12Q9NZN5 1544 aa14.71□□□□□ -0.05
VPS52-217ENST00000478934 TMC1Q8TDI8 760 aa14.71□□□□□ -0.05
VPS52-217ENST00000478934 PNISRQ8TF01 805 aaKnown RBP14.71□□□□□ -0.05
VPS52-217ENST00000478934 CCDC144AA2RUR9 1427 aa14.7□□□□□ -0.06
VPS52-217ENST00000478934 SALL2Q9Y467 1007 aaPredicted RBP14.69□□□□□ -0.06
VPS52-217ENST00000478934 RSPH4AQ5TD94 716 aa14.69□□□□□ -0.06
VPS52-217ENST00000478934 PPP4R2Q9NY27 417 aa14.68□□□□□ -0.06
VPS52-217ENST00000478934 AFAP1Q8N556 730 aa14.67□□□□□ -0.06
VPS52-217ENST00000478934 PRAG1Q86YV5 1406 aa14.67□□□□□ -0.06
VPS52-217ENST00000478934 ARID4BQ4LE39 1312 aaPredicted RBP14.67□□□□□ -0.06
VPS52-217ENST00000478934 A2MP01023 1474 aa14.65□□□□□ -0.06
VPS52-217ENST00000478934 ABCC2Q92887 1545 aa14.65□□□□□ -0.06
VPS52-217ENST00000478934 SHROOM2Q13796 1616 aa14.64□□□□□ -0.07
VPS52-217ENST00000478934 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
VPS52-217ENST00000478934 CC2D1BQ5T0F9 858 aaKnown RBP14.63□□□□□ -0.07
VPS52-217ENST00000478934 DISP3Q9P2K9 1392 aa14.63□□□□□ -0.07
VPS52-217ENST00000478934 NUDCQ9Y266 331 aa14.62□□□□□ -0.07
VPS52-217ENST00000478934 EFCAB2Q5VUJ9 269 aa14.62□□□□□ -0.07
VPS52-217ENST00000478934 TESK2Q96S53 571 aa14.62□□□□□ -0.07
VPS52-217ENST00000478934 SMG6Q86US8 1419 aaKnown RBP14.61□□□□□ -0.07
VPS52-217ENST00000478934 PLCH2O75038 1416 aa14.61□□□□□ -0.07
VPS52-217ENST00000478934 MYBBP1AQ9BQG0 1328 aaKnown RBP14.61□□□□□ -0.07
VPS52-217ENST00000478934 PER1O15534 1290 aaPredicted RBP14.61□□□□□ -0.07
VPS52-217ENST00000478934 PANK3Q9H999 370 aa14.59□□□□□ -0.07
VPS52-217ENST00000478934 TRPM1Q7Z4N2 1603 aa14.59□□□□□ -0.07
VPS52-217ENST00000478934 UNC13BO14795 1591 aa14.59□□□□□ -0.07
VPS52-217ENST00000478934 MYO5CQ9NQX4 1742 aa14.59□□□□□ -0.07
VPS52-217ENST00000478934 RALBP1Q15311 655 aa14.58□□□□□ -0.08
VPS52-217ENST00000478934 ERICH6BQ5W0A0 696 aa14.58□□□□□ -0.08
VPS52-217ENST00000478934 MAST1Q9Y2H9 1570 aa14.58□□□□□ -0.08
VPS52-217ENST00000478934 ZCCHC11Q5TAX3 1644 aaKnown RBP14.57□□□□□ -0.08
VPS52-217ENST00000478934 SPAG9O60271 1321 aaKnown RBP14.57□□□□□ -0.08
VPS52-217ENST00000478934 MYT1LQ9UL68 1186 aa14.56□□□□□ -0.08
VPS52-217ENST00000478934 LRPPRCP42704 1394 aaKnown RBP14.56□□□□□ -0.08
VPS52-217ENST00000478934 DUOX2Q9NRD8 1548 aa14.55□□□□□ -0.08
VPS52-217ENST00000478934 BRD4O60885 1362 aaPredicted RBP14.55□□□□□ -0.08
VPS52-217ENST00000478934 GPRASP1Q5JY77 1395 aa14.55□□□□□ -0.08
VPS52-217ENST00000478934 IQGAP3Q86VI3 1631 aa14.55□□□□□ -0.08
VPS52-217ENST00000478934 KTN1Q86UP2 1357 aaKnown RBP14.54□□□□□ -0.08
VPS52-217ENST00000478934 CDCA7LQ96GN5 454 aa14.54□□□□□ -0.08
VPS52-217ENST00000478934 PLXNC1O60486 1568 aa14.54□□□□□ -0.08
VPS52-217ENST00000478934 PARD3Q8TEW0 1356 aa14.53□□□□□ -0.08
VPS52-217ENST00000478934 NLRP13Q86W25 1043 aa14.53□□□□□ -0.08
VPS52-217ENST00000478934 ERBINQ96RT1 1412 aa14.53□□□□□ -0.08
VPS52-217ENST00000478934 ERICH6Q7L0X2 663 aa14.53□□□□□ -0.08
VPS52-217ENST00000478934 RNF123Q5XPI4 1314 aa14.53□□□□□ -0.08
VPS52-217ENST00000478934 E9PCH4 1651 aa14.52□□□□□ -0.08
VPS52-217ENST00000478934 FANCIQ9NVI1 1328 aa14.52□□□□□ -0.08
VPS52-217ENST00000478934 ABCC1P33527 1531 aa14.51□□□□□ -0.09
VPS52-217ENST00000478934 CCDC136Q96JN2 1154 aa14.51□□□□□ -0.09
VPS52-217ENST00000478934 COL17A1Q9UMD9 1497 aaPredicted RBP14.51□□□□□ -0.09
VPS52-217ENST00000478934 CLASP1Q7Z460 1538 aa14.51□□□□□ -0.09
VPS52-217ENST00000478934 TMF1P82094 1093 aa14.51□□□□□ -0.09
VPS52-217ENST00000478934 KIF3BO15066 747 aa14.5□□□□□ -0.09
VPS52-217ENST00000478934 PRDM15P57071 1507 aaPredicted RBP14.5□□□□□ -0.09
VPS52-217ENST00000478934 MAGI2Q86UL8 1455 aa14.5□□□□□ -0.09
VPS52-217ENST00000478934 ATP10AO60312 1499 aa14.48□□□□□ -0.09
VPS52-217ENST00000478934 UHRF1BP1LA0JNW5 1464 aa14.47□□□□□ -0.09
VPS52-217ENST00000478934 SCAPERQ9BY12 1400 aa14.47□□□□□ -0.09
VPS52-217ENST00000478934 EXOC6Q8TAG9 804 aa14.47□□□□□ -0.09
VPS52-217ENST00000478934 PLIN1O60240 522 aa14.46□□□□□ -0.09
VPS52-217ENST00000478934 RRP1P56182 461 aaKnown RBP14.45□□□□□ -0.1
VPS52-217ENST00000478934 RCAN3Q9UKA8 241 aa14.45□□□□□ -0.1
VPS52-217ENST00000478934 ZFYVE16Q7Z3T8 1539 aa14.44□□□□□ -0.1
VPS52-217ENST00000478934 CFAP70Q5T0N1 1121 aa14.44□□□□□ -0.1
VPS52-217ENST00000478934 ADAMTS8Q9UP79 889 aa14.44□□□□□ -0.1
VPS52-217ENST00000478934 FANCAO15360 1455 aa14.43□□□□□ -0.1
VPS52-217ENST00000478934 UGGT1Q9NYU2 1555 aa14.43□□□□□ -0.1
VPS52-217ENST00000478934 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
VPS52-217ENST00000478934 WDR7Q9Y4E6 1490 aa14.42□□□□□ -0.1
VPS52-217ENST00000478934 KNSTRNQ9Y448 316 aa14.42□□□□□ -0.1
VPS52-217ENST00000478934 ADGRF5Q8IZF2 1346 aa14.41□□□□□ -0.1
VPS52-217ENST00000478934 CLTCL1P53675 1640 aa14.41□□□□□ -0.1
VPS52-217ENST00000478934 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
VPS52-217ENST00000478934 MADDQ8WXG6 1647 aa14.4□□□□□ -0.1
VPS52-217ENST00000478934 EIF2AK4Q9P2K8 1649 aaKnown RBP14.4□□□□□ -0.1
VPS52-217ENST00000478934 SKAP1Q86WV1 359 aa14.4□□□□□ -0.1
VPS52-217ENST00000478934 RTEL1-TNFRSF6BF6WH68 1400 aa14.4□□□□□ -0.1
VPS52-217ENST00000478934 PTPRTO14522 1441 aa14.4□□□□□ -0.1
VPS52-217ENST00000478934 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
VPS52-217ENST00000478934 LAMC1P11047 1609 aa14.39□□□□□ -0.11
VPS52-217ENST00000478934 NBR1Q14596 966 aa14.39□□□□□ -0.11
VPS52-217ENST00000478934 ADGRL1O94910 1474 aa14.39□□□□□ -0.11
VPS52-217ENST00000478934 CHGAP10645 457 aaKnown RBP14.39□□□□□ -0.11
VPS52-217ENST00000478934 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
VPS52-217ENST00000478934 TRPM2O94759 1503 aa14.38□□□□□ -0.11
VPS52-217ENST00000478934 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
VPS52-217ENST00000478934 ATP7AQ04656 1500 aa14.38□□□□□ -0.11
VPS52-217ENST00000478934 RNF17Q9BXT8 1623 aaKnown RBP14.38□□□□□ -0.11
VPS52-217ENST00000478934 BCL11AQ9H165 835 aa14.37□□□□□ -0.11
VPS52-217ENST00000478934 ASXL2Q76L83 1435 aa14.37□□□□□ -0.11
VPS52-217ENST00000478934 KANK1Q14678 1352 aa14.37□□□□□ -0.11
VPS52-217ENST00000478934 CCDC146Q8IYE0 955 aa14.36□□□□□ -0.11
VPS52-217ENST00000478934 SCAF11Q99590 1463 aaKnown RBP14.36□□□□□ -0.11
VPS52-217ENST00000478934 C20orf194Q5TEA3 1177 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms