RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 ZNF518AQ6AHZ1 1483 aa9.54□□□□□ -0.88
GAPVD1-215ENST00000470056 DENND4BO75064 1496 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-215ENST00000470056 TRAPPC8Q9Y2L5 1435 aa9.54□□□□□ -0.88
GAPVD1-215ENST00000470056 AFAP1Q8N556 730 aa9.54□□□□□ -0.88
GAPVD1-215ENST00000470056 HIRIP3Q9BW71 556 aaPredicted RBP9.53□□□□□ -0.88
GAPVD1-215ENST00000470056 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
GAPVD1-215ENST00000470056 KDM2AQ9Y2K7 1162 aa9.53□□□□□ -0.88
GAPVD1-215ENST00000470056 KIF3BO15066 747 aa9.53□□□□□ -0.88
GAPVD1-215ENST00000470056 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
GAPVD1-215ENST00000470056 DHX29Q7Z478 1369 aaKnown RBP9.52□□□□□ -0.88
GAPVD1-215ENST00000470056 USP47Q96K76 1375 aa9.52□□□□□ -0.88
GAPVD1-215ENST00000470056 UNC13BO14795 1591 aa9.52□□□□□ -0.89
GAPVD1-215ENST00000470056 UHRF1BP1Q6BDS2 1440 aa9.52□□□□□ -0.89
GAPVD1-215ENST00000470056 ATP7AQ04656 1500 aa9.52□□□□□ -0.89
GAPVD1-215ENST00000470056 NEO1Q92859 1461 aa9.51□□□□□ -0.89
GAPVD1-215ENST00000470056 GLIPR1L2Q4G1C9 344 aa9.51□□□□□ -0.89
GAPVD1-215ENST00000470056 POLR3GLQ9BT43 218 aa9.51□□□□□ -0.89
GAPVD1-215ENST00000470056 CCDC7Q96M83 1385 aa9.5□□□□□ -0.89
GAPVD1-215ENST00000470056 RALGAPBQ86X10 1494 aa9.5□□□□□ -0.89
GAPVD1-215ENST00000470056 CNTLNQ9NXG0 1405 aa9.5□□□□□ -0.89
GAPVD1-215ENST00000470056 ZFYVE16Q7Z3T8 1539 aa9.5□□□□□ -0.89
GAPVD1-215ENST00000470056 NBPF8Q3BBV2 869 aa9.5□□□□□ -0.89
GAPVD1-215ENST00000470056 CDCA8Q53HL2 280 aa9.49□□□□□ -0.89
GAPVD1-215ENST00000470056 RGL3Q3MIN7 710 aa9.49□□□□□ -0.89
GAPVD1-215ENST00000470056 ATP10AO60312 1499 aa9.49□□□□□ -0.89
GAPVD1-215ENST00000470056 MAGI2Q86UL8 1455 aa9.49□□□□□ -0.89
GAPVD1-215ENST00000470056 IQGAP3Q86VI3 1631 aa9.48□□□□□ -0.89
GAPVD1-215ENST00000470056 POGZQ7Z3K3 1410 aa9.48□□□□□ -0.89
GAPVD1-215ENST00000470056 EIF3AQ14152 1382 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-215ENST00000470056 CYB5RLQ6IPT4 315 aa9.47□□□□□ -0.89
GAPVD1-215ENST00000470056 WASHC2AQ641Q2 1341 aa9.47□□□□□ -0.89
GAPVD1-215ENST00000470056 EIF2AK4Q9P2K8 1649 aaKnown RBP9.46□□□□□ -0.9
GAPVD1-215ENST00000470056 A2MP01023 1474 aa9.46□□□□□ -0.9
GAPVD1-215ENST00000470056 MLH3Q9UHC1 1453 aa9.45□□□□□ -0.9
GAPVD1-215ENST00000470056 KIF7Q2M1P5 1343 aa9.45□□□□□ -0.9
GAPVD1-215ENST00000470056 TMF1P82094 1093 aa9.44□□□□□ -0.9
GAPVD1-215ENST00000470056 INO80Q9ULG1 1556 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-215ENST00000470056 KTN1Q86UP2 1357 aaKnown RBP9.44□□□□□ -0.9
GAPVD1-215ENST00000470056 WASHC2CQ9Y4E1 1318 aa9.44□□□□□ -0.9
GAPVD1-215ENST00000470056 SCAF1Q9H7N4 1312 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-215ENST00000470056 PRAG1Q86YV5 1406 aa9.43□□□□□ -0.9
GAPVD1-215ENST00000470056 GGT6Q6P531 493 aa9.43□□□□□ -0.9
GAPVD1-215ENST00000470056 FAM69CQ0P6D2 419 aa9.42□□□□□ -0.9
GAPVD1-215ENST00000470056 MRS2Q9HD23 443 aa9.42□□□□□ -0.9
GAPVD1-215ENST00000470056 SPATA31E1Q6ZUB1 1445 aa9.42□□□□□ -0.9
GAPVD1-215ENST00000470056 TRPM2O94759 1503 aa9.42□□□□□ -0.9
GAPVD1-215ENST00000470056 ANP32AP39687 249 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-215ENST00000470056 GPRASP1Q5JY77 1395 aa9.41□□□□□ -0.9
GAPVD1-215ENST00000470056 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
GAPVD1-215ENST00000470056 CHGAP10645 457 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-215ENST00000470056 ESF1Q9H501 851 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-215ENST00000470056 PTPRTO14522 1441 aa9.41□□□□□ -0.9
GAPVD1-215ENST00000470056 RALBP1Q15311 655 aa9.41□□□□□ -0.9
GAPVD1-215ENST00000470056 RPGRIP1LQ68CZ1 1315 aa9.41□□□□□ -0.9
GAPVD1-215ENST00000470056 PRKRIP1Q9H875 184 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-215ENST00000470056 HECW2Q9P2P5 1572 aa9.4□□□□□ -0.9
GAPVD1-215ENST00000470056 TET3O43151 1660 aa9.4□□□□□ -0.9
GAPVD1-215ENST00000470056 PRDM15P57071 1507 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-215ENST00000470056 PPP6R1Q9UPN7 881 aa9.4□□□□□ -0.9
GAPVD1-215ENST00000470056 GLI2P10070 1586 aa9.39□□□□□ -0.91
GAPVD1-215ENST00000470056 LMTK2Q8IWU2 1503 aa9.39□□□□□ -0.91
GAPVD1-215ENST00000470056 PLA2R1Q13018 1463 aa9.39□□□□□ -0.91
GAPVD1-215ENST00000470056 KDM5CP41229 1560 aa9.39□□□□□ -0.91
GAPVD1-215ENST00000470056 HNRNPUQ00839 825 aaKnown RBP eCLIP9.38□□□□□ -0.91
GAPVD1-215ENST00000470056 TMC1Q8TDI8 760 aa9.37□□□□□ -0.91
GAPVD1-215ENST00000470056 DEPDC5O75140 1603 aa9.36□□□□□ -0.91
GAPVD1-215ENST00000470056 RAPGEF3O95398 923 aa9.36□□□□□ -0.91
GAPVD1-215ENST00000470056 SLC52A1Q9NWF4 448 aa9.36□□□□□ -0.91
GAPVD1-215ENST00000470056 VWDEQ8N2E2 1590 aa9.36□□□□□ -0.91
GAPVD1-215ENST00000470056 NEURL4Q96JN8 1562 aa9.36□□□□□ -0.91
GAPVD1-215ENST00000470056 STAG3Q9UJ98 1225 aa9.36□□□□□ -0.91
GAPVD1-215ENST00000470056 VGFO15240 615 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-215ENST00000470056 EFCAB6Q5THR3 1501 aa9.35□□□□□ -0.91
GAPVD1-215ENST00000470056 SCAF11Q99590 1463 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-215ENST00000470056 KNSTRNQ9Y448 316 aa9.34□□□□□ -0.91
GAPVD1-215ENST00000470056 LAMC1P11047 1609 aa9.34□□□□□ -0.91
GAPVD1-215ENST00000470056 MYOM2P54296 1465 aa9.34□□□□□ -0.91
GAPVD1-215ENST00000470056 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
GAPVD1-215ENST00000470056 MYBBP1AQ9BQG0 1328 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-215ENST00000470056 C11orf95C9JLR9 678 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-215ENST00000470056 RNF17Q9BXT8 1623 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-215ENST00000470056 NBPF1Q3BBV0 1214 aa9.33□□□□□ -0.92
GAPVD1-215ENST00000470056 RIMBP3CA6NJZ7 1639 aa9.32□□□□□ -0.92
GAPVD1-215ENST00000470056 RIMBP3BA6NNM3 1639 aa9.32□□□□□ -0.92
GAPVD1-215ENST00000470056 RIMBP3Q9UFD9 1639 aa9.32□□□□□ -0.92
GAPVD1-215ENST00000470056 HDGFP51858 240 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-215ENST00000470056 ARHGAP31Q2M1Z3 1444 aa9.32□□□□□ -0.92
GAPVD1-215ENST00000470056 NLRP13Q86W25 1043 aa9.31□□□□□ -0.92
GAPVD1-215ENST00000470056 E9PCH4 1651 aa9.31□□□□□ -0.92
GAPVD1-215ENST00000470056 KIDINS220Q9ULH0 1771 aa9.31□□□□□ -0.92
GAPVD1-215ENST00000470056 COL17A1Q9UMD9 1497 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-215ENST00000470056 BRD4O60885 1362 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-215ENST00000470056 SPHKAPQ2M3C7 1700 aa9.31□□□□□ -0.92
GAPVD1-215ENST00000470056 CNGB1Q14028 1251 aaPredicted RBP9.3□□□□□ -0.92
GAPVD1-215ENST00000470056 NPATQ14207 1427 aa9.3□□□□□ -0.92
GAPVD1-215ENST00000470056 ABCC3O15438 1527 aa9.3□□□□□ -0.92
GAPVD1-215ENST00000470056 TRPM1Q7Z4N2 1603 aa9.3□□□□□ -0.92
GAPVD1-215ENST00000470056 MAP3K4Q9Y6R4 1608 aa9.29□□□□□ -0.92
GAPVD1-215ENST00000470056 ZBED9Q6R2W3 1325 aa9.29□□□□□ -0.92
GAPVD1-215ENST00000470056 CENPJQ9HC77 1338 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms