RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 NCOA1Q15788 1441 aa24.86■■□□□ 1.57
SRM-204ENST00000475189 RRBP1Q9P2E9 1410 aaKnown RBP24.86■■□□□ 1.57
SRM-204ENST00000475189 MROH2AA6NES4 1674 aa24.86■■□□□ 1.57
SRM-204ENST00000475189 PPP6R1Q9UPN7 881 aa24.86■■□□□ 1.57
SRM-204ENST00000475189 RNF17Q9BXT8 1623 aaKnown RBP24.83■■□□□ 1.57
SRM-204ENST00000475189 ERBINQ96RT1 1412 aa24.81■■□□□ 1.56
SRM-204ENST00000475189 SETD1BQ9UPS6 1966 aaKnown RBP24.8■■□□□ 1.56
SRM-204ENST00000475189 ZMYM3Q14202 1370 aa24.8■■□□□ 1.56
SRM-204ENST00000475189 FAM135AQ9P2D6 1515 aa24.78■■□□□ 1.56
SRM-204ENST00000475189 ITGAEP38570 1179 aa24.78■■□□□ 1.56
SRM-204ENST00000475189 MROH1Q8NDA8 1641 aa24.78■■□□□ 1.56
SRM-204ENST00000475189 KDM5DQ9BY66 1539 aa24.76■■□□□ 1.55
SRM-204ENST00000475189 ROCK1Q13464 1354 aa24.75■■□□□ 1.55
SRM-204ENST00000475189 WASHC2CQ9Y4E1 1318 aa24.74■■□□□ 1.55
SRM-204ENST00000475189 PREX1Q8TCU6 1659 aa24.73■■□□□ 1.55
SRM-204ENST00000475189 DEPDC5O75140 1603 aa24.72■■□□□ 1.55
SRM-204ENST00000475189 LMTK3Q96Q04 1460 aa24.72■■□□□ 1.55
SRM-204ENST00000475189 ZC3H13Q5T200 1668 aaKnown RBP24.72■■□□□ 1.55
SRM-204ENST00000475189 ABCC3O15438 1527 aa24.71■■□□□ 1.55
SRM-204ENST00000475189 PRDM15P57071 1507 aaPredicted RBP24.71■■□□□ 1.55
SRM-204ENST00000475189 ANKRD50Q9ULJ7 1429 aa24.7■■□□□ 1.55
SRM-204ENST00000475189 CEP152O94986 1710 aa24.7■■□□□ 1.54
SRM-204ENST00000475189 ILDR1Q86SU0 546 aaPredicted RBP24.7■■□□□ 1.54
SRM-204ENST00000475189 NPATQ14207 1427 aa24.69■■□□□ 1.54
SRM-204ENST00000475189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.65■■□□□ 1.54
SRM-204ENST00000475189 PZPP20742 1482 aa24.64■■□□□ 1.54
SRM-204ENST00000475189 CAMSAP1Q5T5Y3 1602 aa24.64■■□□□ 1.53
SRM-204ENST00000475189 UHRF1BP1Q6BDS2 1440 aa24.63■■□□□ 1.53
SRM-204ENST00000475189 CFAP65Q6ZU64 1925 aaKnown RBP24.63■■□□□ 1.53
SRM-204ENST00000475189 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
SRM-204ENST00000475189 FBXO31Q5XUX0 539 aaPredicted RBP24.62■■□□□ 1.53
SRM-204ENST00000475189 KANK1Q14678 1352 aa24.62■■□□□ 1.53
SRM-204ENST00000475189 HSPA2P54652 639 aa24.6■■□□□ 1.53
SRM-204ENST00000475189 LMTK2Q8IWU2 1503 aa24.58■■□□□ 1.53
SRM-204ENST00000475189 UNC13BO14795 1591 aa24.58■■□□□ 1.52
SRM-204ENST00000475189 MYO3AQ8NEV4 1616 aa24.57■■□□□ 1.52
SRM-204ENST00000475189 ARHGAP31Q2M1Z3 1444 aa24.56■■□□□ 1.52
SRM-204ENST00000475189 GCC2Q8IWJ2 1684 aa24.56■■□□□ 1.52
SRM-204ENST00000475189 TNRQ92752 1358 aa24.55■■□□□ 1.52
SRM-204ENST00000475189 NAIPQ13075 1403 aa24.55■■□□□ 1.52
SRM-204ENST00000475189 ZNF142P52746 1687 aaPredicted RBP24.54■■□□□ 1.52
SRM-204ENST00000475189 SPATA31D1Q6ZQQ2 1576 aa24.53■■□□□ 1.52
SRM-204ENST00000475189 ERVK-7P63135 1459 aa24.52■■□□□ 1.52
SRM-204ENST00000475189 HFM1A2PYH4 1435 aa24.51■■□□□ 1.51
SRM-204ENST00000475189 CEP170BQ9Y4F5 1589 aaPredicted RBP24.5■■□□□ 1.51
SRM-204ENST00000475189 EFCAB6Q5THR3 1501 aa24.5■■□□□ 1.51
SRM-204ENST00000475189 TET3O43151 1660 aa24.49■■□□□ 1.51
SRM-204ENST00000475189 A2ML1A8K2U0 1454 aa24.48■■□□□ 1.51
SRM-204ENST00000475189 IQGAP3Q86VI3 1631 aa24.48■■□□□ 1.51
SRM-204ENST00000475189 STRCQ7RTU9 1775 aa24.47■■□□□ 1.51
SRM-204ENST00000475189 NUP155O75694 1391 aa24.46■■□□□ 1.51
SRM-204ENST00000475189 NLRP1Q9C000 1473 aa24.45■■□□□ 1.51
SRM-204ENST00000475189 E9PCH4 1651 aa24.41■■□□□ 1.5
SRM-204ENST00000475189 RPRD2Q5VT52 1461 aaKnown RBP24.41■■□□□ 1.5
SRM-204ENST00000475189 NOS1P29475 1434 aa24.39■■□□□ 1.5
SRM-204ENST00000475189 SYNMO15061 1565 aa24.38■■□□□ 1.49
SRM-204ENST00000475189 UGGT1Q9NYU2 1555 aa24.38■■□□□ 1.49
SRM-204ENST00000475189 PLA2R1Q13018 1463 aa24.37■■□□□ 1.49
SRM-204ENST00000475189 UBR1Q8IWV7 1749 aa24.35■■□□□ 1.49
SRM-204ENST00000475189 THEMISQ8N1K5 641 aaPredicted RBP24.34■■□□□ 1.49
SRM-204ENST00000475189 PIK3C2BO00750 1634 aa24.33■■□□□ 1.49
SRM-204ENST00000475189 NCKAP5LQ9HCH0 1330 aa24.33■■□□□ 1.48
SRM-204ENST00000475189 IDI1Q13907 227 aa24.32■■□□□ 1.48
SRM-204ENST00000475189 TRIM52Q96A61 297 aa24.32■■□□□ 1.48
SRM-204ENST00000475189 DMRT2Q9Y5R5 561 aa24.31■■□□□ 1.48
SRM-204ENST00000475189 SETD5Q9C0A6 1442 aa24.3■■□□□ 1.48
SRM-204ENST00000475189 PKD2Q13563 968 aa24.29■■□□□ 1.48
SRM-204ENST00000475189 POLR1AO95602 1720 aaPredicted RBP24.29■■□□□ 1.48
SRM-204ENST00000475189 PTPRTO14522 1441 aa24.28■■□□□ 1.48
SRM-204ENST00000475189 SLC52A1Q9NWF4 448 aa24.28■■□□□ 1.48
SRM-204ENST00000475189 KDM5AP29375 1690 aaKnown RBP24.27■■□□□ 1.48
SRM-204ENST00000475189 FBXO41Q8TF61 875 aa24.27■■□□□ 1.48
SRM-204ENST00000475189 SPHKAPQ2M3C7 1700 aa24.25■■□□□ 1.47
SRM-204ENST00000475189 NEURL4Q96JN8 1562 aa24.24■■□□□ 1.47
SRM-204ENST00000475189 ANKLE2Q86XL3 938 aa24.23■■□□□ 1.47
SRM-204ENST00000475189 STAG3Q9UJ98 1225 aa24.23■■□□□ 1.47
SRM-204ENST00000475189 MYO5BQ9ULV0 1848 aa24.23■■□□□ 1.47
SRM-204ENST00000475189 ADGRB3O60242 1522 aa24.22■■□□□ 1.47
SRM-204ENST00000475189 SLC4A1APQ9BWU0 796 aaKnown RBP24.22■■□□□ 1.47
SRM-204ENST00000475189 SLIT1O75093 1534 aa24.21■■□□□ 1.47
SRM-204ENST00000475189 ARHGAP23Q9P227 1491 aa24.21■■□□□ 1.47
SRM-204ENST00000475189 RAB3GAP2Q9H2M9 1393 aa24.21■■□□□ 1.47
SRM-204ENST00000475189 ACIN1Q9UKV3 1341 aaKnown RBP24.19■■□□□ 1.46
SRM-204ENST00000475189 TMEM131LA2VDJ0 1609 aa24.19■■□□□ 1.46
SRM-204ENST00000475189 MED14O60244 1454 aa24.18■■□□□ 1.46
SRM-204ENST00000475189 TMEM2Q9UHN6 1383 aa24.17■■□□□ 1.46
SRM-204ENST00000475189 LTKP29376 864 aa24.16■■□□□ 1.46
SRM-204ENST00000475189 MPHOSPH9Q99550 1183 aa24.16■■□□□ 1.46
SRM-204ENST00000475189 TRPM2O94759 1503 aa24.15■■□□□ 1.46
SRM-204ENST00000475189 SCAF11Q99590 1463 aaKnown RBP24.14■■□□□ 1.46
SRM-204ENST00000475189 NPHP4O75161 1426 aaPredicted RBP24.14■■□□□ 1.45
SRM-204ENST00000475189 TXNDC2Q86VQ3 553 aa24.14■■□□□ 1.45
SRM-204ENST00000475189 IQGAP1P46940 1657 aa24.13■■□□□ 1.45
SRM-204ENST00000475189 CLTCL1P53675 1640 aa24.13■■□□□ 1.45
SRM-204ENST00000475189 CHGAP10645 457 aaKnown RBP24.12■■□□□ 1.45
SRM-204ENST00000475189 EID1Q9Y6B2 187 aa24.12■■□□□ 1.45
SRM-204ENST00000475189 HRCP23327 699 aa24.11■■□□□ 1.45
SRM-204ENST00000475189 FOXD1Q16676 465 aa24.11■■□□□ 1.45
SRM-204ENST00000475189 KIF1BO60333 1816 aa24.08■■□□□ 1.45
SRM-204ENST00000475189 ZFYVE9O95405 1425 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms