RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 FANCAO15360 1455 aa21.13■□□□□ 0.97
ABCF3-206ENST00000466742 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
ABCF3-206ENST00000466742 TRAPPC8Q9Y2L5 1435 aa21.1■□□□□ 0.97
ABCF3-206ENST00000466742 PZPP20742 1482 aa21.1■□□□□ 0.97
ABCF3-206ENST00000466742 IPO9Q96P70 1041 aaKnown RBP21.1■□□□□ 0.97
ABCF3-206ENST00000466742 PLXNC1O60486 1568 aa21.1■□□□□ 0.97
ABCF3-206ENST00000466742 ANP32CO43423 234 aa21.09■□□□□ 0.97
ABCF3-206ENST00000466742 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
ABCF3-206ENST00000466742 IRX6P78412 446 aaPredicted RBP21.09■□□□□ 0.97
ABCF3-206ENST00000466742 WASHC2CQ9Y4E1 1318 aa21.08■□□□□ 0.96
ABCF3-206ENST00000466742 RTEL1-TNFRSF6BF6WH68 1400 aa21.06■□□□□ 0.96
ABCF3-206ENST00000466742 CD109Q6YHK3 1445 aa21.06■□□□□ 0.96
ABCF3-206ENST00000466742 KDM5DQ9BY66 1539 aa21.05■□□□□ 0.96
ABCF3-206ENST00000466742 ANKRD30BQ9BXX2 1392 aa21.05■□□□□ 0.96
ABCF3-206ENST00000466742 ADGRL1O94910 1474 aa21.04■□□□□ 0.96
ABCF3-206ENST00000466742 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
ABCF3-206ENST00000466742 NUP155O75694 1391 aa21.03■□□□□ 0.96
ABCF3-206ENST00000466742 SPAG9O60271 1321 aaKnown RBP21.03■□□□□ 0.96
ABCF3-206ENST00000466742 DUOX2Q9NRD8 1548 aa21.03■□□□□ 0.96
ABCF3-206ENST00000466742 AFAP1Q8N556 730 aa21.03■□□□□ 0.96
ABCF3-206ENST00000466742 SCAPERQ9BY12 1400 aa21.02■□□□□ 0.96
ABCF3-206ENST00000466742 USP35Q9P2H5 1018 aa21.02■□□□□ 0.96
ABCF3-206ENST00000466742 ZBTB47Q9UFB7 747 aaPredicted RBP21.02■□□□□ 0.96
ABCF3-206ENST00000466742 ANP32AP39687 249 aaKnown RBP21.01■□□□□ 0.95
ABCF3-206ENST00000466742 ERBINQ96RT1 1412 aa21.01■□□□□ 0.95
ABCF3-206ENST00000466742 FOXD1Q16676 465 aa21■□□□□ 0.95
ABCF3-206ENST00000466742 ZFYVE16Q7Z3T8 1539 aa20.99■□□□□ 0.95
ABCF3-206ENST00000466742 CFAP74Q9C0B2 1584 aa20.98■□□□□ 0.95
ABCF3-206ENST00000466742 PKD2Q13563 968 aa20.96■□□□□ 0.95
ABCF3-206ENST00000466742 RPRD2Q5VT52 1461 aaKnown RBP20.96■□□□□ 0.95
ABCF3-206ENST00000466742 GLI2P10070 1586 aa20.95■□□□□ 0.94
ABCF3-206ENST00000466742 UNC13BO14795 1591 aa20.94■□□□□ 0.94
ABCF3-206ENST00000466742 INO80Q9ULG1 1556 aaPredicted RBP20.94■□□□□ 0.94
ABCF3-206ENST00000466742 NEO1Q92859 1461 aa20.94■□□□□ 0.94
ABCF3-206ENST00000466742 ZNF518AQ6AHZ1 1483 aa20.94■□□□□ 0.94
ABCF3-206ENST00000466742 ATP7AQ04656 1500 aa20.93■□□□□ 0.94
ABCF3-206ENST00000466742 B4GALNT3Q6L9W6 998 aa20.93■□□□□ 0.94
ABCF3-206ENST00000466742 RSPH6AQ9H0K4 717 aa20.92■□□□□ 0.94
ABCF3-206ENST00000466742 FAM135AQ9P2D6 1515 aa20.92■□□□□ 0.94
ABCF3-206ENST00000466742 MAGI2Q86UL8 1455 aa20.92■□□□□ 0.94
ABCF3-206ENST00000466742 HNRNPUQ00839 825 aaKnown RBP eCLIP20.92■□□□□ 0.94
ABCF3-206ENST00000466742 POGZQ7Z3K3 1410 aa20.9■□□□□ 0.94
ABCF3-206ENST00000466742 MAP3K4Q9Y6R4 1608 aa20.89■□□□□ 0.94
ABCF3-206ENST00000466742 KDM5CP41229 1560 aa20.87■□□□□ 0.93
ABCF3-206ENST00000466742 IQGAP3Q86VI3 1631 aa20.86■□□□□ 0.93
ABCF3-206ENST00000466742 L3MBTL2Q969R5 705 aa20.86■□□□□ 0.93
ABCF3-206ENST00000466742 DHX29Q7Z478 1369 aaKnown RBP20.85■□□□□ 0.93
ABCF3-206ENST00000466742 MLH3Q9UHC1 1453 aa20.85■□□□□ 0.93
ABCF3-206ENST00000466742 TEX14Q8IWB6 1497 aa20.85■□□□□ 0.93
ABCF3-206ENST00000466742 DIP2BQ9P265 1576 aa20.84■□□□□ 0.93
ABCF3-206ENST00000466742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.93
ABCF3-206ENST00000466742 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
ABCF3-206ENST00000466742 FAM69CQ0P6D2 419 aa20.83■□□□□ 0.93
ABCF3-206ENST00000466742 NEFMP07197 916 aa20.82■□□□□ 0.92
ABCF3-206ENST00000466742 GLIPR1L2Q4G1C9 344 aa20.82■□□□□ 0.92
ABCF3-206ENST00000466742 KIDINS220Q9ULH0 1771 aa20.82■□□□□ 0.92
ABCF3-206ENST00000466742 EIF2AK4Q9P2K8 1649 aaKnown RBP20.79■□□□□ 0.92
ABCF3-206ENST00000466742 DEPDC5O75140 1603 aa20.79■□□□□ 0.92
ABCF3-206ENST00000466742 HECW2Q9P2P5 1572 aa20.78■□□□□ 0.92
ABCF3-206ENST00000466742 PPM1GO15355 546 aaPredicted RBP20.77■□□□□ 0.92
ABCF3-206ENST00000466742 ATP10AO60312 1499 aa20.76■□□□□ 0.91
ABCF3-206ENST00000466742 A2MP01023 1474 aa20.76■□□□□ 0.91
ABCF3-206ENST00000466742 KIF3BO15066 747 aa20.75■□□□□ 0.91
ABCF3-206ENST00000466742 RAPGEF3O95398 923 aa20.75■□□□□ 0.91
ABCF3-206ENST00000466742 PLA2R1Q13018 1463 aa20.75■□□□□ 0.91
ABCF3-206ENST00000466742 VWDEQ8N2E2 1590 aa20.74■□□□□ 0.91
ABCF3-206ENST00000466742 KANK1Q14678 1352 aa20.74■□□□□ 0.91
ABCF3-206ENST00000466742 GSE1Q14687 1217 aa20.73■□□□□ 0.91
ABCF3-206ENST00000466742 DAXXQ9UER7 740 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-206ENST00000466742 PRDM15P57071 1507 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-206ENST00000466742 PODXL2Q9NZ53 605 aa20.72■□□□□ 0.91
ABCF3-206ENST00000466742 CCDC144AA2RUR9 1427 aa20.72■□□□□ 0.91
ABCF3-206ENST00000466742 FAM43AQ8N2R8 423 aa20.71■□□□□ 0.91
ABCF3-206ENST00000466742 ZMYND15Q9H091 742 aa20.71■□□□□ 0.91
ABCF3-206ENST00000466742 FRMPD1Q5SYB0 1578 aa20.7■□□□□ 0.9
ABCF3-206ENST00000466742 RICTORQ6R327 1708 aa20.7■□□□□ 0.9
ABCF3-206ENST00000466742 MROH1Q8NDA8 1641 aa20.7■□□□□ 0.9
ABCF3-206ENST00000466742 NBPF8Q3BBV2 869 aa20.69■□□□□ 0.9
ABCF3-206ENST00000466742 HIRIP3Q9BW71 556 aaPredicted RBP20.69■□□□□ 0.9
ABCF3-206ENST00000466742 ABCA6Q8N139 1617 aa20.68■□□□□ 0.9
ABCF3-206ENST00000466742 PPRC1Q5VV67 1664 aaKnown RBP20.67■□□□□ 0.9
ABCF3-206ENST00000466742 PLEKHG5O94827 1062 aa20.67■□□□□ 0.9
ABCF3-206ENST00000466742 LAS1LQ9Y4W2 734 aaKnown RBP20.67■□□□□ 0.9
ABCF3-206ENST00000466742 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
ABCF3-206ENST00000466742 TET3O43151 1660 aa20.66■□□□□ 0.9
ABCF3-206ENST00000466742 UHRF1BP1Q6BDS2 1440 aa20.66■□□□□ 0.9
ABCF3-206ENST00000466742 PTPRTO14522 1441 aa20.65■□□□□ 0.9
ABCF3-206ENST00000466742 ZMYM4Q5VZL5 1548 aa20.65■□□□□ 0.9
ABCF3-206ENST00000466742 DIP2CQ9Y2E4 1556 aa20.65■□□□□ 0.9
ABCF3-206ENST00000466742 LMTK2Q8IWU2 1503 aa20.65■□□□□ 0.9
ABCF3-206ENST00000466742 BCORL1Q5H9F3 1711 aa20.64■□□□□ 0.9
ABCF3-206ENST00000466742 E9PCH4 1651 aa20.63■□□□□ 0.89
ABCF3-206ENST00000466742 ZBED9Q6R2W3 1325 aa20.62■□□□□ 0.89
ABCF3-206ENST00000466742 VSIG10Q8N0Z9 540 aa20.61■□□□□ 0.89
ABCF3-206ENST00000466742 TRPM2O94759 1503 aa20.61■□□□□ 0.89
ABCF3-206ENST00000466742 EIF4G2P78344 907 aaKnown RBP eCLIP20.61■□□□□ 0.89
ABCF3-206ENST00000466742 YEATS2Q9ULM3 1422 aa20.61■□□□□ 0.89
ABCF3-206ENST00000466742 KIF13AQ9H1H9 1805 aa20.59■□□□□ 0.89
ABCF3-206ENST00000466742 EFCAB6Q5THR3 1501 aa20.59■□□□□ 0.89
ABCF3-206ENST00000466742 HSPA5P11021 654 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms