RNA–Protein interactions for RNA: ENST00000468318.5

CNIH4-206, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 2

Gene CNIH4, Length 1,525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-206ENST00000468318 NISCHQ9Y2I1 1504 aa43.93■■■■■ 4.62
CNIH4-206ENST00000468318 CCDC180Q9P1Z9 1646 aa39.08■■■■□ 3.85
CNIH4-206ENST00000468318 ABCC9O60706 1549 aa37.94■■■■□ 3.66
CNIH4-206ENST00000468318 ZCCHC6Q5VYS8 1495 aaKnown RBP36.68■■■■□ 3.46
CNIH4-206ENST00000468318 RB1CC1Q8TDY2 1594 aa36.58■■■■□ 3.45
CNIH4-206ENST00000468318 DCAF8L2P0C7V8 631 aa36.57■■■■□ 3.44
CNIH4-206ENST00000468318 NACADO15069 1562 aa36.53■■■■□ 3.44
CNIH4-206ENST00000468318 MYO15BQ96JP2 1530 aa36.29■■■■□ 3.4
CNIH4-206ENST00000468318 DCAF1Q9Y4B6 1507 aa36.28■■■■□ 3.4
CNIH4-206ENST00000468318 UNC13AQ9UPW8 1703 aa36.06■■■■□ 3.36
CNIH4-206ENST00000468318 SCRIBQ14160 1630 aa35.74■■■■□ 3.31
CNIH4-206ENST00000468318 BICRAQ9NZM4 1560 aa35.51■■■■□ 3.28
CNIH4-206ENST00000468318 PABPN1Q86U42 306 aaKnown RBP eCLIP35.41■■■■□ 3.26
CNIH4-206ENST00000468318 SHROOM4Q9ULL8 1493 aa34.96■■■■□ 3.19
CNIH4-206ENST00000468318 EIF4G1Q04637 1599 aaKnown RBP34.53■■■■□ 3.12
CNIH4-206ENST00000468318 DNAJC5BQ9UF47 199 aa34.46■■■■□ 3.11
CNIH4-206ENST00000468318 CC2D2AQ9P2K1 1620 aa34.37■■■■□ 3.09
CNIH4-206ENST00000468318 CECR2Q9BXF3 1484 aa34.23■■■■□ 3.07
CNIH4-206ENST00000468318 SMARCA4P51532 1647 aa34.14■■■■□ 3.06
CNIH4-206ENST00000468318 BAZ1AQ9NRL2 1556 aaPredicted RBP34.04■■■■□ 3.04
CNIH4-206ENST00000468318 MROH2BQ7Z745 1585 aa33.92■■■■□ 3.02
CNIH4-206ENST00000468318 SMARCA2P51531 1590 aa33.75■■■□□ 2.99
CNIH4-206ENST00000468318 ATAD2BQ9ULI0 1458 aa33.75■■■□□ 2.99
CNIH4-206ENST00000468318 PEG3Q9GZU2 1588 aa33.7■■■□□ 2.99
CNIH4-206ENST00000468318 WIZO95785 1651 aa33.69■■■□□ 2.98
CNIH4-206ENST00000468318 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
CNIH4-206ENST00000468318 HMGXB3Q12766 1538 aa33.59■■■□□ 2.97
CNIH4-206ENST00000468318 BAZ1BQ9UIG0 1483 aaKnown RBP33.54■■■□□ 2.96
CNIH4-206ENST00000468318 RSF1Q96T23 1441 aaPredicted RBP33.53■■■□□ 2.96
CNIH4-206ENST00000468318 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
CNIH4-206ENST00000468318 NESP48681 1621 aa32.93■■■□□ 2.86
CNIH4-206ENST00000468318 SUPT5HO00267 1087 aaKnown RBP32.92■■■□□ 2.86
CNIH4-206ENST00000468318 LAMC3Q9Y6N6 1575 aa32.83■■■□□ 2.85
CNIH4-206ENST00000468318 CCDC88BA6NC98 1476 aa32.78■■■□□ 2.84
CNIH4-206ENST00000468318 KIF21AQ7Z4S6 1674 aa32.72■■■□□ 2.83
CNIH4-206ENST00000468318 PRDM2Q13029 1718 aa32.7■■■□□ 2.82
CNIH4-206ENST00000468318 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
CNIH4-206ENST00000468318 ERCC6Q03468 1493 aa32.64■■■□□ 2.82
CNIH4-206ENST00000468318 CFTRP13569 1480 aa32.56■■■□□ 2.8
CNIH4-206ENST00000468318 PDS5BQ9NTI5 1447 aa32.47■■■□□ 2.79
CNIH4-206ENST00000468318 THOC2Q8NI27 1593 aaKnown RBP32.43■■■□□ 2.78
CNIH4-206ENST00000468318 FANCD2Q9BXW9 1451 aa32.38■■■□□ 2.77
CNIH4-206ENST00000468318 CEP164Q9UPV0 1460 aa32.34■■■□□ 2.77
CNIH4-206ENST00000468318 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
CNIH4-206ENST00000468318 WDR62O43379 1518 aa32.14■■■□□ 2.74
CNIH4-206ENST00000468318 CUX2O14529 1486 aa32.12■■■□□ 2.73
CNIH4-206ENST00000468318 URB2Q14146 1524 aaKnown RBP32.09■■■□□ 2.73
CNIH4-206ENST00000468318 DNMBPQ6XZF7 1577 aa31.94■■■□□ 2.7
CNIH4-206ENST00000468318 TOPBP1Q92547 1522 aa31.92■■■□□ 2.7
CNIH4-206ENST00000468318 ABCC8Q09428 1581 aa31.82■■■□□ 2.69
CNIH4-206ENST00000468318 CUX1P39880 1505 aa31.82■■■□□ 2.68
CNIH4-206ENST00000468318 SYNJ1O43426 1573 aa31.69■■■□□ 2.66
CNIH4-206ENST00000468318 BIVM-ERCC5R4GMW8 1640 aa31.68■■■□□ 2.66
CNIH4-206ENST00000468318 POLA1P09884 1462 aaPredicted RBP31.66■■■□□ 2.66
CNIH4-206ENST00000468318 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
CNIH4-206ENST00000468318 WRNQ14191 1432 aaPredicted RBP eCLIP31.62■■■□□ 2.65
CNIH4-206ENST00000468318 TOP2BQ02880 1626 aa31.62■■■□□ 2.65
CNIH4-206ENST00000468318 TARBP1Q13395 1621 aaKnown RBP31.62■■■□□ 2.65
CNIH4-206ENST00000468318 IFT140Q96RY7 1462 aa31.59■■■□□ 2.65
CNIH4-206ENST00000468318 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
CNIH4-206ENST00000468318 WDR97A6NE52 1622 aa31.54■■■□□ 2.64
CNIH4-206ENST00000468318 ZNF608Q9ULD9 1512 aaPredicted RBP31.52■■■□□ 2.64
CNIH4-206ENST00000468318 EIF4G3O43432 1585 aaKnown RBP31.51■■■□□ 2.64
CNIH4-206ENST00000468318 SOGA1O94964 1423 aa31.46■■■□□ 2.63
CNIH4-206ENST00000468318 PBRM1Q86U86 1689 aa31.33■■■□□ 2.61
CNIH4-206ENST00000468318 AQRO60306 1485 aaKnown RBP eCLIP31.32■■■□□ 2.6
CNIH4-206ENST00000468318 ABCA10Q8WWZ4 1543 aa31.29■■■□□ 2.6
CNIH4-206ENST00000468318 TDRD9Q8NDG6 1382 aaKnown RBP31.28■■■□□ 2.6
CNIH4-206ENST00000468318 ABCA5Q8WWZ7 1642 aa31.28■■■□□ 2.6
CNIH4-206ENST00000468318 CHD1O14646 1710 aa31.18■■■□□ 2.58
CNIH4-206ENST00000468318 GAPVD1Q14C86 1478 aa31.15■■■□□ 2.58
CNIH4-206ENST00000468318 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
CNIH4-206ENST00000468318 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
CNIH4-206ENST00000468318 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
CNIH4-206ENST00000468318 MAGI1Q96QZ7 1491 aaPredicted RBP30.98■■■□□ 2.55
CNIH4-206ENST00000468318 ADAMTS12P58397 1594 aa30.96■■■□□ 2.55
CNIH4-206ENST00000468318 ERICH3Q5RHP9 1530 aa30.94■■■□□ 2.54
CNIH4-206ENST00000468318 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
CNIH4-206ENST00000468318 FBLN2P98095 1184 aa30.87■■■□□ 2.53
CNIH4-206ENST00000468318 SYNJ2O15056 1496 aa30.87■■■□□ 2.53
CNIH4-206ENST00000468318 RUSC2Q8N2Y8 1516 aa30.84■■■□□ 2.53
CNIH4-206ENST00000468318 CUL7Q14999 1698 aa30.82■■■□□ 2.52
CNIH4-206ENST00000468318 CHIC1Q5VXU3 224 aa30.79■■■□□ 2.52
CNIH4-206ENST00000468318 CHMP7Q8WUX9 453 aaPredicted RBP30.76■■■□□ 2.51
CNIH4-206ENST00000468318 FHAD1B1AJZ9 1412 aa30.75■■■□□ 2.51
CNIH4-206ENST00000468318 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
CNIH4-206ENST00000468318 GRIN2AQ12879 1464 aa30.73■■■□□ 2.51
CNIH4-206ENST00000468318 DNAJC5Q9H3Z4 198 aa30.73■■■□□ 2.51
CNIH4-206ENST00000468318 IGF1RP08069 1367 aa30.69■■■□□ 2.5
CNIH4-206ENST00000468318 CEP170Q5SW79 1584 aa30.67■■■□□ 2.5
CNIH4-206ENST00000468318 CLASP1Q7Z460 1538 aa30.64■■■□□ 2.5
CNIH4-206ENST00000468318 CARMIL1Q5VZK9 1371 aa30.55■■■□□ 2.48
CNIH4-206ENST00000468318 NUP160Q12769 1436 aa30.53■■■□□ 2.48
CNIH4-206ENST00000468318 RIMBP3CA6NJZ7 1639 aa30.51■■■□□ 2.47
CNIH4-206ENST00000468318 RIMBP3BA6NNM3 1639 aa30.51■■■□□ 2.47
CNIH4-206ENST00000468318 RIMBP3Q9UFD9 1639 aa30.51■■■□□ 2.47
CNIH4-206ENST00000468318 FAM9AQ8IZU1 332 aaPredicted RBP30.47■■■□□ 2.47
CNIH4-206ENST00000468318 RAPGEF2Q9Y4G8 1499 aa30.45■■■□□ 2.46
CNIH4-206ENST00000468318 EEA1Q15075 1411 aa30.44■■■□□ 2.46
CNIH4-206ENST00000468318 ARHGEF11O15085 1522 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms