RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 KIF15Q9NS87 1388 aa17.65■□□□□ 0.42
DFFB-209ENST00000477548 BRD4O60885 1362 aaPredicted RBP17.64■□□□□ 0.41
DFFB-209ENST00000477548 MYBBP1AQ9BQG0 1328 aaKnown RBP17.64■□□□□ 0.41
DFFB-209ENST00000477548 PLIN1O60240 522 aa17.64■□□□□ 0.41
DFFB-209ENST00000477548 ZNF777Q9ULD5 760 aaPredicted RBP17.64■□□□□ 0.41
DFFB-209ENST00000477548 ROCK2O75116 1388 aaKnown RBP17.64■□□□□ 0.41
DFFB-209ENST00000477548 PDE4CQ08493 712 aa17.64■□□□□ 0.41
DFFB-209ENST00000477548 NUP160Q12769 1436 aa17.63■□□□□ 0.41
DFFB-209ENST00000477548 PDE3BQ13370 1112 aa17.63■□□□□ 0.41
DFFB-209ENST00000477548 FAM43AQ8N2R8 423 aa17.63■□□□□ 0.41
DFFB-209ENST00000477548 BCORL1Q5H9F3 1711 aa17.63■□□□□ 0.41
DFFB-209ENST00000477548 CRBNQ96SW2 442 aa17.61■□□□□ 0.41
DFFB-209ENST00000477548 FRAT2O75474 233 aaPredicted RBP17.61■□□□□ 0.41
DFFB-209ENST00000477548 RALBP1Q15311 655 aa17.61■□□□□ 0.41
DFFB-209ENST00000477548 PDIA4P13667 645 aaKnown RBP17.6■□□□□ 0.41
DFFB-209ENST00000477548 CDCA7LQ96GN5 454 aa17.6■□□□□ 0.41
DFFB-209ENST00000477548 A0A0U1RQG5 324 aaPredicted RBP17.57■□□□□ 0.4
DFFB-209ENST00000477548 ABCC5O15440 1437 aa17.57■□□□□ 0.4
DFFB-209ENST00000477548 KIF14Q15058 1648 aa17.57■□□□□ 0.4
DFFB-209ENST00000477548 CFDP1Q9UEE9 299 aaPredicted RBP17.57■□□□□ 0.4
DFFB-209ENST00000477548 DAPK1P53355 1430 aa17.56■□□□□ 0.4
DFFB-209ENST00000477548 KTN1Q86UP2 1357 aaKnown RBP17.56■□□□□ 0.4
DFFB-209ENST00000477548 DCAF11Q8TEB1 546 aa17.56■□□□□ 0.4
DFFB-209ENST00000477548 CARMIL2Q6F5E8 1435 aa17.55■□□□□ 0.4
DFFB-209ENST00000477548 TROQ12816 1431 aaPredicted RBP17.54■□□□□ 0.4
DFFB-209ENST00000477548 FAM161AQ3B820 660 aa17.54■□□□□ 0.4
DFFB-209ENST00000477548 CARD11Q9BXL7 1154 aa17.54■□□□□ 0.4
DFFB-209ENST00000477548 ROCK1Q13464 1354 aa17.54■□□□□ 0.4
DFFB-209ENST00000477548 NLRP13Q86W25 1043 aa17.53■□□□□ 0.4
DFFB-209ENST00000477548 KDM5CP41229 1560 aa17.53■□□□□ 0.4
DFFB-209ENST00000477548 MBD5Q9P267 1494 aa17.52■□□□□ 0.4
DFFB-209ENST00000477548 GPATCH8Q9UKJ3 1502 aaKnown RBP17.51■□□□□ 0.39
DFFB-209ENST00000477548 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
DFFB-209ENST00000477548 ATP10BO94823 1461 aa17.5■□□□□ 0.39
DFFB-209ENST00000477548 C8orf34Q49A92 452 aa17.49■□□□□ 0.39
DFFB-209ENST00000477548 ST20-MTHFSA0A0A6YYL1 179 aa17.49■□□□□ 0.39
DFFB-209ENST00000477548 C20orf194Q5TEA3 1177 aa17.49■□□□□ 0.39
DFFB-209ENST00000477548 PLEKHD1A6NEE1 506 aa17.48■□□□□ 0.39
DFFB-209ENST00000477548 KDM2BQ8NHM5 1336 aa17.48■□□□□ 0.39
DFFB-209ENST00000477548 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
DFFB-209ENST00000477548 CAMSAP2Q08AD1 1489 aa17.48■□□□□ 0.39
DFFB-209ENST00000477548 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
DFFB-209ENST00000477548 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
DFFB-209ENST00000477548 DNMT1P26358 1616 aaKnown RBP17.46■□□□□ 0.39
DFFB-209ENST00000477548 RGS3P49796 1198 aa17.46■□□□□ 0.39
DFFB-209ENST00000477548 ZMYND15Q9H091 742 aa17.46■□□□□ 0.39
DFFB-209ENST00000477548 PZPP20742 1482 aa17.46■□□□□ 0.39
DFFB-209ENST00000477548 ABCA8O94911 1581 aa17.45■□□□□ 0.38
DFFB-209ENST00000477548 PTPRGP23470 1445 aa17.45■□□□□ 0.38
DFFB-209ENST00000477548 FGD1P98174 961 aa17.45■□□□□ 0.38
DFFB-209ENST00000477548 PKD2Q13563 968 aa17.45■□□□□ 0.38
DFFB-209ENST00000477548 KIAA1107Q9UPP5 1409 aa17.45■□□□□ 0.38
DFFB-209ENST00000477548 ERCC6L2Q5T890 1561 aa17.44■□□□□ 0.38
DFFB-209ENST00000477548 CHD1O14646 1710 aa17.44■□□□□ 0.38
DFFB-209ENST00000477548 POGKQ9P215 609 aa17.44■□□□□ 0.38
DFFB-209ENST00000477548 KDM2AQ9Y2K7 1162 aa17.43■□□□□ 0.38
DFFB-209ENST00000477548 RALGAPBQ86X10 1494 aa17.43■□□□□ 0.38
DFFB-209ENST00000477548 RRAGDQ9NQL2 400 aaPredicted RBP17.42■□□□□ 0.38
DFFB-209ENST00000477548 PARD3Q8TEW0 1356 aa17.42■□□□□ 0.38
DFFB-209ENST00000477548 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.383e-6■■■■□ 21.2
DFFB-209ENST00000477548 L1TD1Q5T7N2 865 aaKnown RBP17.4■□□□□ 0.38
DFFB-209ENST00000477548 UHRF1BP1Q6BDS2 1440 aa17.39■□□□□ 0.37
DFFB-209ENST00000477548 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
DFFB-209ENST00000477548 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
DFFB-209ENST00000477548 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.36■□□□□ 0.37
DFFB-209ENST00000477548 BLMP54132 1417 aaPredicted RBP17.36■□□□□ 0.37
DFFB-209ENST00000477548 CDC42BPAQ5VT25 1732 aa17.36■□□□□ 0.37
DFFB-209ENST00000477548 NAP1L5Q96NT1 182 aaPredicted RBP17.36■□□□□ 0.37
DFFB-209ENST00000477548 ARXQ96QS3 562 aa17.36■□□□□ 0.37
DFFB-209ENST00000477548 ADCY10Q96PN6 1610 aa17.35■□□□□ 0.37
DFFB-209ENST00000477548 SLKQ9H2G2 1235 aaPredicted RBP17.35■□□□□ 0.37
DFFB-209ENST00000477548 BECN1Q14457 450 aa17.34■□□□□ 0.37
DFFB-209ENST00000477548 E9PCH4 1651 aa17.34■□□□□ 0.37
DFFB-209ENST00000477548 VSIG10Q8N0Z9 540 aa17.34■□□□□ 0.37
DFFB-209ENST00000477548 PLEKHH2Q8IVE3 1493 aa17.34■□□□□ 0.37
DFFB-209ENST00000477548 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.37
DFFB-209ENST00000477548 PER1O15534 1290 aaPredicted RBP17.32■□□□□ 0.36
DFFB-209ENST00000477548 PNNQ9H307 717 aaKnown RBP17.32■□□□□ 0.36
DFFB-209ENST00000477548 INSRP06213 1382 aa17.32■□□□□ 0.36
DFFB-209ENST00000477548 ZMYM4Q5VZL5 1548 aa17.31■□□□□ 0.36
DFFB-209ENST00000477548 AAMPQ13685 434 aa17.31■□□□□ 0.36
DFFB-209ENST00000477548 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
DFFB-209ENST00000477548 RBM10P98175 930 aaKnown RBP17.29■□□□□ 0.36
DFFB-209ENST00000477548 DUSP27Q5VZP5 1158 aa17.29■□□□□ 0.36
DFFB-209ENST00000477548 ANKRD30AQ9BXX3 1397 aa17.29■□□□□ 0.36
DFFB-209ENST00000477548 C9orf84Q5VXU9 1444 aa17.29■□□□□ 0.36
DFFB-209ENST00000477548 HSP90AA2PQ14568 343 aaPredicted RBP17.29■□□□□ 0.36
DFFB-209ENST00000477548 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
DFFB-209ENST00000477548 ARHGEF12Q9NZN5 1544 aa17.29■□□□□ 0.36
DFFB-209ENST00000477548 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
DFFB-209ENST00000477548 TSPY4P0CV99 314 aa17.27■□□□□ 0.36
DFFB-209ENST00000477548 TSPY10P0CW01 314 aa17.27■□□□□ 0.36
DFFB-209ENST00000477548 USP19O94966 1318 aa17.27■□□□□ 0.35
DFFB-209ENST00000477548 GOLGA6L3A6NEY3 463 aa17.27■□□□□ 0.35
DFFB-209ENST00000477548 NUP155O75694 1391 aa17.26■□□□□ 0.35
DFFB-209ENST00000477548 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
DFFB-209ENST00000477548 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
DFFB-209ENST00000477548 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
DFFB-209ENST00000477548 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
DFFB-209ENST00000477548 PANK3Q9H999 370 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms