RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 GCC2Q8IWJ2 1684 aa22.97■■□□□ 1.27
COMMD6-208ENST00000471682 GGT6Q6P531 493 aa22.97■■□□□ 1.27
COMMD6-208ENST00000471682 TRIM26Q12899 539 aaPredicted RBP22.96■■□□□ 1.27
COMMD6-208ENST00000471682 DEPDC5O75140 1603 aa22.96■■□□□ 1.27
COMMD6-208ENST00000471682 PRDM15P57071 1507 aaPredicted RBP22.94■■□□□ 1.26
COMMD6-208ENST00000471682 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
COMMD6-208ENST00000471682 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
COMMD6-208ENST00000471682 MADDQ8WXG6 1647 aa22.93■■□□□ 1.26
COMMD6-208ENST00000471682 KDM5DQ9BY66 1539 aa22.93■■□□□ 1.26
COMMD6-208ENST00000471682 MROH1Q8NDA8 1641 aa22.93■■□□□ 1.26
COMMD6-208ENST00000471682 FER1L4A9Z1Z3 1794 aa22.92■■□□□ 1.26
COMMD6-208ENST00000471682 KANK1Q14678 1352 aa22.9■■□□□ 1.26
COMMD6-208ENST00000471682 UNC13BO14795 1591 aa22.89■■□□□ 1.26
COMMD6-208ENST00000471682 WASHC2CQ9Y4E1 1318 aa22.89■■□□□ 1.26
COMMD6-208ENST00000471682 ZC3H13Q5T200 1668 aaKnown RBP22.89■■□□□ 1.25
COMMD6-208ENST00000471682 SETD5Q9C0A6 1442 aa22.89■■□□□ 1.25
COMMD6-208ENST00000471682 VWDEQ8N2E2 1590 aa22.89■■□□□ 1.25
COMMD6-208ENST00000471682 MROH2AA6NES4 1674 aa22.88■■□□□ 1.25
COMMD6-208ENST00000471682 PTPRMP28827 1452 aa22.86■■□□□ 1.25
COMMD6-208ENST00000471682 RIMS1Q86UR5 1692 aaKnown RBP22.86■■□□□ 1.25
COMMD6-208ENST00000471682 ABCC3O15438 1527 aa22.86■■□□□ 1.25
COMMD6-208ENST00000471682 LMTK2Q8IWU2 1503 aa22.86■■□□□ 1.25
COMMD6-208ENST00000471682 HRCP23327 699 aa22.85■■□□□ 1.25
COMMD6-208ENST00000471682 ZMYM3Q14202 1370 aa22.84■■□□□ 1.25
COMMD6-208ENST00000471682 CLTCQ00610 1675 aaKnown RBP22.84■■□□□ 1.25
COMMD6-208ENST00000471682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.83■■□□□ 1.25
COMMD6-208ENST00000471682 NUP155O75694 1391 aa22.81■■□□□ 1.24
COMMD6-208ENST00000471682 ARHGAP31Q2M1Z3 1444 aa22.81■■□□□ 1.24
COMMD6-208ENST00000471682 IQGAP3Q86VI3 1631 aa22.8■■□□□ 1.24
COMMD6-208ENST00000471682 RAB3GAP2Q9H2M9 1393 aa22.78■■□□□ 1.24
COMMD6-208ENST00000471682 PZPP20742 1482 aa22.78■■□□□ 1.24
COMMD6-208ENST00000471682 C3P01024 1663 aa22.77■■□□□ 1.24
COMMD6-208ENST00000471682 CEP152O94986 1710 aa22.77■■□□□ 1.23
COMMD6-208ENST00000471682 NPATQ14207 1427 aa22.76■■□□□ 1.23
COMMD6-208ENST00000471682 CAMSAP1Q5T5Y3 1602 aa22.76■■□□□ 1.23
COMMD6-208ENST00000471682 TET3O43151 1660 aa22.75■■□□□ 1.23
COMMD6-208ENST00000471682 RPRD2Q5VT52 1461 aaKnown RBP22.74■■□□□ 1.23
COMMD6-208ENST00000471682 EFCAB6Q5THR3 1501 aa22.73■■□□□ 1.23
COMMD6-208ENST00000471682 CEBPAP49715 358 aaPredicted RBP22.72■■□□□ 1.23
COMMD6-208ENST00000471682 TRIM52Q96A61 297 aa22.72■■□□□ 1.23
COMMD6-208ENST00000471682 SETD1BQ9UPS6 1966 aaKnown RBP22.72■■□□□ 1.23
COMMD6-208ENST00000471682 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
COMMD6-208ENST00000471682 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
COMMD6-208ENST00000471682 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
COMMD6-208ENST00000471682 ERVK-7P63135 1459 aa22.66■■□□□ 1.22
COMMD6-208ENST00000471682 FBXO31Q5XUX0 539 aaPredicted RBP22.64■■□□□ 1.21
COMMD6-208ENST00000471682 E9PCH4 1651 aa22.64■■□□□ 1.21
COMMD6-208ENST00000471682 NOS1P29475 1434 aa22.64■■□□□ 1.21
COMMD6-208ENST00000471682 TNRQ92752 1358 aa22.63■■□□□ 1.21
COMMD6-208ENST00000471682 MPHOSPH9Q99550 1183 aa22.63■■□□□ 1.21
COMMD6-208ENST00000471682 PREX1Q8TCU6 1659 aa22.62■■□□□ 1.21
COMMD6-208ENST00000471682 PLPPR3Q6T4P5 718 aa22.62■■□□□ 1.21
COMMD6-208ENST00000471682 PKD2Q13563 968 aa22.6■■□□□ 1.21
COMMD6-208ENST00000471682 NLRP1Q9C000 1473 aa22.6■■□□□ 1.21
COMMD6-208ENST00000471682 UHRF1BP1Q6BDS2 1440 aa22.59■■□□□ 1.21
COMMD6-208ENST00000471682 PTPRTO14522 1441 aa22.58■■□□□ 1.21
COMMD6-208ENST00000471682 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
COMMD6-208ENST00000471682 SLC52A1Q9NWF4 448 aa22.58■■□□□ 1.21
COMMD6-208ENST00000471682 CFAP65Q6ZU64 1925 aaKnown RBP22.57■■□□□ 1.2
COMMD6-208ENST00000471682 MYO3AQ8NEV4 1616 aa22.55■■□□□ 1.2
COMMD6-208ENST00000471682 SYNMO15061 1565 aa22.54■■□□□ 1.2
COMMD6-208ENST00000471682 A2ML1A8K2U0 1454 aa22.54■■□□□ 1.2
COMMD6-208ENST00000471682 ZNF142P52746 1687 aaPredicted RBP22.52■■□□□ 1.2
COMMD6-208ENST00000471682 SPHKAPQ2M3C7 1700 aa22.52■■□□□ 1.2
COMMD6-208ENST00000471682 LMTK3Q96Q04 1460 aa22.52■■□□□ 1.2
COMMD6-208ENST00000471682 CEP170BQ9Y4F5 1589 aaPredicted RBP22.51■■□□□ 1.19
COMMD6-208ENST00000471682 TRPM2O94759 1503 aa22.51■■□□□ 1.19
COMMD6-208ENST00000471682 PIK3C2BO00750 1634 aa22.49■■□□□ 1.19
COMMD6-208ENST00000471682 PLA2R1Q13018 1463 aa22.49■■□□□ 1.19
COMMD6-208ENST00000471682 IDI1Q13907 227 aa22.49■■□□□ 1.19
COMMD6-208ENST00000471682 KDM5AP29375 1690 aaKnown RBP22.48■■□□□ 1.19
COMMD6-208ENST00000471682 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
COMMD6-208ENST00000471682 THEMISQ8N1K5 641 aaPredicted RBP22.45■■□□□ 1.18
COMMD6-208ENST00000471682 FOXD1Q16676 465 aa22.44■■□□□ 1.18
COMMD6-208ENST00000471682 ANKRD30BQ9BXX2 1392 aa22.43■■□□□ 1.18
COMMD6-208ENST00000471682 ADGRB3O60242 1522 aa22.41■■□□□ 1.18
COMMD6-208ENST00000471682 CCDC144AA2RUR9 1427 aa22.41■■□□□ 1.18
COMMD6-208ENST00000471682 UBR1Q8IWV7 1749 aa22.41■■□□□ 1.18
COMMD6-208ENST00000471682 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
COMMD6-208ENST00000471682 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
COMMD6-208ENST00000471682 CLTCL1P53675 1640 aa22.39■■□□□ 1.18
COMMD6-208ENST00000471682 TMEM131LA2VDJ0 1609 aa22.38■■□□□ 1.17
COMMD6-208ENST00000471682 NEURL4Q96JN8 1562 aa22.36■■□□□ 1.17
COMMD6-208ENST00000471682 SLIT1O75093 1534 aa22.36■■□□□ 1.17
COMMD6-208ENST00000471682 ARHGAP23Q9P227 1491 aa22.35■■□□□ 1.17
COMMD6-208ENST00000471682 HSPA2P54652 639 aa22.35■■□□□ 1.17
COMMD6-208ENST00000471682 TMEM2Q9UHN6 1383 aa22.35■■□□□ 1.17
COMMD6-208ENST00000471682 KIF1BO60333 1816 aa22.34■■□□□ 1.17
COMMD6-208ENST00000471682 HDGFP51858 240 aaKnown RBP22.33■■□□□ 1.17
COMMD6-208ENST00000471682 CHGAP10645 457 aaKnown RBP22.31■■□□□ 1.16
COMMD6-208ENST00000471682 ANKLE2Q86XL3 938 aa22.31■■□□□ 1.16
COMMD6-208ENST00000471682 SPATA31E1Q6ZUB1 1445 aa22.31■■□□□ 1.16
COMMD6-208ENST00000471682 RPGRIP1LQ68CZ1 1315 aa22.3■■□□□ 1.16
COMMD6-208ENST00000471682 EID1Q9Y6B2 187 aa22.29■■□□□ 1.16
COMMD6-208ENST00000471682 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.28■■□□□ 1.16
COMMD6-208ENST00000471682 ZFYVE9O95405 1425 aa22.28■■□□□ 1.16
COMMD6-208ENST00000471682 MYO5BQ9ULV0 1848 aa22.27■■□□□ 1.16
COMMD6-208ENST00000471682 SCAF11Q99590 1463 aaKnown RBP22.27■■□□□ 1.16
COMMD6-208ENST00000471682 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
COMMD6-208ENST00000471682 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms