RNA–Protein interactions for RNA: ENST00000472617.5

C1orf35-204, Transcript of chromosome 1 open reading frame 35, humanhuman

TSL 2

Gene C1orf35, Length 3,554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-204ENST00000472617 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
C1orf35-204ENST00000472617 KIF3BO15066 747 aa18.9■□□□□ 0.62
C1orf35-204ENST00000472617 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
C1orf35-204ENST00000472617 VSIG10Q8N0Z9 540 aa18.89■□□□□ 0.61
C1orf35-204ENST00000472617 ITSN2Q9NZM3 1697 aa18.88■□□□□ 0.61
C1orf35-204ENST00000472617 DNMT1P26358 1616 aaKnown RBP18.87■□□□□ 0.61
C1orf35-204ENST00000472617 DENND4BO75064 1496 aaPredicted RBP18.86■□□□□ 0.61
C1orf35-204ENST00000472617 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
C1orf35-204ENST00000472617 GGT6Q6P531 493 aa18.85■□□□□ 0.61
C1orf35-204ENST00000472617 CCDC141Q6ZP82 1450 aa18.85■□□□□ 0.61
C1orf35-204ENST00000472617 KIF7Q2M1P5 1343 aa18.85■□□□□ 0.61
C1orf35-204ENST00000472617 KIAA1107Q9UPP5 1409 aa18.84■□□□□ 0.61
C1orf35-204ENST00000472617 ST20-MTHFSA0A0A6YYL1 179 aa18.83■□□□□ 0.61
C1orf35-204ENST00000472617 UBE2Q2Q8WVN8 375 aa18.82■□□□□ 0.6
C1orf35-204ENST00000472617 NAP1L5Q96NT1 182 aaPredicted RBP18.82■□□□□ 0.6
C1orf35-204ENST00000472617 ABCC2Q92887 1545 aa18.82■□□□□ 0.6
C1orf35-204ENST00000472617 FRAT1Q92837 279 aaPredicted RBP18.81■□□□□ 0.6
C1orf35-204ENST00000472617 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
C1orf35-204ENST00000472617 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
C1orf35-204ENST00000472617 PLIN1O60240 522 aa18.8■□□□□ 0.6
C1orf35-204ENST00000472617 EXOC6Q8TAG9 804 aa18.8■□□□□ 0.6
C1orf35-204ENST00000472617 SYCP2Q9BX26 1530 aa18.8■□□□□ 0.6
C1orf35-204ENST00000472617 PKNOX2Q96KN3 472 aa18.8■□□□□ 0.6
C1orf35-204ENST00000472617 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
C1orf35-204ENST00000472617 RGS3P49796 1198 aa18.79■□□□□ 0.6
C1orf35-204ENST00000472617 USP47Q96K76 1375 aa18.79■□□□□ 0.6
C1orf35-204ENST00000472617 PDE4AP27815 886 aa18.78■□□□□ 0.6
C1orf35-204ENST00000472617 GSE1Q14687 1217 aa18.78■□□□□ 0.6
C1orf35-204ENST00000472617 CNTLNQ9NXG0 1405 aa18.77■□□□□ 0.6
C1orf35-204ENST00000472617 RPRD2Q5VT52 1461 aaKnown RBP18.77■□□□□ 0.6
C1orf35-204ENST00000472617 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
C1orf35-204ENST00000472617 GCC2Q8IWJ2 1684 aa18.77■□□□□ 0.6
C1orf35-204ENST00000472617 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.59
C1orf35-204ENST00000472617 SCAPERQ9BY12 1400 aa18.76■□□□□ 0.59
C1orf35-204ENST00000472617 ROCK2O75116 1388 aaKnown RBP18.75■□□□□ 0.59
C1orf35-204ENST00000472617 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
C1orf35-204ENST00000472617 SPRYD3Q8NCJ5 442 aa18.75■□□□□ 0.59
C1orf35-204ENST00000472617 PZPP20742 1482 aa18.74■□□□□ 0.59
C1orf35-204ENST00000472617 PLEKHH2Q8IVE3 1493 aa18.74■□□□□ 0.59
C1orf35-204ENST00000472617 ARID3AQ99856 593 aa18.74■□□□□ 0.59
C1orf35-204ENST00000472617 KANK1Q14678 1352 aa18.74■□□□□ 0.59
C1orf35-204ENST00000472617 PLCH2O75038 1416 aa18.72■□□□□ 0.59
C1orf35-204ENST00000472617 NFKBIBQ15653 356 aa18.72■□□□□ 0.59
C1orf35-204ENST00000472617 GZF1Q9H116 711 aaPredicted RBP18.72■□□□□ 0.59
C1orf35-204ENST00000472617 CDC42BPAQ5VT25 1732 aa18.72■□□□□ 0.59
C1orf35-204ENST00000472617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.71■□□□□ 0.59
C1orf35-204ENST00000472617 TRAPPC8Q9Y2L5 1435 aa18.7■□□□□ 0.58
C1orf35-204ENST00000472617 SLKQ9H2G2 1235 aaPredicted RBP18.7■□□□□ 0.58
C1orf35-204ENST00000472617 CC2D1BQ5T0F9 858 aaKnown RBP18.69■□□□□ 0.58
C1orf35-204ENST00000472617 TTC37Q6PGP7 1564 aa18.69■□□□□ 0.58
C1orf35-204ENST00000472617 MBD5Q9P267 1494 aa18.69■□□□□ 0.58
C1orf35-204ENST00000472617 RAPGEF3O95398 923 aa18.68■□□□□ 0.58
C1orf35-204ENST00000472617 FRAT2O75474 233 aaPredicted RBP18.68■□□□□ 0.58
C1orf35-204ENST00000472617 GLIPR1L2Q4G1C9 344 aa18.68■□□□□ 0.58
C1orf35-204ENST00000472617 ASXL2Q76L83 1435 aa18.68■□□□□ 0.58
C1orf35-204ENST00000472617 ADGRL2O95490 1459 aa18.68■□□□□ 0.58
C1orf35-204ENST00000472617 KDM5BQ9UGL1 1544 aa18.67■□□□□ 0.58
C1orf35-204ENST00000472617 FANCAO15360 1455 aa18.66■□□□□ 0.58
C1orf35-204ENST00000472617 SAMD9LQ8IVG5 1584 aa18.66■□□□□ 0.58
C1orf35-204ENST00000472617 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
C1orf35-204ENST00000472617 ADCY10Q96PN6 1610 aa18.65■□□□□ 0.58
C1orf35-204ENST00000472617 MLECQ14165 292 aa18.65■□□□□ 0.58
C1orf35-204ENST00000472617 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
C1orf35-204ENST00000472617 SHANK2Q9UPX8 1470 aa18.64■□□□□ 0.57
C1orf35-204ENST00000472617 FAM69CQ0P6D2 419 aa18.63■□□□□ 0.57
C1orf35-204ENST00000472617 ADGRL1O94910 1474 aa18.63■□□□□ 0.57
C1orf35-204ENST00000472617 TEX14Q8IWB6 1497 aa18.63■□□□□ 0.57
C1orf35-204ENST00000472617 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
C1orf35-204ENST00000472617 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
C1orf35-204ENST00000472617 NUTM2DQ5VT03 806 aaPredicted RBP18.62■□□□□ 0.57
C1orf35-204ENST00000472617 ADGBQ8N7X0 1667 aa18.61■□□□□ 0.57
C1orf35-204ENST00000472617 ZCCHC11Q5TAX3 1644 aaKnown RBP18.61■□□□□ 0.57
C1orf35-204ENST00000472617 CD109Q6YHK3 1445 aa18.6■□□□□ 0.57
C1orf35-204ENST00000472617 RCAN3Q9UKA8 241 aa18.6■□□□□ 0.57
C1orf35-204ENST00000472617 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
C1orf35-204ENST00000472617 SHROOM2Q13796 1616 aa18.58■□□□□ 0.57
C1orf35-204ENST00000472617 PREX2Q70Z35 1606 aa18.58■□□□□ 0.56
C1orf35-204ENST00000472617 FAM135AQ9P2D6 1515 aa18.58■□□□□ 0.56
C1orf35-204ENST00000472617 ESF1Q9H501 851 aaKnown RBP18.57■□□□□ 0.56
C1orf35-204ENST00000472617 MYO5CQ9NQX4 1742 aa18.57■□□□□ 0.56
C1orf35-204ENST00000472617 CDC42BPBQ9Y5S2 1711 aa18.57■□□□□ 0.56
C1orf35-204ENST00000472617 A0A0U1RQG5 324 aaPredicted RBP18.56■□□□□ 0.56
C1orf35-204ENST00000472617 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
C1orf35-204ENST00000472617 RRP1P56182 461 aaKnown RBP18.55■□□□□ 0.56
C1orf35-204ENST00000472617 TMF1P82094 1093 aa18.55■□□□□ 0.56
C1orf35-204ENST00000472617 UHRF1BP1LA0JNW5 1464 aa18.55■□□□□ 0.56
C1orf35-204ENST00000472617 ZMYND15Q9H091 742 aa18.54■□□□□ 0.56
C1orf35-204ENST00000472617 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
C1orf35-204ENST00000472617 DDRGK1Q96HY6 314 aa18.54■□□□□ 0.56
C1orf35-204ENST00000472617 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
C1orf35-204ENST00000472617 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
C1orf35-204ENST00000472617 ZBTB7CA1YPR0 619 aa18.53■□□□□ 0.56
C1orf35-204ENST00000472617 CDCA7LQ96GN5 454 aa18.52■□□□□ 0.56
C1orf35-204ENST00000472617 PANK3Q9H999 370 aa18.52■□□□□ 0.55
C1orf35-204ENST00000472617 USP35Q9P2H5 1018 aa18.52■□□□□ 0.55
C1orf35-204ENST00000472617 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
C1orf35-204ENST00000472617 DUOX2Q9NRD8 1548 aa18.5■□□□□ 0.55
C1orf35-204ENST00000472617 HSP90AA2PQ14568 343 aaPredicted RBP18.5■□□□□ 0.55
C1orf35-204ENST00000472617 RSPH6AQ9H0K4 717 aa18.5■□□□□ 0.55
C1orf35-204ENST00000472617 BACH2Q9BYV9 841 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms