RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 TSPY4P0CV99 314 aa14.91□□□□□ -0.02
C9orf3-214ENST00000473778 TSPY10P0CW01 314 aa14.91□□□□□ -0.02
C9orf3-214ENST00000473778 DCAF11Q8TEB1 546 aa14.91□□□□□ -0.02
C9orf3-214ENST00000473778 SMG6Q86US8 1419 aaKnown RBP14.91□□□□□ -0.02
C9orf3-214ENST00000473778 PNISRQ8TF01 805 aaKnown RBP14.91□□□□□ -0.02
C9orf3-214ENST00000473778 ARID4BQ4LE39 1312 aaPredicted RBP14.9□□□□□ -0.02
C9orf3-214ENST00000473778 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
C9orf3-214ENST00000473778 E9PCH4 1651 aa14.9□□□□□ -0.02
C9orf3-214ENST00000473778 PREX2Q70Z35 1606 aa14.9□□□□□ -0.02
C9orf3-214ENST00000473778 ERICH6Q7L0X2 663 aa14.9□□□□□ -0.02
C9orf3-214ENST00000473778 FANCIQ9NVI1 1328 aa14.89□□□□□ -0.03
C9orf3-214ENST00000473778 CCDC141Q6ZP82 1450 aa14.88□□□□□ -0.03
C9orf3-214ENST00000473778 TTC37Q6PGP7 1564 aa14.87□□□□□ -0.03
C9orf3-214ENST00000473778 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
C9orf3-214ENST00000473778 NUDCQ9Y266 331 aa14.87□□□□□ -0.03
C9orf3-214ENST00000473778 RNF123Q5XPI4 1314 aa14.86□□□□□ -0.03
C9orf3-214ENST00000473778 TRPM1Q7Z4N2 1603 aa14.86□□□□□ -0.03
C9orf3-214ENST00000473778 ROCK2O75116 1388 aaKnown RBP14.86□□□□□ -0.03
C9orf3-214ENST00000473778 PLA2R1Q13018 1463 aa14.86□□□□□ -0.03
C9orf3-214ENST00000473778 LRPPRCP42704 1394 aaKnown RBP14.84□□□□□ -0.03
C9orf3-214ENST00000473778 NBPF1Q3BBV0 1214 aa14.84□□□□□ -0.03
C9orf3-214ENST00000473778 TMC1Q8TDI8 760 aa14.84□□□□□ -0.03
C9orf3-214ENST00000473778 PRAG1Q86YV5 1406 aa14.84□□□□□ -0.03
C9orf3-214ENST00000473778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.04
C9orf3-214ENST00000473778 CHD1O14646 1710 aa14.82□□□□□ -0.04
C9orf3-214ENST00000473778 RGL3Q3MIN7 710 aa14.82□□□□□ -0.04
C9orf3-214ENST00000473778 UNC13BO14795 1591 aa14.81□□□□□ -0.04
C9orf3-214ENST00000473778 ERCC6L2Q5T890 1561 aa14.81□□□□□ -0.04
C9orf3-214ENST00000473778 A2MP01023 1474 aa14.81□□□□□ -0.04
C9orf3-214ENST00000473778 CCDC144AA2RUR9 1427 aa14.8□□□□□ -0.04
C9orf3-214ENST00000473778 MYO5CQ9NQX4 1742 aa14.8□□□□□ -0.04
C9orf3-214ENST00000473778 MYBBP1AQ9BQG0 1328 aaKnown RBP14.8□□□□□ -0.04
C9orf3-214ENST00000473778 ARHGAP5Q13017 1502 aa14.79□□□□□ -0.04
C9orf3-214ENST00000473778 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
C9orf3-214ENST00000473778 BRD4O60885 1362 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-214ENST00000473778 PLEKHH2Q8IVE3 1493 aa14.78□□□□□ -0.04
C9orf3-214ENST00000473778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.04
C9orf3-214ENST00000473778 MAST1Q9Y2H9 1570 aa14.78□□□□□ -0.04
C9orf3-214ENST00000473778 PER1O15534 1290 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-214ENST00000473778 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
C9orf3-214ENST00000473778 PARD3Q8TEW0 1356 aa14.76□□□□□ -0.05
C9orf3-214ENST00000473778 DISP3Q9P2K9 1392 aa14.76□□□□□ -0.05
C9orf3-214ENST00000473778 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
C9orf3-214ENST00000473778 IQGAP3Q86VI3 1631 aa14.76□□□□□ -0.05
C9orf3-214ENST00000473778 GPRASP1Q5JY77 1395 aa14.76□□□□□ -0.05
C9orf3-214ENST00000473778 RALBP1Q15311 655 aa14.76□□□□□ -0.05
C9orf3-214ENST00000473778 TESK2Q96S53 571 aa14.76□□□□□ -0.05
C9orf3-214ENST00000473778 PRDM15P57071 1507 aaPredicted RBP14.75□□□□□ -0.05
C9orf3-214ENST00000473778 PLXNC1O60486 1568 aa14.75□□□□□ -0.05
C9orf3-214ENST00000473778 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
C9orf3-214ENST00000473778 SALL2Q9Y467 1007 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-214ENST00000473778 KTN1Q86UP2 1357 aaKnown RBP14.74□□□□□ -0.05
C9orf3-214ENST00000473778 COL17A1Q9UMD9 1497 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-214ENST00000473778 CCDC136Q96JN2 1154 aa14.73□□□□□ -0.05
C9orf3-214ENST00000473778 LAMC1P11047 1609 aa14.72□□□□□ -0.05
C9orf3-214ENST00000473778 MAGI2Q86UL8 1455 aa14.72□□□□□ -0.05
C9orf3-214ENST00000473778 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
C9orf3-214ENST00000473778 NLRP13Q86W25 1043 aa14.71□□□□□ -0.05
C9orf3-214ENST00000473778 CC2D1BQ5T0F9 858 aaKnown RBP14.7□□□□□ -0.06
C9orf3-214ENST00000473778 CDCA7LQ96GN5 454 aa14.69□□□□□ -0.06
C9orf3-214ENST00000473778 ATP10AO60312 1499 aa14.69□□□□□ -0.06
C9orf3-214ENST00000473778 DUOX2Q9NRD8 1548 aa14.69□□□□□ -0.06
C9orf3-214ENST00000473778 RRP1P56182 461 aaKnown RBP14.68□□□□□ -0.06
C9orf3-214ENST00000473778 ERBINQ96RT1 1412 aa14.67□□□□□ -0.06
C9orf3-214ENST00000473778 PANK3Q9H999 370 aa14.67□□□□□ -0.06
C9orf3-214ENST00000473778 RNF17Q9BXT8 1623 aaKnown RBP14.67□□□□□ -0.06
C9orf3-214ENST00000473778 EXOC6Q8TAG9 804 aa14.67□□□□□ -0.06
C9orf3-214ENST00000473778 TRAPPC8Q9Y2L5 1435 aa14.66□□□□□ -0.06
C9orf3-214ENST00000473778 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-214ENST00000473778 ZCCHC11Q5TAX3 1644 aaKnown RBP14.66□□□□□ -0.06
C9orf3-214ENST00000473778 EIF2AK4Q9P2K8 1649 aaKnown RBP14.66□□□□□ -0.06
C9orf3-214ENST00000473778 RCAN3Q9UKA8 241 aa14.65□□□□□ -0.06
C9orf3-214ENST00000473778 ABCC1P33527 1531 aa14.65□□□□□ -0.06
C9orf3-214ENST00000473778 PLCH2O75038 1416 aa14.65□□□□□ -0.06
C9orf3-214ENST00000473778 POTEDQ86YR6 584 aa14.64□□□□□ -0.07
C9orf3-214ENST00000473778 BLMP54132 1417 aaPredicted RBP14.63□□□□□ -0.07
C9orf3-214ENST00000473778 MADDQ8WXG6 1647 aa14.63□□□□□ -0.07
C9orf3-214ENST00000473778 WDR7Q9Y4E6 1490 aa14.62□□□□□ -0.07
C9orf3-214ENST00000473778 IQGAP1P46940 1657 aa14.61□□□□□ -0.07
C9orf3-214ENST00000473778 PLIN1O60240 522 aa14.6□□□□□ -0.07
C9orf3-214ENST00000473778 TMF1P82094 1093 aa14.6□□□□□ -0.07
C9orf3-214ENST00000473778 WASHC2CQ9Y4E1 1318 aa14.6□□□□□ -0.07
C9orf3-214ENST00000473778 AFAP1Q8N556 730 aa14.6□□□□□ -0.07
C9orf3-214ENST00000473778 NOP58Q9Y2X3 529 aaKnown RBP14.59□□□□□ -0.07
C9orf3-214ENST00000473778 PDE3BQ13370 1112 aa14.58□□□□□ -0.08
C9orf3-214ENST00000473778 EFCAB2Q5VUJ9 269 aa14.58□□□□□ -0.08
C9orf3-214ENST00000473778 SPHKAPQ2M3C7 1700 aa14.58□□□□□ -0.08
C9orf3-214ENST00000473778 CLTCL1P53675 1640 aa14.58□□□□□ -0.08
C9orf3-214ENST00000473778 ZFYVE16Q7Z3T8 1539 aa14.58□□□□□ -0.08
C9orf3-214ENST00000473778 CEP152O94986 1710 aa14.57□□□□□ -0.08
C9orf3-214ENST00000473778 ADAMTS8Q9UP79 889 aa14.57□□□□□ -0.08
C9orf3-214ENST00000473778 TRPM2O94759 1503 aa14.56□□□□□ -0.08
C9orf3-214ENST00000473778 SKAP1Q86WV1 359 aa14.56□□□□□ -0.08
C9orf3-214ENST00000473778 ZMYM4Q5VZL5 1548 aa14.56□□□□□ -0.08
C9orf3-214ENST00000473778 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
C9orf3-214ENST00000473778 MYOM1P52179 1685 aa14.55□□□□□ -0.08
C9orf3-214ENST00000473778 DEPDC5O75140 1603 aa14.54□□□□□ -0.08
C9orf3-214ENST00000473778 AMER1Q5JTC6 1135 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-214ENST00000473778 MYT1LQ9UL68 1186 aa14.54□□□□□ -0.08
C9orf3-214ENST00000473778 INSRP06213 1382 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms