RNA–Protein interactions for RNA: ENST00000468318.5

CNIH4-206, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 2

Gene CNIH4, Length 1,525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-206ENST00000468318 KIF3BO15066 747 aa27.72■■■□□ 2.03
CNIH4-206ENST00000468318 DEPDC5O75140 1603 aa27.71■■■□□ 2.03
CNIH4-206ENST00000468318 PTPRMP28827 1452 aa27.71■■■□□ 2.03
CNIH4-206ENST00000468318 ERBINQ96RT1 1412 aa27.71■■■□□ 2.03
CNIH4-206ENST00000468318 GGT6Q6P531 493 aa27.7■■■□□ 2.02
CNIH4-206ENST00000468318 PLPPR3Q6T4P5 718 aa27.67■■■□□ 2.02
CNIH4-206ENST00000468318 ZC3H13Q5T200 1668 aaKnown RBP27.66■■■□□ 2.02
CNIH4-206ENST00000468318 ROCK1Q13464 1354 aa27.66■■■□□ 2.02
CNIH4-206ENST00000468318 AEBP2Q6ZN18 517 aaPredicted RBP27.65■■■□□ 2.02
CNIH4-206ENST00000468318 PRDM15P57071 1507 aaPredicted RBP27.65■■■□□ 2.02
CNIH4-206ENST00000468318 CFAP65Q6ZU64 1925 aaKnown RBP27.64■■■□□ 2.02
CNIH4-206ENST00000468318 KDM5DQ9BY66 1539 aa27.64■■■□□ 2.02
CNIH4-206ENST00000468318 ANKRD50Q9ULJ7 1429 aa27.62■■■□□ 2.01
CNIH4-206ENST00000468318 CAMSAP1Q5T5Y3 1602 aa27.61■■■□□ 2.01
CNIH4-206ENST00000468318 UNC13BO14795 1591 aa27.6■■■□□ 2.01
CNIH4-206ENST00000468318 ESF1Q9H501 851 aaKnown RBP27.6■■■□□ 2.01
CNIH4-206ENST00000468318 ABCC3O15438 1527 aa27.58■■■□□ 2.01
CNIH4-206ENST00000468318 CNTLNQ9NXG0 1405 aa27.57■■■□□ 2
CNIH4-206ENST00000468318 FAM135AQ9P2D6 1515 aa27.56■■■□□ 2
CNIH4-206ENST00000468318 CEBPAP49715 358 aaPredicted RBP27.54■■■□□ 2
CNIH4-206ENST00000468318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.53■■■□□ 2
CNIH4-206ENST00000468318 NAIPQ13075 1403 aa27.53■■■□□ 2
CNIH4-206ENST00000468318 PREX1Q8TCU6 1659 aa27.52■■■□□ 2
CNIH4-206ENST00000468318 VWDEQ8N2E2 1590 aa27.51■■□□□ 1.99
CNIH4-206ENST00000468318 HFM1A2PYH4 1435 aa27.49■■□□□ 1.99
CNIH4-206ENST00000468318 WASHC2CQ9Y4E1 1318 aa27.49■■□□□ 1.99
CNIH4-206ENST00000468318 IQGAP3Q86VI3 1631 aa27.49■■□□□ 1.99
CNIH4-206ENST00000468318 ZMYM3Q14202 1370 aa27.48■■□□□ 1.99
CNIH4-206ENST00000468318 TET3O43151 1660 aa27.46■■□□□ 1.99
CNIH4-206ENST00000468318 SETD1BQ9UPS6 1966 aaKnown RBP27.46■■□□□ 1.99
CNIH4-206ENST00000468318 PPP6R1Q9UPN7 881 aa27.45■■□□□ 1.98
CNIH4-206ENST00000468318 MYO3AQ8NEV4 1616 aa27.45■■□□□ 1.98
CNIH4-206ENST00000468318 KANK1Q14678 1352 aa27.44■■□□□ 1.98
CNIH4-206ENST00000468318 EFCAB6Q5THR3 1501 aa27.42■■□□□ 1.98
CNIH4-206ENST00000468318 PZPP20742 1482 aa27.42■■□□□ 1.98
CNIH4-206ENST00000468318 E9PCH4 1651 aa27.41■■□□□ 1.98
CNIH4-206ENST00000468318 LMTK2Q8IWU2 1503 aa27.41■■□□□ 1.98
CNIH4-206ENST00000468318 ZNF142P52746 1687 aaPredicted RBP27.37■■□□□ 1.97
CNIH4-206ENST00000468318 LMTK3Q96Q04 1460 aa27.35■■□□□ 1.97
CNIH4-206ENST00000468318 SPATA31D1Q6ZQQ2 1576 aa27.34■■□□□ 1.97
CNIH4-206ENST00000468318 NPATQ14207 1427 aa27.34■■□□□ 1.97
CNIH4-206ENST00000468318 NUP155O75694 1391 aa27.34■■□□□ 1.97
CNIH4-206ENST00000468318 ERVK-7P63135 1459 aa27.33■■□□□ 1.97
CNIH4-206ENST00000468318 FBXO31Q5XUX0 539 aaPredicted RBP27.33■■□□□ 1.97
CNIH4-206ENST00000468318 SETD5Q9C0A6 1442 aa27.3■■□□□ 1.96
CNIH4-206ENST00000468318 UHRF1BP1Q6BDS2 1440 aa27.3■■□□□ 1.96
CNIH4-206ENST00000468318 SPHKAPQ2M3C7 1700 aa27.29■■□□□ 1.96
CNIH4-206ENST00000468318 CEP170BQ9Y4F5 1589 aaPredicted RBP27.29■■□□□ 1.96
CNIH4-206ENST00000468318 SYNMO15061 1565 aa27.28■■□□□ 1.96
CNIH4-206ENST00000468318 ARHGAP31Q2M1Z3 1444 aa27.28■■□□□ 1.96
CNIH4-206ENST00000468318 TNRQ92752 1358 aa27.27■■□□□ 1.96
CNIH4-206ENST00000468318 TRIM52Q96A61 297 aa27.26■■□□□ 1.96
CNIH4-206ENST00000468318 MYO5BQ9ULV0 1848 aa27.25■■□□□ 1.95
CNIH4-206ENST00000468318 RAB3GAP2Q9H2M9 1393 aa27.25■■□□□ 1.95
CNIH4-206ENST00000468318 PIK3C2BO00750 1634 aa27.23■■□□□ 1.95
CNIH4-206ENST00000468318 RPRD2Q5VT52 1461 aaKnown RBP27.22■■□□□ 1.95
CNIH4-206ENST00000468318 UBR1Q8IWV7 1749 aa27.21■■□□□ 1.95
CNIH4-206ENST00000468318 HSPA2P54652 639 aa27.19■■□□□ 1.94
CNIH4-206ENST00000468318 UGGT1Q9NYU2 1555 aa27.18■■□□□ 1.94
CNIH4-206ENST00000468318 A2ML1A8K2U0 1454 aa27.17■■□□□ 1.94
CNIH4-206ENST00000468318 NOS1P29475 1434 aa27.16■■□□□ 1.94
CNIH4-206ENST00000468318 NLRP1Q9C000 1473 aa27.16■■□□□ 1.94
CNIH4-206ENST00000468318 STRCQ7RTU9 1775 aa27.16■■□□□ 1.94
CNIH4-206ENST00000468318 POLR1AO95602 1720 aaPredicted RBP27.15■■□□□ 1.94
CNIH4-206ENST00000468318 TRIM26Q12899 539 aaPredicted RBP27.15■■□□□ 1.94
CNIH4-206ENST00000468318 SLC4A1APQ9BWU0 796 aaKnown RBP27.11■■□□□ 1.93
CNIH4-206ENST00000468318 CLTCL1P53675 1640 aa27.1■■□□□ 1.93
CNIH4-206ENST00000468318 KDM5AP29375 1690 aaKnown RBP27.09■■□□□ 1.93
CNIH4-206ENST00000468318 KIF1BO60333 1816 aa27.08■■□□□ 1.93
CNIH4-206ENST00000468318 ADGRB3O60242 1522 aa27.08■■□□□ 1.93
CNIH4-206ENST00000468318 TRPM2O94759 1503 aa27.07■■□□□ 1.92
CNIH4-206ENST00000468318 PKD2Q13563 968 aa27.07■■□□□ 1.92
CNIH4-206ENST00000468318 FOXD1Q16676 465 aa27.05■■□□□ 1.92
CNIH4-206ENST00000468318 TMEM131LA2VDJ0 1609 aa27.04■■□□□ 1.92
CNIH4-206ENST00000468318 MPHOSPH9Q99550 1183 aa27.02■■□□□ 1.92
CNIH4-206ENST00000468318 PTPRTO14522 1441 aa27■■□□□ 1.91
CNIH4-206ENST00000468318 IDI1Q13907 227 aa27■■□□□ 1.91
CNIH4-206ENST00000468318 PLA2R1Q13018 1463 aa26.99■■□□□ 1.91
CNIH4-206ENST00000468318 NEURL4Q96JN8 1562 aa26.97■■□□□ 1.91
CNIH4-206ENST00000468318 STAG3Q9UJ98 1225 aa26.95■■□□□ 1.91
CNIH4-206ENST00000468318 ACIN1Q9UKV3 1341 aaKnown RBP26.94■■□□□ 1.9
CNIH4-206ENST00000468318 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
CNIH4-206ENST00000468318 SLC52A1Q9NWF4 448 aa26.93■■□□□ 1.9
CNIH4-206ENST00000468318 IQGAP1P46940 1657 aa26.92■■□□□ 1.9
CNIH4-206ENST00000468318 NCKAP5LQ9HCH0 1330 aa26.92■■□□□ 1.9
CNIH4-206ENST00000468318 SLIT1O75093 1534 aa26.92■■□□□ 1.9
CNIH4-206ENST00000468318 HRCP23327 699 aa26.91■■□□□ 1.9
CNIH4-206ENST00000468318 THEMISQ8N1K5 641 aaPredicted RBP26.9■■□□□ 1.9
CNIH4-206ENST00000468318 ARHGAP23Q9P227 1491 aa26.89■■□□□ 1.9
CNIH4-206ENST00000468318 PCGF6Q9BYE7 350 aa26.87■■□□□ 1.89
CNIH4-206ENST00000468318 PPLO60437 1756 aa26.85■■□□□ 1.89
CNIH4-206ENST00000468318 SCAF11Q99590 1463 aaKnown RBP26.85■■□□□ 1.89
CNIH4-206ENST00000468318 CCDC144AA2RUR9 1427 aa26.85■■□□□ 1.89
CNIH4-206ENST00000468318 TMEM2Q9UHN6 1383 aa26.85■■□□□ 1.89
CNIH4-206ENST00000468318 IFT172Q9UG01 1749 aa26.84■■□□□ 1.89
CNIH4-206ENST00000468318 RIMS2Q9UQ26 1411 aa26.81■■□□□ 1.88
CNIH4-206ENST00000468318 ZFYVE9O95405 1425 aa26.8■■□□□ 1.88
CNIH4-206ENST00000468318 NEXMIFQ5QGS0 1516 aa26.8■■□□□ 1.88
CNIH4-206ENST00000468318 ANKLE2Q86XL3 938 aa26.8■■□□□ 1.88
CNIH4-206ENST00000468318 NPHP4O75161 1426 aaPredicted RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms