RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 DHX29Q7Z478 1369 aaKnown RBP23.43■■□□□ 1.34
CALD1-215ENST00000472096 TSPY4P0CV99 314 aa23.43■■□□□ 1.34
CALD1-215ENST00000472096 TSPY10P0CW01 314 aa23.43■■□□□ 1.34
CALD1-215ENST00000472096 LMTK3Q96Q04 1460 aa23.43■■□□□ 1.34
CALD1-215ENST00000472096 ABCC5O15440 1437 aa23.41■■□□□ 1.34
CALD1-215ENST00000472096 DAPK1P53355 1430 aa23.41■■□□□ 1.34
CALD1-215ENST00000472096 EIF2AK4Q9P2K8 1649 aaKnown RBP23.41■■□□□ 1.34
CALD1-215ENST00000472096 SETD1BQ9UPS6 1966 aaKnown RBP23.38■■□□□ 1.33
CALD1-215ENST00000472096 RNF17Q9BXT8 1623 aaKnown RBP23.38■■□□□ 1.33
CALD1-215ENST00000472096 ESF1Q9H501 851 aaKnown RBP23.37■■□□□ 1.33
CALD1-215ENST00000472096 FAM135AQ9P2D6 1515 aa23.36■■□□□ 1.33
CALD1-215ENST00000472096 CEBPAP49715 358 aaPredicted RBP23.35■■□□□ 1.33
CALD1-215ENST00000472096 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
CALD1-215ENST00000472096 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.32
CALD1-215ENST00000472096 GGT6Q6P531 493 aa23.32■■□□□ 1.32
CALD1-215ENST00000472096 KIF3BO15066 747 aa23.31■■□□□ 1.32
CALD1-215ENST00000472096 MROH1Q8NDA8 1641 aa23.3■■□□□ 1.32
CALD1-215ENST00000472096 ZC3H13Q5T200 1668 aaKnown RBP23.3■■□□□ 1.32
CALD1-215ENST00000472096 KIF15Q9NS87 1388 aa23.29■■□□□ 1.32
CALD1-215ENST00000472096 ZBTB22O15209 634 aa23.28■■□□□ 1.32
CALD1-215ENST00000472096 ADGRL2O95490 1459 aa23.28■■□□□ 1.32
CALD1-215ENST00000472096 ZMYM3Q14202 1370 aa23.27■■□□□ 1.32
CALD1-215ENST00000472096 NPATQ14207 1427 aa23.27■■□□□ 1.32
CALD1-215ENST00000472096 UHRF1BP1Q6BDS2 1440 aa23.26■■□□□ 1.31
CALD1-215ENST00000472096 ERBINQ96RT1 1412 aa23.26■■□□□ 1.31
CALD1-215ENST00000472096 CEP152O94986 1710 aa23.26■■□□□ 1.31
CALD1-215ENST00000472096 FAM50AQ14320 339 aaKnown RBP23.26■■□□□ 1.31
CALD1-215ENST00000472096 MYO3AQ8NEV4 1616 aa23.26■■□□□ 1.31
CALD1-215ENST00000472096 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
CALD1-215ENST00000472096 DEPDC5O75140 1603 aa23.25■■□□□ 1.31
CALD1-215ENST00000472096 ZNF142P52746 1687 aaPredicted RBP23.24■■□□□ 1.31
CALD1-215ENST00000472096 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
CALD1-215ENST00000472096 ANKRD30AQ9BXX3 1397 aa23.23■■□□□ 1.31
CALD1-215ENST00000472096 PTPRKQ15262 1439 aa23.23■■□□□ 1.31
CALD1-215ENST00000472096 ABCC3O15438 1527 aa23.23■■□□□ 1.31
CALD1-215ENST00000472096 NCOA1Q15788 1441 aa23.22■■□□□ 1.31
CALD1-215ENST00000472096 CAMSAP1Q5T5Y3 1602 aa23.2■■□□□ 1.3
CALD1-215ENST00000472096 PZPP20742 1482 aa23.2■■□□□ 1.3
CALD1-215ENST00000472096 HSPA2P54652 639 aa23.2■■□□□ 1.3
CALD1-215ENST00000472096 RRP7BPQ9NSQ0 103 aa23.2■■□□□ 1.3
CALD1-215ENST00000472096 CHIC2Q9UKJ5 165 aa23.2■■□□□ 1.3
CALD1-215ENST00000472096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.16■■□□□ 1.3
CALD1-215ENST00000472096 WASHC2CQ9Y4E1 1318 aa23.16■■□□□ 1.3
CALD1-215ENST00000472096 CEP170BQ9Y4F5 1589 aaPredicted RBP23.16■■□□□ 1.3
CALD1-215ENST00000472096 DCAF8L1A6NGE4 600 aa23.16■■□□□ 1.3
CALD1-215ENST00000472096 STRCQ7RTU9 1775 aa23.16■■□□□ 1.3
CALD1-215ENST00000472096 RRBP1Q9P2E9 1410 aaKnown RBP23.14■■□□□ 1.29
CALD1-215ENST00000472096 VWDEQ8N2E2 1590 aa23.11■■□□□ 1.29
CALD1-215ENST00000472096 CFAP65Q6ZU64 1925 aaKnown RBP23.11■■□□□ 1.29
CALD1-215ENST00000472096 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
CALD1-215ENST00000472096 FOXD4L1Q9NU39 408 aa23.09■■□□□ 1.29
CALD1-215ENST00000472096 ROCK1Q13464 1354 aa23.09■■□□□ 1.29
CALD1-215ENST00000472096 ANKRD50Q9ULJ7 1429 aa23.08■■□□□ 1.29
CALD1-215ENST00000472096 UNC13BO14795 1591 aa23.07■■□□□ 1.28
CALD1-215ENST00000472096 TNRQ92752 1358 aa23.07■■□□□ 1.28
CALD1-215ENST00000472096 LMTK2Q8IWU2 1503 aa23.07■■□□□ 1.28
CALD1-215ENST00000472096 A2ML1A8K2U0 1454 aa23.06■■□□□ 1.28
CALD1-215ENST00000472096 ERVK-7P63135 1459 aa23.06■■□□□ 1.28
CALD1-215ENST00000472096 FBXO31Q5XUX0 539 aaPredicted RBP23.05■■□□□ 1.28
CALD1-215ENST00000472096 KANK1Q14678 1352 aa23.04■■□□□ 1.28
CALD1-215ENST00000472096 SLC4A2P04920 1241 aa23.04■■□□□ 1.28
CALD1-215ENST00000472096 ARHGAP31Q2M1Z3 1444 aa23.03■■□□□ 1.28
CALD1-215ENST00000472096 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
CALD1-215ENST00000472096 NLRP1Q9C000 1473 aa23.02■■□□□ 1.28
CALD1-215ENST00000472096 PLA2R1Q13018 1463 aa23.01■■□□□ 1.27
CALD1-215ENST00000472096 ITGAEP38570 1179 aa23.01■■□□□ 1.27
CALD1-215ENST00000472096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.01■■□□□ 1.271e-11■■■■■ 29.8
CALD1-215ENST00000472096 TET3O43151 1660 aa23■■□□□ 1.27
CALD1-215ENST00000472096 GCC2Q8IWJ2 1684 aa23■■□□□ 1.27
CALD1-215ENST00000472096 POLR1AO95602 1720 aaPredicted RBP23■■□□□ 1.27
CALD1-215ENST00000472096 IQGAP3Q86VI3 1631 aa22.97■■□□□ 1.27
CALD1-215ENST00000472096 UGGT1Q9NYU2 1555 aa22.96■■□□□ 1.27
CALD1-215ENST00000472096 UBR1Q8IWV7 1749 aa22.96■■□□□ 1.27
CALD1-215ENST00000472096 PTPRTO14522 1441 aa22.94■■□□□ 1.26
CALD1-215ENST00000472096 SYNMO15061 1565 aa22.93■■□□□ 1.26
CALD1-215ENST00000472096 PIK3C2BO00750 1634 aa22.91■■□□□ 1.26
CALD1-215ENST00000472096 E9PCH4 1651 aa22.9■■□□□ 1.26
CALD1-215ENST00000472096 NEURL4Q96JN8 1562 aa22.9■■□□□ 1.26
CALD1-215ENST00000472096 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
CALD1-215ENST00000472096 KDM5AP29375 1690 aaKnown RBP22.88■■□□□ 1.25
CALD1-215ENST00000472096 NOS1P29475 1434 aa22.88■■□□□ 1.25
CALD1-215ENST00000472096 NAIPQ13075 1403 aa22.87■■□□□ 1.25
CALD1-215ENST00000472096 PKD2Q13563 968 aa22.86■■□□□ 1.25
CALD1-215ENST00000472096 NCKAP5LQ9HCH0 1330 aa22.85■■□□□ 1.25
CALD1-215ENST00000472096 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
CALD1-215ENST00000472096 THEMISQ8N1K5 641 aaPredicted RBP22.82■■□□□ 1.24
CALD1-215ENST00000472096 NUP155O75694 1391 aa22.81■■□□□ 1.24
CALD1-215ENST00000472096 MYO5BQ9ULV0 1848 aa22.81■■□□□ 1.24
CALD1-215ENST00000472096 ADGRB3O60242 1522 aa22.81■■□□□ 1.24
CALD1-215ENST00000472096 IQGAP1P46940 1657 aa22.81■■□□□ 1.24
CALD1-215ENST00000472096 SLIT1O75093 1534 aa22.79■■□□□ 1.24
CALD1-215ENST00000472096 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
CALD1-215ENST00000472096 LTBP4Q8N2S1 1624 aa22.79■■□□□ 1.24
CALD1-215ENST00000472096 SPHKAPQ2M3C7 1700 aa22.78■■□□□ 1.24
CALD1-215ENST00000472096 MED14O60244 1454 aa22.78■■□□□ 1.24
CALD1-215ENST00000472096 ANKLE2Q86XL3 938 aa22.74■■□□□ 1.23
CALD1-215ENST00000472096 NPHP4O75161 1426 aaPredicted RBP22.74■■□□□ 1.23
CALD1-215ENST00000472096 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
CALD1-215ENST00000472096 IDI1Q13907 227 aa22.73■■□□□ 1.23
CALD1-215ENST00000472096 TMEM131LA2VDJ0 1609 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms