RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 EXOC6Q8TAG9 804 aa17.4■□□□□ 0.38
PDZRN3-205ENST00000466780 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
PDZRN3-205ENST00000466780 KDM2AQ9Y2K7 1162 aa17.39■□□□□ 0.37
PDZRN3-205ENST00000466780 CDC42BPAQ5VT25 1732 aa17.38■□□□□ 0.37
PDZRN3-205ENST00000466780 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
PDZRN3-205ENST00000466780 PLEKHD1A6NEE1 506 aa17.36■□□□□ 0.37
PDZRN3-205ENST00000466780 RCAN3Q9UKA8 241 aa17.36■□□□□ 0.37
PDZRN3-205ENST00000466780 C9orf84Q5VXU9 1444 aa17.36■□□□□ 0.37
PDZRN3-205ENST00000466780 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
PDZRN3-205ENST00000466780 DCAF11Q8TEB1 546 aa17.35■□□□□ 0.37
PDZRN3-205ENST00000466780 PTPRGP23470 1445 aa17.34■□□□□ 0.37
PDZRN3-205ENST00000466780 SALL2Q9Y467 1007 aaPredicted RBP17.34■□□□□ 0.37
PDZRN3-205ENST00000466780 PARD3Q8TEW0 1356 aa17.33■□□□□ 0.37
PDZRN3-205ENST00000466780 NUP160Q12769 1436 aa17.33■□□□□ 0.37
PDZRN3-205ENST00000466780 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.36
PDZRN3-205ENST00000466780 ABCC10Q5T3U5 1492 aa17.32■□□□□ 0.36
PDZRN3-205ENST00000466780 NLRP13Q86W25 1043 aa17.32■□□□□ 0.36
PDZRN3-205ENST00000466780 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
PDZRN3-205ENST00000466780 PDE4AP27815 886 aa17.31■□□□□ 0.36
PDZRN3-205ENST00000466780 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
PDZRN3-205ENST00000466780 PDE3BQ13370 1112 aa17.3■□□□□ 0.36
PDZRN3-205ENST00000466780 CDCA7LQ96GN5 454 aa17.29■□□□□ 0.36
PDZRN3-205ENST00000466780 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
PDZRN3-205ENST00000466780 BACH2Q9BYV9 841 aa17.28■□□□□ 0.36
PDZRN3-205ENST00000466780 TRPM1Q7Z4N2 1603 aa17.27■□□□□ 0.36
PDZRN3-205ENST00000466780 TSPY4P0CV99 314 aa17.27■□□□□ 0.36
PDZRN3-205ENST00000466780 TSPY10P0CW01 314 aa17.27■□□□□ 0.36
PDZRN3-205ENST00000466780 PRAG1Q86YV5 1406 aa17.27■□□□□ 0.36
PDZRN3-205ENST00000466780 MS4A1P11836 297 aa17.26■□□□□ 0.35
PDZRN3-205ENST00000466780 ATP10BO94823 1461 aa17.26■□□□□ 0.35
PDZRN3-205ENST00000466780 ABCA8O94911 1581 aa17.25■□□□□ 0.35
PDZRN3-205ENST00000466780 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDZRN3-205ENST00000466780 NBPF1Q3BBV0 1214 aa17.25■□□□□ 0.35
PDZRN3-205ENST00000466780 FAM135AQ9P2D6 1515 aa17.24■□□□□ 0.35
PDZRN3-205ENST00000466780 PLIN1O60240 522 aa17.23■□□□□ 0.35
PDZRN3-205ENST00000466780 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
PDZRN3-205ENST00000466780 BLMP54132 1417 aaPredicted RBP17.22■□□□□ 0.35
PDZRN3-205ENST00000466780 COL17A1Q9UMD9 1497 aaPredicted RBP17.22■□□□□ 0.35
PDZRN3-205ENST00000466780 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
PDZRN3-205ENST00000466780 GPRASP1Q5JY77 1395 aa17.21■□□□□ 0.35
PDZRN3-205ENST00000466780 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
PDZRN3-205ENST00000466780 DISP3Q9P2K9 1392 aa17.21■□□□□ 0.35
PDZRN3-205ENST00000466780 CC2D1BQ5T0F9 858 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-205ENST00000466780 TESK2Q96S53 571 aa17.2■□□□□ 0.34
PDZRN3-205ENST00000466780 INSRP06213 1382 aa17.2■□□□□ 0.34
PDZRN3-205ENST00000466780 CCDC144AA2RUR9 1427 aa17.2■□□□□ 0.34
PDZRN3-205ENST00000466780 CRBNQ96SW2 442 aa17.2■□□□□ 0.34
PDZRN3-205ENST00000466780 PLA2R1Q13018 1463 aa17.19■□□□□ 0.34
PDZRN3-205ENST00000466780 RGL3Q3MIN7 710 aa17.19■□□□□ 0.34
PDZRN3-205ENST00000466780 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
PDZRN3-205ENST00000466780 A2MP01023 1474 aa17.19■□□□□ 0.34
PDZRN3-205ENST00000466780 ZMYM4Q5VZL5 1548 aa17.18■□□□□ 0.34
PDZRN3-205ENST00000466780 PRDM15P57071 1507 aaPredicted RBP17.17■□□□□ 0.34
PDZRN3-205ENST00000466780 NEFMP07197 916 aa17.17■□□□□ 0.34
PDZRN3-205ENST00000466780 PANK3Q9H999 370 aa17.17■□□□□ 0.34
PDZRN3-205ENST00000466780 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
PDZRN3-205ENST00000466780 LAMC1P11047 1609 aa17.16■□□□□ 0.34
PDZRN3-205ENST00000466780 SAMD9LQ8IVG5 1584 aa17.16■□□□□ 0.34
PDZRN3-205ENST00000466780 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
PDZRN3-205ENST00000466780 ERBINQ96RT1 1412 aa17.14■□□□□ 0.33
PDZRN3-205ENST00000466780 C20orf194Q5TEA3 1177 aa17.13■□□□□ 0.33
PDZRN3-205ENST00000466780 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
PDZRN3-205ENST00000466780 PLEKHH2Q8IVE3 1493 aa17.13■□□□□ 0.33
PDZRN3-205ENST00000466780 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
PDZRN3-205ENST00000466780 UNC13BO14795 1591 aa17.12■□□□□ 0.33
PDZRN3-205ENST00000466780 PPM1GO15355 546 aaPredicted RBP17.11■□□□□ 0.33
PDZRN3-205ENST00000466780 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
PDZRN3-205ENST00000466780 KDM2BQ8NHM5 1336 aa17.1■□□□□ 0.33
PDZRN3-205ENST00000466780 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
PDZRN3-205ENST00000466780 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
PDZRN3-205ENST00000466780 TMF1P82094 1093 aa17.08■□□□□ 0.33
PDZRN3-205ENST00000466780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.33
PDZRN3-205ENST00000466780 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
PDZRN3-205ENST00000466780 RSPH4AQ5TD94 716 aa17.07■□□□□ 0.32
PDZRN3-205ENST00000466780 DDRGK1Q96HY6 314 aa17.07■□□□□ 0.32
PDZRN3-205ENST00000466780 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
PDZRN3-205ENST00000466780 SYCP2Q9BX26 1530 aa17.07■□□□□ 0.32
PDZRN3-205ENST00000466780 IQGAP3Q86VI3 1631 aa17.06■□□□□ 0.32
PDZRN3-205ENST00000466780 MAST1Q9Y2H9 1570 aa17.06■□□□□ 0.32
PDZRN3-205ENST00000466780 MAGI2Q86UL8 1455 aa17.06■□□□□ 0.32
PDZRN3-205ENST00000466780 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
PDZRN3-205ENST00000466780 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
PDZRN3-205ENST00000466780 RNF17Q9BXT8 1623 aaKnown RBP17.04■□□□□ 0.32
PDZRN3-205ENST00000466780 ZNF521Q96K83 1311 aa17.03■□□□□ 0.32
PDZRN3-205ENST00000466780 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
PDZRN3-205ENST00000466780 CENPQQ7L2Z9 268 aaPredicted RBP17.03■□□□□ 0.32
PDZRN3-205ENST00000466780 CHD1O14646 1710 aa17.03■□□□□ 0.32
PDZRN3-205ENST00000466780 ATP10AO60312 1499 aa17.02■□□□□ 0.32
PDZRN3-205ENST00000466780 SLC4A3P48751 1232 aa17.02■□□□□ 0.32
PDZRN3-205ENST00000466780 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.32
PDZRN3-205ENST00000466780 C8orf34Q49A92 452 aa17■□□□□ 0.31
PDZRN3-205ENST00000466780 RTN4Q9NQC3 1192 aaKnown RBP17■□□□□ 0.31
PDZRN3-205ENST00000466780 PLXNC1O60486 1568 aa17■□□□□ 0.31
PDZRN3-205ENST00000466780 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
PDZRN3-205ENST00000466780 NFKBIBQ15653 356 aa17■□□□□ 0.31
PDZRN3-205ENST00000466780 AMER1Q5JTC6 1135 aaPredicted RBP17■□□□□ 0.31
PDZRN3-205ENST00000466780 ANO8Q9HCE9 1232 aaPredicted RBP17■□□□□ 0.31
PDZRN3-205ENST00000466780 WDR43Q15061 677 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDZRN3-205ENST00000466780 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
PDZRN3-205ENST00000466780 GOLGA2Q08379 1002 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms