RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 ADGBQ8N7X0 1667 aa33.11■■■□□ 2.89
HDAC11-217ENST00000475818 POLR1AO95602 1720 aaPredicted RBP33.1■■■□□ 2.89
HDAC11-217ENST00000475818 ZNF644Q9H582 1327 aaPredicted RBP33.09■■■□□ 2.89
HDAC11-217ENST00000475818 SENP3Q9H4L4 574 aaPredicted RBP33.07■■■□□ 2.88
HDAC11-217ENST00000475818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.04■■■□□ 2.88
HDAC11-217ENST00000475818 ANKLE2Q86XL3 938 aa33.03■■■□□ 2.88
HDAC11-217ENST00000475818 VWDEQ8N2E2 1590 aa33.02■■■□□ 2.88
HDAC11-217ENST00000475818 CHIC1Q5VXU3 224 aa33.02■■■□□ 2.88
HDAC11-217ENST00000475818 MTUS2Q5JR59 1369 aa33.01■■■□□ 2.88
HDAC11-217ENST00000475818 DHX29Q7Z478 1369 aaKnown RBP33.01■■■□□ 2.88
HDAC11-217ENST00000475818 KIF3BO15066 747 aa33■■■□□ 2.87
HDAC11-217ENST00000475818 ALKQ9UM73 1620 aa32.99■■■□□ 2.87
HDAC11-217ENST00000475818 PZPP20742 1482 aa32.99■■■□□ 2.87
HDAC11-217ENST00000475818 MBD5Q9P267 1494 aa32.99■■■□□ 2.87
HDAC11-217ENST00000475818 NPHP4O75161 1426 aaPredicted RBP32.96■■■□□ 2.87
HDAC11-217ENST00000475818 RTEL1-TNFRSF6BF6WH68 1400 aa32.95■■■□□ 2.87
HDAC11-217ENST00000475818 THEMISQ8N1K5 641 aaPredicted RBP32.95■■■□□ 2.87
HDAC11-217ENST00000475818 KDM5DQ9BY66 1539 aa32.95■■■□□ 2.87
HDAC11-217ENST00000475818 TIAM1Q13009 1591 aa32.94■■■□□ 2.86
HDAC11-217ENST00000475818 WASHC2CQ9Y4E1 1318 aa32.93■■■□□ 2.86
HDAC11-217ENST00000475818 MIA2Q96PC5 1412 aa32.91■■■□□ 2.86
HDAC11-217ENST00000475818 UGGT1Q9NYU2 1555 aa32.9■■■□□ 2.86
HDAC11-217ENST00000475818 FAM135AQ9P2D6 1515 aa32.88■■■□□ 2.85
HDAC11-217ENST00000475818 MED14O60244 1454 aa32.88■■■□□ 2.85
HDAC11-217ENST00000475818 NLRP1Q9C000 1473 aa32.87■■■□□ 2.85
HDAC11-217ENST00000475818 DEPDC5O75140 1603 aa32.85■■■□□ 2.85
HDAC11-217ENST00000475818 LRRC7Q96NW7 1537 aa32.83■■■□□ 2.85
HDAC11-217ENST00000475818 IQGAP1P46940 1657 aa32.82■■■□□ 2.84
HDAC11-217ENST00000475818 CCDC141Q6ZP82 1450 aa32.8■■■□□ 2.84
HDAC11-217ENST00000475818 EHBP1L1Q8N3D4 1523 aa32.8■■■□□ 2.84
HDAC11-217ENST00000475818 STRCP1A6NGW2 1772 aa32.79■■■□□ 2.84
HDAC11-217ENST00000475818 RNF17Q9BXT8 1623 aaKnown RBP32.77■■■□□ 2.84
HDAC11-217ENST00000475818 CEP162Q5TB80 1403 aa32.76■■■□□ 2.83
HDAC11-217ENST00000475818 RGS17Q9UGC6 210 aaPredicted RBP32.75■■■□□ 2.83
HDAC11-217ENST00000475818 CAMSAP2Q08AD1 1489 aa32.74■■■□□ 2.83
HDAC11-217ENST00000475818 SYNMO15061 1565 aa32.73■■■□□ 2.83
HDAC11-217ENST00000475818 RSPH4AQ5TD94 716 aa32.66■■■□□ 2.82
HDAC11-217ENST00000475818 ABCC3O15438 1527 aa32.65■■■□□ 2.82
HDAC11-217ENST00000475818 ERVK-7P63135 1459 aa32.63■■■□□ 2.81
HDAC11-217ENST00000475818 NCOA2Q15596 1464 aa32.63■■■□□ 2.81
HDAC11-217ENST00000475818 TSPY4P0CV99 314 aa32.62■■■□□ 2.81
HDAC11-217ENST00000475818 TSPY10P0CW01 314 aa32.62■■■□□ 2.81
HDAC11-217ENST00000475818 ZC3H13Q5T200 1668 aaKnown RBP32.61■■■□□ 2.81
HDAC11-217ENST00000475818 SCAF11Q99590 1463 aaKnown RBP32.59■■■□□ 2.81
HDAC11-217ENST00000475818 ARHGEF5Q12774 1597 aa32.57■■■□□ 2.8
HDAC11-217ENST00000475818 LTKP29376 864 aa32.55■■■□□ 2.8
HDAC11-217ENST00000475818 POTEAQ6S8J7 498 aa32.54■■■□□ 2.8
HDAC11-217ENST00000475818 TXNDC2Q86VQ3 553 aa32.53■■■□□ 2.8
HDAC11-217ENST00000475818 UBR1Q8IWV7 1749 aa32.53■■■□□ 2.8
HDAC11-217ENST00000475818 XIRP1Q702N8 1843 aaKnown RBP32.48■■■□□ 2.79
HDAC11-217ENST00000475818 MROH1Q8NDA8 1641 aa32.48■■■□□ 2.79
HDAC11-217ENST00000475818 ARHGAP23Q9P227 1491 aa32.47■■■□□ 2.79
HDAC11-217ENST00000475818 FAM135BQ49AJ0 1406 aa32.46■■■□□ 2.79
HDAC11-217ENST00000475818 CEP152O94986 1710 aa32.46■■■□□ 2.79
HDAC11-217ENST00000475818 SLIT1O75093 1534 aa32.45■■■□□ 2.78
HDAC11-217ENST00000475818 EIF2AK4Q9P2K8 1649 aaKnown RBP32.44■■■□□ 2.78
HDAC11-217ENST00000475818 EID1Q9Y6B2 187 aa32.43■■■□□ 2.78
HDAC11-217ENST00000475818 CFAP65Q6ZU64 1925 aaKnown RBP32.43■■■□□ 2.78
HDAC11-217ENST00000475818 MAST1Q9Y2H9 1570 aa32.42■■■□□ 2.78
HDAC11-217ENST00000475818 TMEM94Q12767 1356 aa32.4■■■□□ 2.78
HDAC11-217ENST00000475818 RBM33Q96EV2 1170 aaKnown RBP32.37■■■□□ 2.77
HDAC11-217ENST00000475818 ROBO1Q9Y6N7 1651 aa32.34■■■□□ 2.77
HDAC11-217ENST00000475818 TMEM2Q9UHN6 1383 aa32.33■■■□□ 2.77
HDAC11-217ENST00000475818 STAG3Q9UJ98 1225 aa32.32■■■□□ 2.76
HDAC11-217ENST00000475818 PROSER2Q86WR7 435 aaPredicted RBP32.31■■■□□ 2.76
HDAC11-217ENST00000475818 SETD1AO15047 1707 aaKnown RBP32.31■■■□□ 2.76
HDAC11-217ENST00000475818 PIK3C2BO00750 1634 aa32.3■■■□□ 2.76
HDAC11-217ENST00000475818 ARHGAP31Q2M1Z3 1444 aa32.3■■■□□ 2.76
HDAC11-217ENST00000475818 DUOX2Q9NRD8 1548 aa32.3■■■□□ 2.76
HDAC11-217ENST00000475818 KCNA6P17658 529 aa32.29■■■□□ 2.76
HDAC11-217ENST00000475818 SLC26A8Q96RN1 970 aa32.29■■■□□ 2.76
HDAC11-217ENST00000475818 MAP3K1Q13233 1512 aa32.29■■■□□ 2.76
HDAC11-217ENST00000475818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.27■■■□□ 2.76
HDAC11-217ENST00000475818 LRRC9Q6ZRR7 1453 aa32.25■■■□□ 2.75
HDAC11-217ENST00000475818 PRDM15P57071 1507 aaPredicted RBP32.25■■■□□ 2.75
HDAC11-217ENST00000475818 KIF15Q9NS87 1388 aa32.22■■■□□ 2.75
HDAC11-217ENST00000475818 EFCAB6Q5THR3 1501 aa32.21■■■□□ 2.75
HDAC11-217ENST00000475818 RRP7BPQ9NSQ0 103 aa32.19■■■□□ 2.74
HDAC11-217ENST00000475818 MYOM3Q5VTT5 1437 aa32.18■■■□□ 2.74
HDAC11-217ENST00000475818 IDI1Q13907 227 aa32.18■■■□□ 2.74
HDAC11-217ENST00000475818 MSH6P52701 1360 aa32.17■■■□□ 2.74
HDAC11-217ENST00000475818 JCADQ9P266 1359 aa32.17■■■□□ 2.74
HDAC11-217ENST00000475818 ERBINQ96RT1 1412 aa32.17■■■□□ 2.74
HDAC11-217ENST00000475818 TET3O43151 1660 aa32.16■■■□□ 2.74
HDAC11-217ENST00000475818 KANK4Q5T7N3 995 aaPredicted RBP32.15■■■□□ 2.74
HDAC11-217ENST00000475818 BCANQ96GW7 911 aa32.15■■■□□ 2.74
HDAC11-217ENST00000475818 SLAIN2Q9P270 581 aa32.15■■■□□ 2.74
HDAC11-217ENST00000475818 PHLPP1O60346 1717 aa32.14■■■□□ 2.74
HDAC11-217ENST00000475818 NKTRP30414 1462 aaKnown RBP32.14■■■□□ 2.74
HDAC11-217ENST00000475818 KANK1Q14678 1352 aa32.13■■■□□ 2.73
HDAC11-217ENST00000475818 NWD1Q149M9 1564 aa32.11■■■□□ 2.73
HDAC11-217ENST00000475818 KDM5AP29375 1690 aaKnown RBP32.08■■■□□ 2.73
HDAC11-217ENST00000475818 ABCC5O15440 1437 aa32.08■■■□□ 2.73
HDAC11-217ENST00000475818 UPF1Q92900 1129 aaKnown RBP eCLIP32.06■■■□□ 2.728e-9■■■■■ 30.2
HDAC11-217ENST00000475818 TRIM52Q96A61 297 aa32.06■■■□□ 2.72
HDAC11-217ENST00000475818 VPS8Q8N3P4 1428 aa32.06■■■□□ 2.72
HDAC11-217ENST00000475818 MEX3CQ5U5Q3 659 aaKnown RBP32.05■■■□□ 2.72
HDAC11-217ENST00000475818 ADGRB3O60242 1522 aa32.05■■■□□ 2.72
HDAC11-217ENST00000475818 LRP6O75581 1613 aa32.04■■■□□ 2.72
HDAC11-217ENST00000475818 CROCC2H7BZ55 1655 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms