RNA–Protein interactions for RNA: ENST00000469663.1

PARP1-206, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3

Gene PARP1, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-206ENST00000469663 SOCS7O14512 581 aa17.46■□□□□ 0.39
PARP1-206ENST00000469663 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.38
PARP1-206ENST00000469663 ZMYM3Q14202 1370 aa17.45■□□□□ 0.38
PARP1-206ENST00000469663 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
PARP1-206ENST00000469663 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
PARP1-206ENST00000469663 ATP7AQ04656 1500 aa17.43■□□□□ 0.38
PARP1-206ENST00000469663 GPATCH8Q9UKJ3 1502 aaKnown RBP17.43■□□□□ 0.38
PARP1-206ENST00000469663 PLEKHH2Q8IVE3 1493 aa17.43■□□□□ 0.38
PARP1-206ENST00000469663 ZNF142P52746 1687 aaPredicted RBP17.42■□□□□ 0.38
PARP1-206ENST00000469663 PLXNC1O60486 1568 aa17.42■□□□□ 0.38
PARP1-206ENST00000469663 KIAA1107Q9UPP5 1409 aa17.42■□□□□ 0.38
PARP1-206ENST00000469663 INO80Q9ULG1 1556 aaPredicted RBP17.41■□□□□ 0.38
PARP1-206ENST00000469663 CLTCQ00610 1675 aaKnown RBP17.41■□□□□ 0.38
PARP1-206ENST00000469663 MYO3AQ8NEV4 1616 aa17.4■□□□□ 0.38
PARP1-206ENST00000469663 PLA2R1Q13018 1463 aa17.4■□□□□ 0.38
PARP1-206ENST00000469663 HNRNPMP52272 730 aaKnown RBP eCLIP17.4■□□□□ 0.38
PARP1-206ENST00000469663 MKRN4PQ13434 485 aaPredicted RBP17.4■□□□□ 0.38
PARP1-206ENST00000469663 AKT1S1Q96B36 256 aa17.4■□□□□ 0.38
PARP1-206ENST00000469663 A2MP01023 1474 aa17.39■□□□□ 0.37
PARP1-206ENST00000469663 PKD2Q13563 968 aa17.38■□□□□ 0.37
PARP1-206ENST00000469663 CFDP1Q9UEE9 299 aaPredicted RBP17.38■□□□□ 0.37
PARP1-206ENST00000469663 CCNB3Q8WWL7 1395 aa17.38■□□□□ 0.37
PARP1-206ENST00000469663 CEP170BQ9Y4F5 1589 aaPredicted RBP17.37■□□□□ 0.37
PARP1-206ENST00000469663 NCKAP5LQ9HCH0 1330 aa17.37■□□□□ 0.37
PARP1-206ENST00000469663 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
PARP1-206ENST00000469663 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
PARP1-206ENST00000469663 ADGBQ8N7X0 1667 aa17.36■□□□□ 0.37
PARP1-206ENST00000469663 ZNF335Q9H4Z2 1342 aaPredicted RBP17.35■□□□□ 0.37
PARP1-206ENST00000469663 GGT6Q6P531 493 aa17.33■□□□□ 0.36
PARP1-206ENST00000469663 MTUS2Q5JR59 1369 aa17.32■□□□□ 0.36
PARP1-206ENST00000469663 SPDYE2BA6NHP3 402 aa17.32■□□□□ 0.36
PARP1-206ENST00000469663 UBAP1LF5GYI3 381 aa17.32■□□□□ 0.36
PARP1-206ENST00000469663 SPDYE6P0CI01 402 aa17.32■□□□□ 0.36
PARP1-206ENST00000469663 SPDYE2Q495Y8 402 aa17.32■□□□□ 0.36
PARP1-206ENST00000469663 A2ML1A8K2U0 1454 aa17.3■□□□□ 0.36
PARP1-206ENST00000469663 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
PARP1-206ENST00000469663 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
PARP1-206ENST00000469663 MBD5Q9P267 1494 aa17.27■□□□□ 0.36
PARP1-206ENST00000469663 DNMT1P26358 1616 aaKnown RBP17.27■□□□□ 0.36
PARP1-206ENST00000469663 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
PARP1-206ENST00000469663 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
PARP1-206ENST00000469663 FAM135AQ9P2D6 1515 aa17.25■□□□□ 0.35
PARP1-206ENST00000469663 DHX29Q7Z478 1369 aaKnown RBP17.25■□□□□ 0.35
PARP1-206ENST00000469663 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
PARP1-206ENST00000469663 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
PARP1-206ENST00000469663 TNRQ92752 1358 aa17.22■□□□□ 0.35
PARP1-206ENST00000469663 CPS1P31327 1500 aa17.21■□□□□ 0.35
PARP1-206ENST00000469663 KDM5DQ9BY66 1539 aa17.21■□□□□ 0.35
PARP1-206ENST00000469663 PZPP20742 1482 aa17.21■□□□□ 0.35
PARP1-206ENST00000469663 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
PARP1-206ENST00000469663 NEURL4Q96JN8 1562 aa17.2■□□□□ 0.34
PARP1-206ENST00000469663 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
PARP1-206ENST00000469663 CCDC141Q6ZP82 1450 aa17.19■□□□□ 0.34
PARP1-206ENST00000469663 KIF3BO15066 747 aa17.19■□□□□ 0.34
PARP1-206ENST00000469663 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
PARP1-206ENST00000469663 TOM1O60784 492 aa17.17■□□□□ 0.34
PARP1-206ENST00000469663 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
PARP1-206ENST00000469663 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
PARP1-206ENST00000469663 CAMSAP2Q08AD1 1489 aa17.16■□□□□ 0.34
PARP1-206ENST00000469663 NLRP1Q9C000 1473 aa17.16■□□□□ 0.34
PARP1-206ENST00000469663 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
PARP1-206ENST00000469663 ANKLE2Q86XL3 938 aa17.15■□□□□ 0.34
PARP1-206ENST00000469663 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
PARP1-206ENST00000469663 MIA2Q96PC5 1412 aa17.14■□□□□ 0.33
PARP1-206ENST00000469663 HSPA1LP34931 641 aa17.14■□□□□ 0.33
PARP1-206ENST00000469663 CHRDL2Q6WN34 429 aa17.14■□□□□ 0.33
PARP1-206ENST00000469663 THEMISQ8N1K5 641 aaPredicted RBP17.14■□□□□ 0.33
PARP1-206ENST00000469663 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
PARP1-206ENST00000469663 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
PARP1-206ENST00000469663 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
PARP1-206ENST00000469663 POTEHQ6S545 545 aa17.13■□□□□ 0.33
PARP1-206ENST00000469663 VWDEQ8N2E2 1590 aa17.13■□□□□ 0.33
PARP1-206ENST00000469663 UGGT1Q9NYU2 1555 aa17.13■□□□□ 0.33
PARP1-206ENST00000469663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.13■□□□□ 0.33
PARP1-206ENST00000469663 MED14O60244 1454 aa17.12■□□□□ 0.33
PARP1-206ENST00000469663 ARHGEF5Q12774 1597 aa17.12■□□□□ 0.33
PARP1-206ENST00000469663 NPHP4O75161 1426 aaPredicted RBP17.11■□□□□ 0.33
PARP1-206ENST00000469663 IQGAP1P46940 1657 aa17.09■□□□□ 0.33
PARP1-206ENST00000469663 ZC3H13Q5T200 1668 aaKnown RBP17.08■□□□□ 0.32
PARP1-206ENST00000469663 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
PARP1-206ENST00000469663 TSPY4P0CV99 314 aa17.08■□□□□ 0.32
PARP1-206ENST00000469663 TSPY10P0CW01 314 aa17.08■□□□□ 0.32
PARP1-206ENST00000469663 SSUH2Q9Y2M2 353 aa17.08■□□□□ 0.32
PARP1-206ENST00000469663 ALKQ9UM73 1620 aa17.05■□□□□ 0.32
PARP1-206ENST00000469663 ABCC3O15438 1527 aa17.05■□□□□ 0.32
PARP1-206ENST00000469663 EIF2AK4Q9P2K8 1649 aaKnown RBP17.04■□□□□ 0.32
PARP1-206ENST00000469663 SYNMO15061 1565 aa17.04■□□□□ 0.32
PARP1-206ENST00000469663 MAST1Q9Y2H9 1570 aa17.04■□□□□ 0.32
PARP1-206ENST00000469663 STRCP1A6NGW2 1772 aa17.02■□□□□ 0.31
PARP1-206ENST00000469663 ERVK-7P63135 1459 aa17.01■□□□□ 0.31
PARP1-206ENST00000469663 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
PARP1-206ENST00000469663 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
PARP1-206ENST00000469663 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
PARP1-206ENST00000469663 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
PARP1-206ENST00000469663 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
PARP1-206ENST00000469663 CEP152O94986 1710 aa16.97■□□□□ 0.31
PARP1-206ENST00000469663 CFAP65Q6ZU64 1925 aaKnown RBP16.96■□□□□ 0.31
PARP1-206ENST00000469663 SCAF11Q99590 1463 aaKnown RBP16.96■□□□□ 0.31
PARP1-206ENST00000469663 DUOX2Q9NRD8 1548 aa16.95■□□□□ 0.3
PARP1-206ENST00000469663 SPDYE1Q8NFV5 336 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms