RNA–Protein interactions for RNA: ENST00000470904.5

KPNA1-205, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-205ENST00000470904 ZMYM4Q5VZL5 1548 aa8.6□□□□□ -1.03
KPNA1-205ENST00000470904 DHX29Q7Z478 1369 aaKnown RBP8.59□□□□□ -1.03
KPNA1-205ENST00000470904 MADDQ8WXG6 1647 aa8.58□□□□□ -1.04
KPNA1-205ENST00000470904 NUP155O75694 1391 aa8.57□□□□□ -1.04
KPNA1-205ENST00000470904 NAIPQ13075 1403 aa8.57□□□□□ -1.04
KPNA1-205ENST00000470904 HSPA2P54652 639 aa8.57□□□□□ -1.04
KPNA1-205ENST00000470904 MAGI2Q86UL8 1455 aa8.57□□□□□ -1.04
KPNA1-205ENST00000470904 RIMS1Q86UR5 1692 aaKnown RBP8.57□□□□□ -1.04
KPNA1-205ENST00000470904 RTEL1-TNFRSF6BF6WH68 1400 aa8.56□□□□□ -1.04
KPNA1-205ENST00000470904 CHGAP10645 457 aaKnown RBP8.55□□□□□ -1.04
KPNA1-205ENST00000470904 ZNF326Q5BKZ1 582 aaKnown RBP8.55□□□□□ -1.04
KPNA1-205ENST00000470904 SLC4A1APQ9BWU0 796 aaKnown RBP8.55□□□□□ -1.04
KPNA1-205ENST00000470904 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
KPNA1-205ENST00000470904 SHANK2Q9UPX8 1470 aa8.54□□□□□ -1.04
KPNA1-205ENST00000470904 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
KPNA1-205ENST00000470904 FER1L4A9Z1Z3 1794 aa8.54□□□□□ -1.04
KPNA1-205ENST00000470904 CEP152O94986 1710 aa8.54□□□□□ -1.04
KPNA1-205ENST00000470904 DUOX2Q9NRD8 1548 aa8.54□□□□□ -1.04
KPNA1-205ENST00000470904 BCORL1Q5H9F3 1711 aa8.54□□□□□ -1.04
KPNA1-205ENST00000470904 ZMYM3Q14202 1370 aa8.53□□□□□ -1.04
KPNA1-205ENST00000470904 PLXNC1O60486 1568 aa8.53□□□□□ -1.04
KPNA1-205ENST00000470904 MAST1Q9Y2H9 1570 aa8.53□□□□□ -1.04
KPNA1-205ENST00000470904 PKD2Q13563 968 aa8.52□□□□□ -1.04
KPNA1-205ENST00000470904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.52□□□□□ -1.04
KPNA1-205ENST00000470904 HFM1A2PYH4 1435 aa8.52□□□□□ -1.05
KPNA1-205ENST00000470904 MPHOSPH9Q99550 1183 aa8.52□□□□□ -1.05
KPNA1-205ENST00000470904 ADGRL2O95490 1459 aa8.52□□□□□ -1.05
KPNA1-205ENST00000470904 DIEXFQ68CQ4 756 aaKnown RBP8.51□□□□□ -1.05
KPNA1-205ENST00000470904 PTPRMP28827 1452 aa8.51□□□□□ -1.05
KPNA1-205ENST00000470904 ROCK1Q13464 1354 aa8.51□□□□□ -1.05
KPNA1-205ENST00000470904 CNGB1Q14028 1251 aaPredicted RBP8.5□□□□□ -1.05
KPNA1-205ENST00000470904 KANK1Q14678 1352 aa8.5□□□□□ -1.05
KPNA1-205ENST00000470904 ZNF316A6NFI3 1004 aaPredicted RBP8.5□□□□□ -1.05
KPNA1-205ENST00000470904 ERBINQ96RT1 1412 aa8.5□□□□□ -1.05
KPNA1-205ENST00000470904 MROH1Q8NDA8 1641 aa8.5□□□□□ -1.05
KPNA1-205ENST00000470904 RGL3Q3MIN7 710 aa8.5□□□□□ -1.05
KPNA1-205ENST00000470904 STAG3Q9UJ98 1225 aa8.5□□□□□ -1.05
KPNA1-205ENST00000470904 UGGT1Q9NYU2 1555 aa8.49□□□□□ -1.05
KPNA1-205ENST00000470904 ADAMTSL3P82987 1691 aa8.49□□□□□ -1.05
KPNA1-205ENST00000470904 YTHDC1Q96MU7 727 aaKnown RBP8.48□□□□□ -1.05
KPNA1-205ENST00000470904 GCC2Q8IWJ2 1684 aa8.48□□□□□ -1.05
KPNA1-205ENST00000470904 KDM2AQ9Y2K7 1162 aa8.48□□□□□ -1.05
KPNA1-205ENST00000470904 C3P01024 1663 aa8.48□□□□□ -1.05
KPNA1-205ENST00000470904 NPATQ14207 1427 aa8.48□□□□□ -1.05
KPNA1-205ENST00000470904 ABCC3O15438 1527 aa8.48□□□□□ -1.05
KPNA1-205ENST00000470904 AGLP35573 1532 aa8.47□□□□□ -1.05
KPNA1-205ENST00000470904 TONSLQ96HA7 1378 aa8.47□□□□□ -1.05
KPNA1-205ENST00000470904 FAM135AQ9P2D6 1515 aa8.47□□□□□ -1.05
KPNA1-205ENST00000470904 IDI1Q13907 227 aa8.46□□□□□ -1.05
KPNA1-205ENST00000470904 POLR3GLQ9BT43 218 aa8.46□□□□□ -1.06
KPNA1-205ENST00000470904 KDM5DQ9BY66 1539 aa8.46□□□□□ -1.06
KPNA1-205ENST00000470904 REREQ9P2R6 1566 aa8.45□□□□□ -1.06
KPNA1-205ENST00000470904 BCANQ96GW7 911 aa8.45□□□□□ -1.06
KPNA1-205ENST00000470904 PZPP20742 1482 aa8.45□□□□□ -1.06
KPNA1-205ENST00000470904 PRDM15P57071 1507 aaPredicted RBP8.44□□□□□ -1.06
KPNA1-205ENST00000470904 SETD1BQ9UPS6 1966 aaKnown RBP8.44□□□□□ -1.06
KPNA1-205ENST00000470904 CAMSAP1Q5T5Y3 1602 aa8.44□□□□□ -1.06
KPNA1-205ENST00000470904 RNF17Q9BXT8 1623 aaKnown RBP8.44□□□□□ -1.06
KPNA1-205ENST00000470904 EIF2AK4Q9P2K8 1649 aaKnown RBP8.44□□□□□ -1.06
KPNA1-205ENST00000470904 L3MBTL2Q969R5 705 aa8.44□□□□□ -1.06
KPNA1-205ENST00000470904 E9PCH4 1651 aa8.44□□□□□ -1.06
KPNA1-205ENST00000470904 TNRQ92752 1358 aa8.43□□□□□ -1.06
KPNA1-205ENST00000470904 DEPDC5O75140 1603 aa8.43□□□□□ -1.06
KPNA1-205ENST00000470904 NCKAP5LQ9HCH0 1330 aa8.42□□□□□ -1.06
KPNA1-205ENST00000470904 UNC13BO14795 1591 aa8.42□□□□□ -1.06
KPNA1-205ENST00000470904 DDX10Q13206 875 aaKnown RBP8.42□□□□□ -1.06
KPNA1-205ENST00000470904 MIER1Q8N108 512 aa8.41□□□□□ -1.06
KPNA1-205ENST00000470904 RBM33Q96EV2 1170 aaKnown RBP8.41□□□□□ -1.06
KPNA1-205ENST00000470904 MYO5BQ9ULV0 1848 aa8.41□□□□□ -1.06
KPNA1-205ENST00000470904 EFCAB6Q5THR3 1501 aa8.41□□□□□ -1.06
KPNA1-205ENST00000470904 PPP1R15AO75807 674 aaPredicted RBP8.41□□□□□ -1.06
KPNA1-205ENST00000470904 CNTLNQ9NXG0 1405 aa8.41□□□□□ -1.06
KPNA1-205ENST00000470904 ERVK-7P63135 1459 aa8.4□□□□□ -1.06
KPNA1-205ENST00000470904 IQGAP3Q86VI3 1631 aa8.4□□□□□ -1.06
KPNA1-205ENST00000470904 CLSPNQ9HAW4 1339 aa8.4□□□□□ -1.06
KPNA1-205ENST00000470904 PREX1Q8TCU6 1659 aa8.4□□□□□ -1.06
KPNA1-205ENST00000470904 SLC26A8Q96RN1 970 aa8.4□□□□□ -1.06
KPNA1-205ENST00000470904 UHRF1BP1Q6BDS2 1440 aa8.4□□□□□ -1.06
KPNA1-205ENST00000470904 TET3O43151 1660 aa8.4□□□□□ -1.07
KPNA1-205ENST00000470904 PLA2R1Q13018 1463 aa8.39□□□□□ -1.07
KPNA1-205ENST00000470904 LTKP29376 864 aa8.39□□□□□ -1.07
KPNA1-205ENST00000470904 PPP6R1Q9UPN7 881 aa8.39□□□□□ -1.07
KPNA1-205ENST00000470904 SYNMO15061 1565 aa8.39□□□□□ -1.07
KPNA1-205ENST00000470904 VWDEQ8N2E2 1590 aa8.39□□□□□ -1.07
KPNA1-205ENST00000470904 LMTK3Q96Q04 1460 aa8.38□□□□□ -1.07
KPNA1-205ENST00000470904 TXNDC2Q86VQ3 553 aa8.38□□□□□ -1.07
KPNA1-205ENST00000470904 DCAF11Q8TEB1 546 aa8.38□□□□□ -1.07
KPNA1-205ENST00000470904 CCDC144AA2RUR9 1427 aa8.37□□□□□ -1.07
KPNA1-205ENST00000470904 NBPF8Q3BBV2 869 aa8.37□□□□□ -1.07
KPNA1-205ENST00000470904 PIK3C2BO00750 1634 aa8.37□□□□□ -1.07
KPNA1-205ENST00000470904 MYO3AQ8NEV4 1616 aa8.37□□□□□ -1.07
KPNA1-205ENST00000470904 ZC3H13Q5T200 1668 aaKnown RBP8.37□□□□□ -1.07
KPNA1-205ENST00000470904 SPHKAPQ2M3C7 1700 aa8.36□□□□□ -1.07
KPNA1-205ENST00000470904 CLTCL1P53675 1640 aa8.36□□□□□ -1.07
KPNA1-205ENST00000470904 MROH2AA6NES4 1674 aa8.36□□□□□ -1.07
KPNA1-205ENST00000470904 THEMISQ8N1K5 641 aaPredicted RBP8.35□□□□□ -1.07
KPNA1-205ENST00000470904 CEP170BQ9Y4F5 1589 aaPredicted RBP8.35□□□□□ -1.07
KPNA1-205ENST00000470904 NOS1P29475 1434 aa8.35□□□□□ -1.07
KPNA1-205ENST00000470904 SLC52A1Q9NWF4 448 aa8.35□□□□□ -1.07
KPNA1-205ENST00000470904 SPATA31D1Q6ZQQ2 1576 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms