RNA–Protein interactions for RNA: ENST00000469663.1

PARP1-206, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3

Gene PARP1, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-206ENST00000469663 AEBP2Q6ZN18 517 aaPredicted RBP31.14■■■□□ 2.58
PARP1-206ENST00000469663 CHIC1Q5VXU3 224 aa30.03■■■□□ 2.4
PARP1-206ENST00000469663 NISCHQ9Y2I1 1504 aa27.13■■□□□ 1.93
PARP1-206ENST00000469663 SENP3Q9H4L4 574 aaPredicted RBP26.6■■□□□ 1.85
PARP1-206ENST00000469663 PHF23Q9BUL5 403 aaPredicted RBP26.32■■□□□ 1.8
PARP1-206ENST00000469663 FOXD1Q16676 465 aa24.69■■□□□ 1.54
PARP1-206ENST00000469663 ABCC9O60706 1549 aa24.68■■□□□ 1.54
PARP1-206ENST00000469663 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
PARP1-206ENST00000469663 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
PARP1-206ENST00000469663 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
PARP1-206ENST00000469663 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
PARP1-206ENST00000469663 ADRA2BP18089 450 aa23.35■■□□□ 1.33
PARP1-206ENST00000469663 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
PARP1-206ENST00000469663 NACADO15069 1562 aa23.21■■□□□ 1.31
PARP1-206ENST00000469663 PIAS4Q8N2W9 510 aaPredicted RBP23.19■■□□□ 1.3
PARP1-206ENST00000469663 MSH5O43196 834 aa23.03■■□□□ 1.28
PARP1-206ENST00000469663 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
PARP1-206ENST00000469663 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
PARP1-206ENST00000469663 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
PARP1-206ENST00000469663 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
PARP1-206ENST00000469663 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
PARP1-206ENST00000469663 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
PARP1-206ENST00000469663 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
PARP1-206ENST00000469663 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
PARP1-206ENST00000469663 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
PARP1-206ENST00000469663 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
PARP1-206ENST00000469663 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
PARP1-206ENST00000469663 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
PARP1-206ENST00000469663 POTEDQ86YR6 584 aa21.71■■□□□ 1.07
PARP1-206ENST00000469663 DNAJC5Q9H3Z4 198 aa21.67■■□□□ 1.06
PARP1-206ENST00000469663 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
PARP1-206ENST00000469663 CUX2O14529 1486 aa21.43■■□□□ 1.02
PARP1-206ENST00000469663 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
PARP1-206ENST00000469663 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
PARP1-206ENST00000469663 MAPK8IP2Q13387 824 aaPredicted RBP21.32■■□□□ 1
PARP1-206ENST00000469663 ATAD2BQ9ULI0 1458 aa21.3■■□□□ 1
PARP1-206ENST00000469663 PPP4R3CPQ6ZMV5 832 aa21.27■■□□□ 1
PARP1-206ENST00000469663 SMARCA2P51531 1590 aa21.27■□□□□ 0.99
PARP1-206ENST00000469663 HMGXB3Q12766 1538 aa21.25■□□□□ 0.99
PARP1-206ENST00000469663 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
PARP1-206ENST00000469663 DMRT2Q9Y5R5 561 aa21.13■□□□□ 0.97
PARP1-206ENST00000469663 NESP48681 1621 aa21.12■□□□□ 0.97
PARP1-206ENST00000469663 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
PARP1-206ENST00000469663 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
PARP1-206ENST00000469663 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
PARP1-206ENST00000469663 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
PARP1-206ENST00000469663 LAMC3Q9Y6N6 1575 aa20.99■□□□□ 0.95
PARP1-206ENST00000469663 MROH2BQ7Z745 1585 aa20.88■□□□□ 0.93
PARP1-206ENST00000469663 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
PARP1-206ENST00000469663 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
PARP1-206ENST00000469663 CNKSR2Q8WXI2 1034 aa20.8■□□□□ 0.92
PARP1-206ENST00000469663 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
PARP1-206ENST00000469663 MRC2Q9UBG0 1479 aa20.7■□□□□ 0.9
PARP1-206ENST00000469663 NCBP3Q53F19 620 aaKnown RBP20.66■□□□□ 0.9
PARP1-206ENST00000469663 WDR62O43379 1518 aa20.66■□□□□ 0.9
PARP1-206ENST00000469663 WIZO95785 1651 aa20.61■□□□□ 0.89
PARP1-206ENST00000469663 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
PARP1-206ENST00000469663 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
PARP1-206ENST00000469663 HOXD11P31277 338 aaPredicted RBP20.52■□□□□ 0.88
PARP1-206ENST00000469663 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
PARP1-206ENST00000469663 RNF216Q9NWF9 866 aaPredicted RBP20.51■□□□□ 0.87
PARP1-206ENST00000469663 CFTRP13569 1480 aa20.46■□□□□ 0.87
PARP1-206ENST00000469663 OSCARQ8IYS5 282 aa20.38■□□□□ 0.85
PARP1-206ENST00000469663 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
PARP1-206ENST00000469663 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
PARP1-206ENST00000469663 URB2Q14146 1524 aaKnown RBP20.35■□□□□ 0.85
PARP1-206ENST00000469663 DCAF8L1A6NGE4 600 aa20.29■□□□□ 0.84
PARP1-206ENST00000469663 PRDM2Q13029 1718 aa20.27■□□□□ 0.84
PARP1-206ENST00000469663 NPM3O75607 178 aaKnown RBP20.25■□□□□ 0.83
PARP1-206ENST00000469663 KCNA4P22459 653 aa20.2■□□□□ 0.82
PARP1-206ENST00000469663 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
PARP1-206ENST00000469663 RIMBP3CA6NJZ7 1639 aa20.15■□□□□ 0.82
PARP1-206ENST00000469663 RIMBP3BA6NNM3 1639 aa20.15■□□□□ 0.82
PARP1-206ENST00000469663 RIMBP3Q9UFD9 1639 aa20.15■□□□□ 0.82
PARP1-206ENST00000469663 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
PARP1-206ENST00000469663 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
PARP1-206ENST00000469663 TOPBP1Q92547 1522 aa20.09■□□□□ 0.81
PARP1-206ENST00000469663 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
PARP1-206ENST00000469663 ARHGEF11O15085 1522 aa20.06■□□□□ 0.8
PARP1-206ENST00000469663 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
PARP1-206ENST00000469663 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
PARP1-206ENST00000469663 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
PARP1-206ENST00000469663 CHD1O14646 1710 aa19.93■□□□□ 0.78
PARP1-206ENST00000469663 AQRO60306 1485 aaKnown RBP eCLIP19.91■□□□□ 0.785e-7■■■□□ 16.2
PARP1-206ENST00000469663 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
PARP1-206ENST00000469663 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
PARP1-206ENST00000469663 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
PARP1-206ENST00000469663 FBLN2P98095 1184 aa19.83■□□□□ 0.77
PARP1-206ENST00000469663 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
PARP1-206ENST00000469663 SOGA1O94964 1423 aa19.76■□□□□ 0.75
PARP1-206ENST00000469663 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
PARP1-206ENST00000469663 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
PARP1-206ENST00000469663 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
PARP1-206ENST00000469663 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
PARP1-206ENST00000469663 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
PARP1-206ENST00000469663 CLASP1Q7Z460 1538 aa19.7■□□□□ 0.74
PARP1-206ENST00000469663 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
PARP1-206ENST00000469663 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
PARP1-206ENST00000469663 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
PARP1-206ENST00000469663 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms