RNA–Protein interactions for RNA: ENST00000470904.5

KPNA1-205, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-205ENST00000470904 NISCHQ9Y2I1 1504 aa13.46□□□□□ -0.25
KPNA1-205ENST00000470904 CCDC180Q9P1Z9 1646 aa11.76□□□□□ -0.53
KPNA1-205ENST00000470904 ABCC9O60706 1549 aa11.75□□□□□ -0.53
KPNA1-205ENST00000470904 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
KPNA1-205ENST00000470904 ZCCHC6Q5VYS8 1495 aaKnown RBP11.21□□□□□ -0.61
KPNA1-205ENST00000470904 SHROOM4Q9ULL8 1493 aa11.12□□□□□ -0.63
KPNA1-205ENST00000470904 RB1CC1Q8TDY2 1594 aa11.11□□□□□ -0.63
KPNA1-205ENST00000470904 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
KPNA1-205ENST00000470904 NACADO15069 1562 aa11.07□□□□□ -0.64
KPNA1-205ENST00000470904 SCRIBQ14160 1630 aa11.04□□□□□ -0.64
KPNA1-205ENST00000470904 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
KPNA1-205ENST00000470904 DCAF1Q9Y4B6 1507 aa10.95□□□□□ -0.66
KPNA1-205ENST00000470904 MYO15BQ96JP2 1530 aa10.9□□□□□ -0.66
KPNA1-205ENST00000470904 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
KPNA1-205ENST00000470904 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
KPNA1-205ENST00000470904 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
KPNA1-205ENST00000470904 CECR2Q9BXF3 1484 aa10.63□□□□□ -0.71
KPNA1-205ENST00000470904 EIF4G1Q04637 1599 aaKnown RBP10.55□□□□□ -0.72
KPNA1-205ENST00000470904 CC2D2AQ9P2K1 1620 aa10.51□□□□□ -0.73
KPNA1-205ENST00000470904 MROH2BQ7Z745 1585 aa10.48□□□□□ -0.73
KPNA1-205ENST00000470904 SMARCA4P51532 1647 aa10.43□□□□□ -0.74
KPNA1-205ENST00000470904 WIZO95785 1651 aa10.4□□□□□ -0.74
KPNA1-205ENST00000470904 BAZ1AQ9NRL2 1556 aaPredicted RBP10.4□□□□□ -0.74
KPNA1-205ENST00000470904 RSF1Q96T23 1441 aaPredicted RBP10.38□□□□□ -0.75
KPNA1-205ENST00000470904 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
KPNA1-205ENST00000470904 BAZ1BQ9UIG0 1483 aaKnown RBP10.31□□□□□ -0.76
KPNA1-205ENST00000470904 SMARCA2P51531 1590 aa10.27□□□□□ -0.76
KPNA1-205ENST00000470904 NCAPD3P42695 1498 aa10.25□□□□□ -0.77
KPNA1-205ENST00000470904 NESP48681 1621 aa10.21□□□□□ -0.78
KPNA1-205ENST00000470904 PEG3Q9GZU2 1588 aa10.19□□□□□ -0.78
KPNA1-205ENST00000470904 HMGXB3Q12766 1538 aa10.17□□□□□ -0.78
KPNA1-205ENST00000470904 TOP2AP11388 1531 aaKnown RBP10.15□□□□□ -0.78
KPNA1-205ENST00000470904 CCDC88BA6NC98 1476 aa10.13□□□□□ -0.79
KPNA1-205ENST00000470904 ERCC6Q03468 1493 aa10.06□□□□□ -0.8
KPNA1-205ENST00000470904 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
KPNA1-205ENST00000470904 EHMT2Q96KQ7 1210 aa10.02□□□□□ -0.81
KPNA1-205ENST00000470904 KIF21AQ7Z4S6 1674 aa10□□□□□ -0.81
KPNA1-205ENST00000470904 CHIC1Q5VXU3 224 aa9.99□□□□□ -0.81
KPNA1-205ENST00000470904 CFTRP13569 1480 aa9.96□□□□□ -0.81
KPNA1-205ENST00000470904 FANCD2Q9BXW9 1451 aa9.96□□□□□ -0.81
KPNA1-205ENST00000470904 LAMC3Q9Y6N6 1575 aa9.95□□□□□ -0.82
KPNA1-205ENST00000470904 FAM9AQ8IZU1 332 aaPredicted RBP9.94□□□□□ -0.82
KPNA1-205ENST00000470904 PDS5BQ9NTI5 1447 aa9.94□□□□□ -0.82
KPNA1-205ENST00000470904 ABCC8Q09428 1581 aa9.92□□□□□ -0.82
KPNA1-205ENST00000470904 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
KPNA1-205ENST00000470904 URB2Q14146 1524 aaKnown RBP9.86□□□□□ -0.83
KPNA1-205ENST00000470904 TRIM41Q8WV44 630 aa9.85□□□□□ -0.83
KPNA1-205ENST00000470904 LOC105371045A0A1W2PR82 267 aa9.84□□□□□ -0.83
KPNA1-205ENST00000470904 THOC2Q8NI27 1593 aaKnown RBP9.83□□□□□ -0.84
KPNA1-205ENST00000470904 MRC2Q9UBG0 1479 aa9.83□□□□□ -0.84
KPNA1-205ENST00000470904 PRDM2Q13029 1718 aa9.83□□□□□ -0.84
KPNA1-205ENST00000470904 TOPBP1Q92547 1522 aa9.8□□□□□ -0.84
KPNA1-205ENST00000470904 RAD54L2Q9Y4B4 1467 aa9.8□□□□□ -0.84
KPNA1-205ENST00000470904 CUX1P39880 1505 aa9.79□□□□□ -0.84
KPNA1-205ENST00000470904 WRNQ14191 1432 aaPredicted RBP eCLIP9.79□□□□□ -0.84
KPNA1-205ENST00000470904 SYNJ1O43426 1573 aa9.78□□□□□ -0.84
KPNA1-205ENST00000470904 TDRD9Q8NDG6 1382 aaKnown RBP9.77□□□□□ -0.85
KPNA1-205ENST00000470904 FGD5Q6ZNL6 1462 aa9.76□□□□□ -0.85
KPNA1-205ENST00000470904 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
KPNA1-205ENST00000470904 WDR62O43379 1518 aa9.75□□□□□ -0.85
KPNA1-205ENST00000470904 POLA1P09884 1462 aaPredicted RBP9.75□□□□□ -0.85
KPNA1-205ENST00000470904 FBLN2P98095 1184 aa9.74□□□□□ -0.85
KPNA1-205ENST00000470904 CUX2O14529 1486 aa9.74□□□□□ -0.85
KPNA1-205ENST00000470904 AQRO60306 1485 aaKnown RBP eCLIP9.73□□□□□ -0.85
KPNA1-205ENST00000470904 DNMBPQ6XZF7 1577 aa9.73□□□□□ -0.85
KPNA1-205ENST00000470904 SOGA1O94964 1423 aa9.73□□□□□ -0.85
KPNA1-205ENST00000470904 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
KPNA1-205ENST00000470904 RUSC2Q8N2Y8 1516 aa9.66□□□□□ -0.86
KPNA1-205ENST00000470904 TARBP1Q13395 1621 aaKnown RBP9.64□□□□□ -0.87
KPNA1-205ENST00000470904 RANGAP1P46060 587 aaPredicted RBP9.64□□□□□ -0.87
KPNA1-205ENST00000470904 IFT140Q96RY7 1462 aa9.63□□□□□ -0.87
KPNA1-205ENST00000470904 BIVM-ERCC5R4GMW8 1640 aa9.63□□□□□ -0.87
KPNA1-205ENST00000470904 EIF4G3O43432 1585 aaKnown RBP9.63□□□□□ -0.87
KPNA1-205ENST00000470904 GAPVD1Q14C86 1478 aa9.59□□□□□ -0.87
KPNA1-205ENST00000470904 CHMP7Q8WUX9 453 aaPredicted RBP9.59□□□□□ -0.87
KPNA1-205ENST00000470904 TTBK1Q5TCY1 1321 aaPredicted RBP9.58□□□□□ -0.88
KPNA1-205ENST00000470904 SNAPC4Q5SXM2 1469 aa9.58□□□□□ -0.88
KPNA1-205ENST00000470904 ABCA10Q8WWZ4 1543 aa9.57□□□□□ -0.88
KPNA1-205ENST00000470904 PPARGC1BQ86YN6 1023 aaKnown RBP9.57□□□□□ -0.88
KPNA1-205ENST00000470904 WDR97A6NE52 1622 aa9.55□□□□□ -0.88
KPNA1-205ENST00000470904 KIF27Q86VH2 1401 aa9.54□□□□□ -0.88
KPNA1-205ENST00000470904 PBRM1Q86U86 1689 aa9.53□□□□□ -0.88
KPNA1-205ENST00000470904 GRIN2BQ13224 1484 aa9.53□□□□□ -0.88
KPNA1-205ENST00000470904 ABCA5Q8WWZ7 1642 aa9.52□□□□□ -0.89
KPNA1-205ENST00000470904 IGF1RP08069 1367 aa9.52□□□□□ -0.89
KPNA1-205ENST00000470904 CHD1O14646 1710 aa9.51□□□□□ -0.89
KPNA1-205ENST00000470904 UBTFP17480 764 aaKnown RBP9.51□□□□□ -0.89
KPNA1-205ENST00000470904 OSCARQ8IYS5 282 aa9.5□□□□□ -0.89
KPNA1-205ENST00000470904 CSRNP3Q8WYN3 585 aa9.5□□□□□ -0.89
KPNA1-205ENST00000470904 CARMIL1Q5VZK9 1371 aa9.49□□□□□ -0.89
KPNA1-205ENST00000470904 P3H3Q8IVL6 736 aa9.46□□□□□ -0.9
KPNA1-205ENST00000470904 SYNJ2O15056 1496 aa9.44□□□□□ -0.9
KPNA1-205ENST00000470904 MAGI1Q96QZ7 1491 aaPredicted RBP9.44□□□□□ -0.9
KPNA1-205ENST00000470904 RAPGEF2Q9Y4G8 1499 aa9.44□□□□□ -0.9
KPNA1-205ENST00000470904 ADAMTS12P58397 1594 aa9.44□□□□□ -0.9
KPNA1-205ENST00000470904 PCGF6Q9BYE7 350 aa9.44□□□□□ -0.9
KPNA1-205ENST00000470904 FHAD1B1AJZ9 1412 aa9.43□□□□□ -0.9
KPNA1-205ENST00000470904 GRIN2AQ12879 1464 aa9.43□□□□□ -0.9
KPNA1-205ENST00000470904 ERICH3Q5RHP9 1530 aa9.43□□□□□ -0.9
KPNA1-205ENST00000470904 DNAJC5Q9H3Z4 198 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms