RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
HDAC3-203ENST00000467533 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
HDAC3-203ENST00000467533 RGS17Q9UGC6 210 aaPredicted RBP17.05■□□□□ 0.32
HDAC3-203ENST00000467533 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
HDAC3-203ENST00000467533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.04■□□□□ 0.32
HDAC3-203ENST00000467533 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
HDAC3-203ENST00000467533 PLEKHH2Q8IVE3 1493 aa17.04■□□□□ 0.32
HDAC3-203ENST00000467533 LRRC7Q96NW7 1537 aa17.03■□□□□ 0.32
HDAC3-203ENST00000467533 SETD1AO15047 1707 aaKnown RBP17.03■□□□□ 0.32
HDAC3-203ENST00000467533 MED14O60244 1454 aa17.02■□□□□ 0.32
HDAC3-203ENST00000467533 UGGT1Q9NYU2 1555 aa17.02■□□□□ 0.31
HDAC3-203ENST00000467533 GPATCH8Q9UKJ3 1502 aaKnown RBP17.01■□□□□ 0.31
HDAC3-203ENST00000467533 PZPP20742 1482 aa17.01■□□□□ 0.31
HDAC3-203ENST00000467533 KDM5DQ9BY66 1539 aa17.01■□□□□ 0.31
HDAC3-203ENST00000467533 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
HDAC3-203ENST00000467533 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
HDAC3-203ENST00000467533 FAM135AQ9P2D6 1515 aa17■□□□□ 0.31
HDAC3-203ENST00000467533 FBXO31Q5XUX0 539 aaPredicted RBP16.98■□□□□ 0.31
HDAC3-203ENST00000467533 NLRP1Q9C000 1473 aa16.98■□□□□ 0.31
HDAC3-203ENST00000467533 THEMISQ8N1K5 641 aaPredicted RBP16.97■□□□□ 0.31
HDAC3-203ENST00000467533 POTEAQ6S8J7 498 aa16.95■□□□□ 0.3
HDAC3-203ENST00000467533 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
HDAC3-203ENST00000467533 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
HDAC3-203ENST00000467533 XIRP1Q702N8 1843 aaKnown RBP16.93■□□□□ 0.3
HDAC3-203ENST00000467533 FYCO1Q9BQS8 1478 aa16.93■□□□□ 0.3
HDAC3-203ENST00000467533 MIA2Q96PC5 1412 aa16.92■□□□□ 0.3
HDAC3-203ENST00000467533 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
HDAC3-203ENST00000467533 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.3
HDAC3-203ENST00000467533 KIF3BO15066 747 aa16.89■□□□□ 0.29
HDAC3-203ENST00000467533 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
HDAC3-203ENST00000467533 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
HDAC3-203ENST00000467533 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
HDAC3-203ENST00000467533 TIAM1Q13009 1591 aa16.85■□□□□ 0.29
HDAC3-203ENST00000467533 MBD5Q9P267 1494 aa16.85■□□□□ 0.29
HDAC3-203ENST00000467533 UBR1Q8IWV7 1749 aa16.84■□□□□ 0.29
HDAC3-203ENST00000467533 FAM135BQ49AJ0 1406 aa16.84■□□□□ 0.29
HDAC3-203ENST00000467533 SCAF11Q99590 1463 aaKnown RBP16.83■□□□□ 0.28
HDAC3-203ENST00000467533 ZNF644Q9H582 1327 aaPredicted RBP16.82■□□□□ 0.28
HDAC3-203ENST00000467533 CCDC141Q6ZP82 1450 aa16.8■□□□□ 0.28
HDAC3-203ENST00000467533 MTUS2Q5JR59 1369 aa16.8■□□□□ 0.28
HDAC3-203ENST00000467533 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
HDAC3-203ENST00000467533 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
HDAC3-203ENST00000467533 ABCC3O15438 1527 aa16.79■□□□□ 0.28
HDAC3-203ENST00000467533 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
HDAC3-203ENST00000467533 LRRC9Q6ZRR7 1453 aa16.77■□□□□ 0.28
HDAC3-203ENST00000467533 CEP152O94986 1710 aa16.76■□□□□ 0.27
HDAC3-203ENST00000467533 SLIT1O75093 1534 aa16.75■□□□□ 0.27
HDAC3-203ENST00000467533 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
HDAC3-203ENST00000467533 UPF1Q92900 1129 aaKnown RBP eCLIP16.75■□□□□ 0.27
HDAC3-203ENST00000467533 CFAP65Q6ZU64 1925 aaKnown RBP16.74■□□□□ 0.27
HDAC3-203ENST00000467533 CAMSAP2Q08AD1 1489 aa16.74■□□□□ 0.27
HDAC3-203ENST00000467533 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
HDAC3-203ENST00000467533 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
HDAC3-203ENST00000467533 MAP3K1Q13233 1512 aa16.74■□□□□ 0.27
HDAC3-203ENST00000467533 TMEM94Q12767 1356 aa16.74■□□□□ 0.27
HDAC3-203ENST00000467533 EIF2AK4Q9P2K8 1649 aaKnown RBP16.71■□□□□ 0.27
HDAC3-203ENST00000467533 LTKP29376 864 aa16.71■□□□□ 0.27
HDAC3-203ENST00000467533 TXNDC2Q86VQ3 553 aa16.71■□□□□ 0.27
HDAC3-203ENST00000467533 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
HDAC3-203ENST00000467533 JCADQ9P266 1359 aa16.71■□□□□ 0.27
HDAC3-203ENST00000467533 EID1Q9Y6B2 187 aa16.69■□□□□ 0.26
HDAC3-203ENST00000467533 MROH1Q8NDA8 1641 aa16.69■□□□□ 0.26
HDAC3-203ENST00000467533 ARHGEF5Q12774 1597 aa16.68■□□□□ 0.26
HDAC3-203ENST00000467533 PIK3C2BO00750 1634 aa16.68■□□□□ 0.26
HDAC3-203ENST00000467533 COL16A1Q07092 1604 aaPredicted RBP16.68■□□□□ 0.26
HDAC3-203ENST00000467533 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
HDAC3-203ENST00000467533 LRP6O75581 1613 aa16.67■□□□□ 0.26
HDAC3-203ENST00000467533 MEX3CQ5U5Q3 659 aaKnown RBP16.67■□□□□ 0.26
HDAC3-203ENST00000467533 PRDM15P57071 1507 aaPredicted RBP16.66■□□□□ 0.26
HDAC3-203ENST00000467533 NWD1Q149M9 1564 aa16.65■□□□□ 0.26
HDAC3-203ENST00000467533 ZNF772Q68DY9 489 aaPredicted RBP16.65■□□□□ 0.26
HDAC3-203ENST00000467533 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
HDAC3-203ENST00000467533 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
HDAC3-203ENST00000467533 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
HDAC3-203ENST00000467533 MSH6P52701 1360 aa16.64■□□□□ 0.26
HDAC3-203ENST00000467533 RSPH4AQ5TD94 716 aa16.64■□□□□ 0.25
HDAC3-203ENST00000467533 SHPRHQ149N8 1683 aa16.62■□□□□ 0.25
HDAC3-203ENST00000467533 TSPY4P0CV99 314 aa16.62■□□□□ 0.25
HDAC3-203ENST00000467533 TSPY10P0CW01 314 aa16.62■□□□□ 0.25
HDAC3-203ENST00000467533 KCNA6P17658 529 aa16.62■□□□□ 0.25
HDAC3-203ENST00000467533 MAST1Q9Y2H9 1570 aa16.62■□□□□ 0.25
HDAC3-203ENST00000467533 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
HDAC3-203ENST00000467533 KDM5AP29375 1690 aaKnown RBP16.61■□□□□ 0.25
HDAC3-203ENST00000467533 SPATA31A6Q5VVP1 1343 aa16.61■□□□□ 0.25
HDAC3-203ENST00000467533 EFCAB6Q5THR3 1501 aa16.6■□□□□ 0.25
HDAC3-203ENST00000467533 FGD6Q6ZV73 1430 aa16.6■□□□□ 0.25
HDAC3-203ENST00000467533 SLAIN2Q9P270 581 aa16.59■□□□□ 0.25
HDAC3-203ENST00000467533 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
HDAC3-203ENST00000467533 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
HDAC3-203ENST00000467533 TET3O43151 1660 aa16.59■□□□□ 0.25
HDAC3-203ENST00000467533 RXRBP28702 533 aa16.58■□□□□ 0.24
HDAC3-203ENST00000467533 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
HDAC3-203ENST00000467533 ARHGAP31Q2M1Z3 1444 aa16.56■□□□□ 0.24
HDAC3-203ENST00000467533 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
HDAC3-203ENST00000467533 DUOX2Q9NRD8 1548 aa16.54■□□□□ 0.24
HDAC3-203ENST00000467533 CHD2O14647 1828 aaKnown RBP16.52■□□□□ 0.24
HDAC3-203ENST00000467533 ADGRB3O60242 1522 aa16.52■□□□□ 0.24
HDAC3-203ENST00000467533 BCANQ96GW7 911 aa16.51■□□□□ 0.23
HDAC3-203ENST00000467533 RGS12O14924 1447 aa16.51■□□□□ 0.23
HDAC3-203ENST00000467533 DIP2AQ14689 1571 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms