RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 NISCHQ9Y2I1 1504 aa36.51■■■■□ 3.44
COMMD6-208ENST00000471682 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
COMMD6-208ENST00000471682 ABCC9O60706 1549 aa31.19■■■□□ 2.58
COMMD6-208ENST00000471682 ZCCHC6Q5VYS8 1495 aaKnown RBP30.49■■■□□ 2.47
COMMD6-208ENST00000471682 MYO15BQ96JP2 1530 aa30.34■■■□□ 2.45
COMMD6-208ENST00000471682 NACADO15069 1562 aa30.33■■■□□ 2.45
COMMD6-208ENST00000471682 DCAF1Q9Y4B6 1507 aa30.31■■■□□ 2.44
COMMD6-208ENST00000471682 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
COMMD6-208ENST00000471682 DCAF8L2P0C7V8 631 aa30.24■■■□□ 2.43
COMMD6-208ENST00000471682 UNC13AQ9UPW8 1703 aa29.48■■■□□ 2.31
COMMD6-208ENST00000471682 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
COMMD6-208ENST00000471682 BICRAQ9NZM4 1560 aa29.28■■■□□ 2.28
COMMD6-208ENST00000471682 PABPN1Q86U42 306 aaKnown RBP eCLIP29.18■■■□□ 2.26
COMMD6-208ENST00000471682 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
COMMD6-208ENST00000471682 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
COMMD6-208ENST00000471682 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
COMMD6-208ENST00000471682 DNAJC5BQ9UF47 199 aa28.31■■■□□ 2.12
COMMD6-208ENST00000471682 BAZ1AQ9NRL2 1556 aaPredicted RBP28.28■■■□□ 2.12
COMMD6-208ENST00000471682 CC2D2AQ9P2K1 1620 aa28.26■■■□□ 2.11
COMMD6-208ENST00000471682 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
COMMD6-208ENST00000471682 MROH2BQ7Z745 1585 aa28.09■■■□□ 2.09
COMMD6-208ENST00000471682 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
COMMD6-208ENST00000471682 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
COMMD6-208ENST00000471682 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
COMMD6-208ENST00000471682 NCAPD3P42695 1498 aa28■■■□□ 2.07
COMMD6-208ENST00000471682 RSF1Q96T23 1441 aaPredicted RBP27.93■■■□□ 2.06
COMMD6-208ENST00000471682 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
COMMD6-208ENST00000471682 BAZ1BQ9UIG0 1483 aaKnown RBP27.78■■■□□ 2.04
COMMD6-208ENST00000471682 WIZO95785 1651 aa27.78■■■□□ 2.04
COMMD6-208ENST00000471682 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
COMMD6-208ENST00000471682 SUPT5HO00267 1087 aaKnown RBP27.38■■□□□ 1.97
COMMD6-208ENST00000471682 CCDC88BA6NC98 1476 aa27.22■■□□□ 1.95
COMMD6-208ENST00000471682 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
COMMD6-208ENST00000471682 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
COMMD6-208ENST00000471682 CFTRP13569 1480 aa27.09■■□□□ 1.93
COMMD6-208ENST00000471682 NESP48681 1621 aa27.08■■□□□ 1.93
COMMD6-208ENST00000471682 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
COMMD6-208ENST00000471682 ERCC6Q03468 1493 aa26.89■■□□□ 1.9
COMMD6-208ENST00000471682 PRDM2Q13029 1718 aa26.87■■□□□ 1.89
COMMD6-208ENST00000471682 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
COMMD6-208ENST00000471682 KIF21AQ7Z4S6 1674 aa26.77■■□□□ 1.88
COMMD6-208ENST00000471682 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
COMMD6-208ENST00000471682 MRC2Q9UBG0 1479 aa26.66■■□□□ 1.86
COMMD6-208ENST00000471682 THOC2Q8NI27 1593 aaKnown RBP26.65■■□□□ 1.86
COMMD6-208ENST00000471682 WDR62O43379 1518 aa26.57■■□□□ 1.84
COMMD6-208ENST00000471682 CUX2O14529 1486 aa26.56■■□□□ 1.84
COMMD6-208ENST00000471682 ABCC8Q09428 1581 aa26.54■■□□□ 1.84
COMMD6-208ENST00000471682 URB2Q14146 1524 aaKnown RBP26.5■■□□□ 1.83
COMMD6-208ENST00000471682 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
COMMD6-208ENST00000471682 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
COMMD6-208ENST00000471682 CUX1P39880 1505 aa26.34■■□□□ 1.81
COMMD6-208ENST00000471682 WRNQ14191 1432 aaPredicted RBP eCLIP26.33■■□□□ 1.81
COMMD6-208ENST00000471682 TOP2BQ02880 1626 aa26.24■■□□□ 1.79
COMMD6-208ENST00000471682 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
COMMD6-208ENST00000471682 BIVM-ERCC5R4GMW8 1640 aa26.22■■□□□ 1.79
COMMD6-208ENST00000471682 IFT140Q96RY7 1462 aa26.22■■□□□ 1.79
COMMD6-208ENST00000471682 FGD5Q6ZNL6 1462 aa26.2■■□□□ 1.78
COMMD6-208ENST00000471682 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
COMMD6-208ENST00000471682 SOGA1O94964 1423 aa26.14■■□□□ 1.77
COMMD6-208ENST00000471682 TARBP1Q13395 1621 aaKnown RBP26.11■■□□□ 1.77
COMMD6-208ENST00000471682 RAD54L2Q9Y4B4 1467 aa26.06■■□□□ 1.76
COMMD6-208ENST00000471682 WDR97A6NE52 1622 aa26.03■■□□□ 1.76
COMMD6-208ENST00000471682 ABCA10Q8WWZ4 1543 aa26.02■■□□□ 1.76
COMMD6-208ENST00000471682 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
COMMD6-208ENST00000471682 TRIM41Q8WV44 630 aa25.93■■□□□ 1.74
COMMD6-208ENST00000471682 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
COMMD6-208ENST00000471682 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
COMMD6-208ENST00000471682 AQRO60306 1485 aaKnown RBP eCLIP25.9■■□□□ 1.74
COMMD6-208ENST00000471682 ABCA5Q8WWZ7 1642 aa25.85■■□□□ 1.73
COMMD6-208ENST00000471682 GAPVD1Q14C86 1478 aa25.84■■□□□ 1.73
COMMD6-208ENST00000471682 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
COMMD6-208ENST00000471682 GRIN2BQ13224 1484 aa25.81■■□□□ 1.72
COMMD6-208ENST00000471682 KIF27Q86VH2 1401 aa25.78■■□□□ 1.72
COMMD6-208ENST00000471682 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
COMMD6-208ENST00000471682 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
COMMD6-208ENST00000471682 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
COMMD6-208ENST00000471682 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
COMMD6-208ENST00000471682 IGF1RP08069 1367 aa25.62■■□□□ 1.69
COMMD6-208ENST00000471682 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
COMMD6-208ENST00000471682 FHAD1B1AJZ9 1412 aa25.58■■□□□ 1.69
COMMD6-208ENST00000471682 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
COMMD6-208ENST00000471682 EEA1Q15075 1411 aa25.56■■□□□ 1.68
COMMD6-208ENST00000471682 RUSC2Q8N2Y8 1516 aa25.54■■□□□ 1.68
COMMD6-208ENST00000471682 CHMP7Q8WUX9 453 aaPredicted RBP25.54■■□□□ 1.68
COMMD6-208ENST00000471682 CUL7Q14999 1698 aa25.53■■□□□ 1.68
COMMD6-208ENST00000471682 OSCARQ8IYS5 282 aa25.5■■□□□ 1.67
COMMD6-208ENST00000471682 CHD1O14646 1710 aa25.49■■□□□ 1.67
COMMD6-208ENST00000471682 FBLN2P98095 1184 aa25.49■■□□□ 1.67
COMMD6-208ENST00000471682 CARMIL1Q5VZK9 1371 aa25.46■■□□□ 1.67
COMMD6-208ENST00000471682 GRIN2AQ12879 1464 aa25.46■■□□□ 1.67
COMMD6-208ENST00000471682 CSRNP3Q8WYN3 585 aa25.42■■□□□ 1.66
COMMD6-208ENST00000471682 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
COMMD6-208ENST00000471682 NUP160Q12769 1436 aa25.37■■□□□ 1.65
COMMD6-208ENST00000471682 RAPGEF2Q9Y4G8 1499 aa25.36■■□□□ 1.65
COMMD6-208ENST00000471682 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
COMMD6-208ENST00000471682 CLASP1Q7Z460 1538 aa25.29■■□□□ 1.64
COMMD6-208ENST00000471682 CEP170Q5SW79 1584 aa25.28■■□□□ 1.64
COMMD6-208ENST00000471682 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
COMMD6-208ENST00000471682 KIAA0586Q9BVV6 1533 aa25.21■■□□□ 1.63
COMMD6-208ENST00000471682 KIF21BO75037 1637 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms