RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 MAGI2Q86UL8 1455 aa9.74□□□□□ -0.85
ITGB1-209ENST00000472147 PYGBP11216 843 aa9.74□□□□□ -0.85
ITGB1-209ENST00000472147 EFCAB2Q5VUJ9 269 aa9.74□□□□□ -0.85
ITGB1-209ENST00000472147 KIF21BO75037 1637 aa9.74□□□□□ -0.85
ITGB1-209ENST00000472147 ABCA9Q8IUA7 1624 aa9.74□□□□□ -0.85
ITGB1-209ENST00000472147 RNF25Q96BH1 459 aaPredicted RBP9.73□□□□□ -0.85
ITGB1-209ENST00000472147 CDK11AQ9UQ88 783 aaPredicted RBP9.72□□□□□ -0.85
ITGB1-209ENST00000472147 ILDR2Q71H61 639 aa9.71□□□□□ -0.86
ITGB1-209ENST00000472147 YEATS2Q9ULM3 1422 aa9.71□□□□□ -0.86
ITGB1-209ENST00000472147 RANGAP1P46060 587 aaPredicted RBP9.7□□□□□ -0.86
ITGB1-209ENST00000472147 CEBPAP49715 358 aaPredicted RBP9.7□□□□□ -0.86
ITGB1-209ENST00000472147 DISP3Q9P2K9 1392 aa9.7□□□□□ -0.86
ITGB1-209ENST00000472147 FANCAO15360 1455 aa9.7□□□□□ -0.86
ITGB1-209ENST00000472147 BCORL1Q5H9F3 1711 aa9.7□□□□□ -0.86
ITGB1-209ENST00000472147 NUP153P49790 1475 aaKnown RBP9.68□□□□□ -0.86
ITGB1-209ENST00000472147 PLCH2O75038 1416 aa9.68□□□□□ -0.86
ITGB1-209ENST00000472147 SCAPERQ9BY12 1400 aa9.68□□□□□ -0.86
ITGB1-209ENST00000472147 ATN1P54259 1190 aaPredicted RBP9.68□□□□□ -0.86
ITGB1-209ENST00000472147 KIF12Q96FN5 646 aa9.68□□□□□ -0.86
ITGB1-209ENST00000472147 ATP10AO60312 1499 aa9.67□□□□□ -0.86
ITGB1-209ENST00000472147 AFAP1Q8N556 730 aa9.67□□□□□ -0.86
ITGB1-209ENST00000472147 ESF1Q9H501 851 aaKnown RBP9.67□□□□□ -0.86
ITGB1-209ENST00000472147 CTTNBP2Q8WZ74 1663 aa9.67□□□□□ -0.86
ITGB1-209ENST00000472147 MADDQ8WXG6 1647 aa9.67□□□□□ -0.86
ITGB1-209ENST00000472147 RIOK3O14730 519 aaKnown RBP9.66□□□□□ -0.86
ITGB1-209ENST00000472147 POTEFA5A3E0 1075 aa9.65□□□□□ -0.86
ITGB1-209ENST00000472147 MAP3K13O43283 966 aa9.65□□□□□ -0.86
ITGB1-209ENST00000472147 MYT1LQ9UL68 1186 aa9.65□□□□□ -0.86
ITGB1-209ENST00000472147 SGIP1Q9BQI5 828 aa9.64□□□□□ -0.87
ITGB1-209ENST00000472147 ATP1B4Q9UN42 357 aaPredicted RBP9.64□□□□□ -0.87
ITGB1-209ENST00000472147 RAPGEF6Q8TEU7 1601 aa9.64□□□□□ -0.87
ITGB1-209ENST00000472147 FRMPD1Q5SYB0 1578 aa9.63□□□□□ -0.87
ITGB1-209ENST00000472147 PTPRTO14522 1441 aa9.63□□□□□ -0.87
ITGB1-209ENST00000472147 SETD1BQ9UPS6 1966 aaKnown RBP9.63□□□□□ -0.87
ITGB1-209ENST00000472147 EFCAB5A4FU69 1503 aa9.62□□□□□ -0.87
ITGB1-209ENST00000472147 ZFYVE16Q7Z3T8 1539 aa9.62□□□□□ -0.87
ITGB1-209ENST00000472147 EEA1Q15075 1411 aa9.62□□□□□ -0.87
ITGB1-209ENST00000472147 SAMD9Q5K651 1589 aa9.62□□□□□ -0.87
ITGB1-209ENST00000472147 ZMYM4Q5VZL5 1548 aa9.61□□□□□ -0.87
ITGB1-209ENST00000472147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.61□□□□□ -0.873e-9■■□□□ 13.8
ITGB1-209ENST00000472147 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
ITGB1-209ENST00000472147 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
ITGB1-209ENST00000472147 UHRF1BP1Q6BDS2 1440 aa9.61□□□□□ -0.87
ITGB1-209ENST00000472147 ARHGEF40Q8TER5 1519 aa9.61□□□□□ -0.87
ITGB1-209ENST00000472147 C9orf84Q5VXU9 1444 aa9.6□□□□□ -0.87
ITGB1-209ENST00000472147 TRAPPC8Q9Y2L5 1435 aa9.6□□□□□ -0.87
ITGB1-209ENST00000472147 ZNF467Q7Z7K2 595 aaPredicted RBP9.6□□□□□ -0.87
ITGB1-209ENST00000472147 RIMS1Q86UR5 1692 aaKnown RBP9.59□□□□□ -0.87
ITGB1-209ENST00000472147 VGFO15240 615 aaPredicted RBP9.59□□□□□ -0.87
ITGB1-209ENST00000472147 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
ITGB1-209ENST00000472147 MMRN1Q13201 1228 aa9.59□□□□□ -0.87
ITGB1-209ENST00000472147 IFNL1Q8IU54 200 aa9.59□□□□□ -0.87
ITGB1-209ENST00000472147 ARHGEF12Q9NZN5 1544 aa9.59□□□□□ -0.87
ITGB1-209ENST00000472147 RICTORQ6R327 1708 aa9.59□□□□□ -0.87
ITGB1-209ENST00000472147 CFAP74Q9C0B2 1584 aa9.58□□□□□ -0.88
ITGB1-209ENST00000472147 HECW1Q76N89 1606 aa9.57□□□□□ -0.88
ITGB1-209ENST00000472147 TAOK2Q9UL54 1235 aa9.57□□□□□ -0.88
ITGB1-209ENST00000472147 TTC37Q6PGP7 1564 aa9.56□□□□□ -0.88
ITGB1-209ENST00000472147 ZNF518AQ6AHZ1 1483 aa9.56□□□□□ -0.88
ITGB1-209ENST00000472147 UBAP1LF5GYI3 381 aa9.56□□□□□ -0.88
ITGB1-209ENST00000472147 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
ITGB1-209ENST00000472147 BMP2KQ9NSY1 1161 aaPredicted RBP9.56□□□□□ -0.88
ITGB1-209ENST00000472147 FMN1Q68DA7 1419 aa9.56□□□□□ -0.88
ITGB1-209ENST00000472147 IQSEC2Q5JU85 1478 aa9.55□□□□□ -0.88
ITGB1-209ENST00000472147 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.55□□□□□ -0.88
ITGB1-209ENST00000472147 HS6ST3Q8IZP7 471 aa9.55□□□□□ -0.88
ITGB1-209ENST00000472147 ZFP91Q96JP5 570 aaPredicted RBP9.55□□□□□ -0.88
ITGB1-209ENST00000472147 MLH3Q9UHC1 1453 aa9.54□□□□□ -0.88
ITGB1-209ENST00000472147 ZMYM3Q14202 1370 aa9.54□□□□□ -0.88
ITGB1-209ENST00000472147 ST18O60284 1047 aa9.54□□□□□ -0.88
ITGB1-209ENST00000472147 PDAP1Q13442 181 aaKnown RBP9.54□□□□□ -0.88
ITGB1-209ENST00000472147 SPNS2Q8IVW8 549 aa9.54□□□□□ -0.88
ITGB1-209ENST00000472147 CNTLNQ9NXG0 1405 aa9.54□□□□□ -0.88
ITGB1-209ENST00000472147 NCKAP5LQ9HCH0 1330 aa9.53□□□□□ -0.88
ITGB1-209ENST00000472147 CLIP1P30622 1438 aa9.52□□□□□ -0.89
ITGB1-209ENST00000472147 PSEN1P49768 467 aa9.52□□□□□ -0.89
ITGB1-209ENST00000472147 TROQ12816 1431 aaPredicted RBP9.52□□□□□ -0.89
ITGB1-209ENST00000472147 TRPC6Q9Y210 931 aa9.52□□□□□ -0.89
ITGB1-209ENST00000472147 COLQQ9Y215 455 aaPredicted RBP9.52□□□□□ -0.89
ITGB1-209ENST00000472147 TOM1O60784 492 aa9.51□□□□□ -0.89
ITGB1-209ENST00000472147 SEC24BO95487 1268 aa9.51□□□□□ -0.89
ITGB1-209ENST00000472147 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
ITGB1-209ENST00000472147 STRCQ7RTU9 1775 aa9.5□□□□□ -0.89
ITGB1-209ENST00000472147 NPATQ14207 1427 aa9.5□□□□□ -0.89
ITGB1-209ENST00000472147 NCOA1Q15788 1441 aa9.5□□□□□ -0.89
ITGB1-209ENST00000472147 STK25O00506 426 aa9.5□□□□□ -0.89
ITGB1-209ENST00000472147 PREX1Q8TCU6 1659 aa9.5□□□□□ -0.89
ITGB1-209ENST00000472147 AGLP35573 1532 aa9.5□□□□□ -0.89
ITGB1-209ENST00000472147 SIGLEC1Q9BZZ2 1709 aa9.49□□□□□ -0.89
ITGB1-209ENST00000472147 BCL11BQ9C0K0 894 aaPredicted RBP9.49□□□□□ -0.89
ITGB1-209ENST00000472147 CDK13Q14004 1512 aaKnown RBP9.49□□□□□ -0.89
ITGB1-209ENST00000472147 FER1L4A9Z1Z3 1794 aa9.49□□□□□ -0.89
ITGB1-209ENST00000472147 SPAG9O60271 1321 aaKnown RBP9.49□□□□□ -0.89
ITGB1-209ENST00000472147 LTBP4Q8N2S1 1624 aa9.49□□□□□ -0.89
ITGB1-209ENST00000472147 TIE1P35590 1138 aa9.48□□□□□ -0.89
ITGB1-209ENST00000472147 HNRNPMP52272 730 aaKnown RBP eCLIP9.48□□□□□ -0.89
ITGB1-209ENST00000472147 ZNF777Q9ULD5 760 aaPredicted RBP9.48□□□□□ -0.89
ITGB1-209ENST00000472147 ZNF335Q9H4Z2 1342 aaPredicted RBP9.48□□□□□ -0.89
ITGB1-209ENST00000472147 ARHGAP5Q13017 1502 aa9.47□□□□□ -0.89
ITGB1-209ENST00000472147 REREQ9P2R6 1566 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms