RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 KIF3BO15066 747 aa19.2■□□□□ 0.66
APTX-220ENST00000476858 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
APTX-220ENST00000476858 C3P01024 1663 aa19.18■□□□□ 0.66
APTX-220ENST00000476858 CLTCQ00610 1675 aaKnown RBP19.18■□□□□ 0.66
APTX-220ENST00000476858 MROH1Q8NDA8 1641 aa19.17■□□□□ 0.66
APTX-220ENST00000476858 ITGAEP38570 1179 aa19.16■□□□□ 0.66
APTX-220ENST00000476858 NCOA1Q15788 1441 aa19.16■□□□□ 0.66
APTX-220ENST00000476858 RRBP1Q9P2E9 1410 aaKnown RBP19.15■□□□□ 0.66
APTX-220ENST00000476858 DUOX2Q9NRD8 1548 aa19.15■□□□□ 0.66
APTX-220ENST00000476858 ADGRL2O95490 1459 aa19.14■□□□□ 0.65
APTX-220ENST00000476858 RNF17Q9BXT8 1623 aaKnown RBP19.13■□□□□ 0.65
APTX-220ENST00000476858 LMTK3Q96Q04 1460 aa19.11■□□□□ 0.65
APTX-220ENST00000476858 ZMYM3Q14202 1370 aa19.11■□□□□ 0.65
APTX-220ENST00000476858 EIF2AK4Q9P2K8 1649 aaKnown RBP19.11■□□□□ 0.65
APTX-220ENST00000476858 ANKRD30AQ9BXX3 1397 aa19.1■□□□□ 0.65
APTX-220ENST00000476858 MROH2AA6NES4 1674 aa19.1■□□□□ 0.65
APTX-220ENST00000476858 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.65
APTX-220ENST00000476858 HSPA2P54652 639 aa19.08■□□□□ 0.64
APTX-220ENST00000476858 ESF1Q9H501 851 aaKnown RBP19.08■□□□□ 0.64
APTX-220ENST00000476858 ERBINQ96RT1 1412 aa19.08■□□□□ 0.64
APTX-220ENST00000476858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.07■□□□□ 0.64
APTX-220ENST00000476858 KDM5DQ9BY66 1539 aa19.07■□□□□ 0.64
APTX-220ENST00000476858 ABCC3O15438 1527 aa19.06■□□□□ 0.64
APTX-220ENST00000476858 CEP152O94986 1710 aa19.06■□□□□ 0.64
APTX-220ENST00000476858 FBXO31Q5XUX0 539 aaPredicted RBP19.06■□□□□ 0.64
APTX-220ENST00000476858 WASHC2CQ9Y4E1 1318 aa19.04■□□□□ 0.64
APTX-220ENST00000476858 DEPDC5O75140 1603 aa19.04■□□□□ 0.64
APTX-220ENST00000476858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.64
APTX-220ENST00000476858 PRDM15P57071 1507 aaPredicted RBP19.03■□□□□ 0.64
APTX-220ENST00000476858 PREX1Q8TCU6 1659 aa19.02■□□□□ 0.64
APTX-220ENST00000476858 ANKRD50Q9ULJ7 1429 aa19.02■□□□□ 0.64
APTX-220ENST00000476858 ROCK1Q13464 1354 aa19.01■□□□□ 0.63
APTX-220ENST00000476858 VWDEQ8N2E2 1590 aa18.99■□□□□ 0.63
APTX-220ENST00000476858 CAMSAP1Q5T5Y3 1602 aa18.99■□□□□ 0.63
APTX-220ENST00000476858 PZPP20742 1482 aa18.98■□□□□ 0.63
APTX-220ENST00000476858 NPATQ14207 1427 aa18.98■□□□□ 0.63
APTX-220ENST00000476858 FAM135AQ9P2D6 1515 aa18.97■□□□□ 0.63
APTX-220ENST00000476858 ZC3H13Q5T200 1668 aaKnown RBP18.97■□□□□ 0.63
APTX-220ENST00000476858 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
APTX-220ENST00000476858 UHRF1BP1Q6BDS2 1440 aa18.96■□□□□ 0.63
APTX-220ENST00000476858 NAIPQ13075 1403 aa18.94■□□□□ 0.62
APTX-220ENST00000476858 UNC13BO14795 1591 aa18.93■□□□□ 0.62
APTX-220ENST00000476858 TNRQ92752 1358 aa18.92■□□□□ 0.62
APTX-220ENST00000476858 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
APTX-220ENST00000476858 LMTK2Q8IWU2 1503 aa18.91■□□□□ 0.62
APTX-220ENST00000476858 CFAP65Q6ZU64 1925 aaKnown RBP18.91■□□□□ 0.62
APTX-220ENST00000476858 SETD1BQ9UPS6 1966 aaKnown RBP18.91■□□□□ 0.62
APTX-220ENST00000476858 SPATA31D1Q6ZQQ2 1576 aa18.9■□□□□ 0.62
APTX-220ENST00000476858 CEP170BQ9Y4F5 1589 aaPredicted RBP18.89■□□□□ 0.62
APTX-220ENST00000476858 ZNF142P52746 1687 aaPredicted RBP18.89■□□□□ 0.61
APTX-220ENST00000476858 GCC2Q8IWJ2 1684 aa18.89■□□□□ 0.61
APTX-220ENST00000476858 STRCQ7RTU9 1775 aa18.89■□□□□ 0.61
APTX-220ENST00000476858 KANK1Q14678 1352 aa18.88■□□□□ 0.61
APTX-220ENST00000476858 EFCAB6Q5THR3 1501 aa18.88■□□□□ 0.61
APTX-220ENST00000476858 ARHGAP31Q2M1Z3 1444 aa18.87■□□□□ 0.61
APTX-220ENST00000476858 HFM1A2PYH4 1435 aa18.86■□□□□ 0.61
APTX-220ENST00000476858 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
APTX-220ENST00000476858 IQGAP3Q86VI3 1631 aa18.85■□□□□ 0.61
APTX-220ENST00000476858 SYNMO15061 1565 aa18.85■□□□□ 0.61
APTX-220ENST00000476858 PPP4R3CPQ6ZMV5 832 aa18.84■□□□□ 0.61
APTX-220ENST00000476858 NUP155O75694 1391 aa18.83■□□□□ 0.61
APTX-220ENST00000476858 TET3O43151 1660 aa18.83■□□□□ 0.61
APTX-220ENST00000476858 E9PCH4 1651 aa18.82■□□□□ 0.6
APTX-220ENST00000476858 NCKAP5LQ9HCH0 1330 aa18.82■□□□□ 0.6
APTX-220ENST00000476858 NOS1P29475 1434 aa18.81■□□□□ 0.6
APTX-220ENST00000476858 UGGT1Q9NYU2 1555 aa18.8■□□□□ 0.6
APTX-220ENST00000476858 NLRP1Q9C000 1473 aa18.79■□□□□ 0.6
APTX-220ENST00000476858 PIK3C2BO00750 1634 aa18.78■□□□□ 0.6
APTX-220ENST00000476858 DCAF8L1A6NGE4 600 aa18.76■□□□□ 0.59
APTX-220ENST00000476858 IDI1Q13907 227 aa18.76■□□□□ 0.59
APTX-220ENST00000476858 UBR1Q8IWV7 1749 aa18.76■□□□□ 0.59
APTX-220ENST00000476858 NEURL4Q96JN8 1562 aa18.74■□□□□ 0.59
APTX-220ENST00000476858 PLA2R1Q13018 1463 aa18.73■□□□□ 0.59
APTX-220ENST00000476858 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
APTX-220ENST00000476858 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
APTX-220ENST00000476858 TRIM52Q96A61 297 aa18.73■□□□□ 0.59
APTX-220ENST00000476858 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
APTX-220ENST00000476858 RAB3GAP2Q9H2M9 1393 aa18.68■□□□□ 0.58
APTX-220ENST00000476858 PTPRTO14522 1441 aa18.68■□□□□ 0.58
APTX-220ENST00000476858 LTKP29376 864 aa18.68■□□□□ 0.58
APTX-220ENST00000476858 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
APTX-220ENST00000476858 MYO5BQ9ULV0 1848 aa18.67■□□□□ 0.58
APTX-220ENST00000476858 PKD2Q13563 968 aa18.67■□□□□ 0.58
APTX-220ENST00000476858 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
APTX-220ENST00000476858 ADGRB3O60242 1522 aa18.67■□□□□ 0.58
APTX-220ENST00000476858 ARHGAP23Q9P227 1491 aa18.66■□□□□ 0.58
APTX-220ENST00000476858 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
APTX-220ENST00000476858 TMEM131LA2VDJ0 1609 aa18.65■□□□□ 0.58
APTX-220ENST00000476858 SLIT1O75093 1534 aa18.64■□□□□ 0.58
APTX-220ENST00000476858 SLC4A1APQ9BWU0 796 aaKnown RBP18.64■□□□□ 0.57
APTX-220ENST00000476858 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
APTX-220ENST00000476858 TMEM2Q9UHN6 1383 aa18.63■□□□□ 0.57
APTX-220ENST00000476858 HOXD11P31277 338 aaPredicted RBP18.62■□□□□ 0.57
APTX-220ENST00000476858 ANKLE2Q86XL3 938 aa18.62■□□□□ 0.57
APTX-220ENST00000476858 SLC52A1Q9NWF4 448 aa18.62■□□□□ 0.57
APTX-220ENST00000476858 ZNF335Q9H4Z2 1342 aaPredicted RBP18.62■□□□□ 0.57
APTX-220ENST00000476858 NPHP4O75161 1426 aaPredicted RBP18.61■□□□□ 0.57
APTX-220ENST00000476858 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
APTX-220ENST00000476858 KDM5AP29375 1690 aaKnown RBP18.6■□□□□ 0.57
APTX-220ENST00000476858 LTBP4Q8N2S1 1624 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms