RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
UBA3-208ENST00000465627 MYO5CQ9NQX4 1742 aa13.38□□□□□ -0.27
UBA3-208ENST00000465627 DNMT1P26358 1616 aaKnown RBP13.37□□□□□ -0.27
UBA3-208ENST00000465627 CAMSAP2Q08AD1 1489 aa13.36□□□□□ -0.27
UBA3-208ENST00000465627 RICTORQ6R327 1708 aa13.36□□□□□ -0.27
UBA3-208ENST00000465627 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
UBA3-208ENST00000465627 PLCH2O75038 1416 aa13.35□□□□□ -0.27
UBA3-208ENST00000465627 NCOA1Q15788 1441 aa13.35□□□□□ -0.27
UBA3-208ENST00000465627 ZNF644Q9H582 1327 aaPredicted RBP13.34□□□□□ -0.27
UBA3-208ENST00000465627 ARHGEF12Q9NZN5 1544 aa13.33□□□□□ -0.28
UBA3-208ENST00000465627 CROCC2H7BZ55 1655 aa13.33□□□□□ -0.28
UBA3-208ENST00000465627 FAM50AQ14320 339 aaKnown RBP13.32□□□□□ -0.28
UBA3-208ENST00000465627 ABCC5O15440 1437 aa13.32□□□□□ -0.28
UBA3-208ENST00000465627 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
UBA3-208ENST00000465627 MBD5Q9P267 1494 aa13.32□□□□□ -0.28
UBA3-208ENST00000465627 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
UBA3-208ENST00000465627 DAPK1P53355 1430 aa13.31□□□□□ -0.28
UBA3-208ENST00000465627 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
UBA3-208ENST00000465627 NEO1Q92859 1461 aa13.3□□□□□ -0.28
UBA3-208ENST00000465627 KIAA1107Q9UPP5 1409 aa13.29□□□□□ -0.28
UBA3-208ENST00000465627 ARHGAP5Q13017 1502 aa13.29□□□□□ -0.28
UBA3-208ENST00000465627 ALKQ9UM73 1620 aa13.29□□□□□ -0.28
UBA3-208ENST00000465627 HFM1A2PYH4 1435 aa13.28□□□□□ -0.28
UBA3-208ENST00000465627 SHANK2Q9UPX8 1470 aa13.28□□□□□ -0.28
UBA3-208ENST00000465627 ABCC1P33527 1531 aa13.28□□□□□ -0.28
UBA3-208ENST00000465627 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
UBA3-208ENST00000465627 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
UBA3-208ENST00000465627 ADGRL2O95490 1459 aa13.27□□□□□ -0.28
UBA3-208ENST00000465627 GCC2Q8IWJ2 1684 aa13.27□□□□□ -0.29
UBA3-208ENST00000465627 ROCK1Q13464 1354 aa13.27□□□□□ -0.29
UBA3-208ENST00000465627 NAIPQ13075 1403 aa13.27□□□□□ -0.29
UBA3-208ENST00000465627 CAMSAP1Q5T5Y3 1602 aa13.26□□□□□ -0.29
UBA3-208ENST00000465627 TOM1O60784 492 aa13.26□□□□□ -0.29
UBA3-208ENST00000465627 PLEKHH2Q8IVE3 1493 aa13.26□□□□□ -0.29
UBA3-208ENST00000465627 ZFYVE16Q7Z3T8 1539 aa13.26□□□□□ -0.29
UBA3-208ENST00000465627 SYCP2Q9BX26 1530 aa13.26□□□□□ -0.29
UBA3-208ENST00000465627 MAST1Q9Y2H9 1570 aa13.26□□□□□ -0.29
UBA3-208ENST00000465627 C3P01024 1663 aa13.26□□□□□ -0.29
UBA3-208ENST00000465627 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
UBA3-208ENST00000465627 SETD5Q9C0A6 1442 aa13.25□□□□□ -0.29
UBA3-208ENST00000465627 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
UBA3-208ENST00000465627 HRCP23327 699 aa13.24□□□□□ -0.29
UBA3-208ENST00000465627 ITGAEP38570 1179 aa13.24□□□□□ -0.29
UBA3-208ENST00000465627 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
UBA3-208ENST00000465627 RAB3GAP2Q9H2M9 1393 aa13.23□□□□□ -0.29
UBA3-208ENST00000465627 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
UBA3-208ENST00000465627 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
UBA3-208ENST00000465627 EFCAB2Q5VUJ9 269 aa13.22□□□□□ -0.29
UBA3-208ENST00000465627 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
UBA3-208ENST00000465627 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
UBA3-208ENST00000465627 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
UBA3-208ENST00000465627 ZMYM4Q5VZL5 1548 aa13.21□□□□□ -0.29
UBA3-208ENST00000465627 ZNF777Q9ULD5 760 aaPredicted RBP13.2□□□□□ -0.3
UBA3-208ENST00000465627 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
UBA3-208ENST00000465627 C9orf84Q5VXU9 1444 aa13.2□□□□□ -0.3
UBA3-208ENST00000465627 HNRNPMP52272 730 aaKnown RBP eCLIP13.2□□□□□ -0.32e-8■■□□□ 13
UBA3-208ENST00000465627 RSPH4AQ5TD94 716 aa13.2□□□□□ -0.3
UBA3-208ENST00000465627 TRAPPC8Q9Y2L5 1435 aa13.19□□□□□ -0.3
UBA3-208ENST00000465627 PLXNC1O60486 1568 aa13.18□□□□□ -0.3
UBA3-208ENST00000465627 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
UBA3-208ENST00000465627 INO80Q9ULG1 1556 aaPredicted RBP13.16□□□□□ -0.3
UBA3-208ENST00000465627 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
UBA3-208ENST00000465627 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
UBA3-208ENST00000465627 KDM5CP41229 1560 aa13.15□□□□□ -0.3
UBA3-208ENST00000465627 IFFO2Q5TF58 517 aa13.15□□□□□ -0.3
UBA3-208ENST00000465627 RTEL1-TNFRSF6BF6WH68 1400 aa13.14□□□□□ -0.31
UBA3-208ENST00000465627 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
UBA3-208ENST00000465627 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
UBA3-208ENST00000465627 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
UBA3-208ENST00000465627 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
UBA3-208ENST00000465627 KIDINS220Q9ULH0 1771 aa13.11□□□□□ -0.31
UBA3-208ENST00000465627 ZNF518AQ6AHZ1 1483 aa13.11□□□□□ -0.31
UBA3-208ENST00000465627 TSPY4P0CV99 314 aa13.1□□□□□ -0.31
UBA3-208ENST00000465627 TSPY10P0CW01 314 aa13.1□□□□□ -0.31
UBA3-208ENST00000465627 ATP7AQ04656 1500 aa13.1□□□□□ -0.31
UBA3-208ENST00000465627 MAGI2Q86UL8 1455 aa13.1□□□□□ -0.31
UBA3-208ENST00000465627 KIF15Q9NS87 1388 aa13.1□□□□□ -0.31
UBA3-208ENST00000465627 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
UBA3-208ENST00000465627 ANKRD50Q9ULJ7 1429 aa13.09□□□□□ -0.31
UBA3-208ENST00000465627 CLSPNQ9HAW4 1339 aa13.09□□□□□ -0.31
UBA3-208ENST00000465627 ATP10AO60312 1499 aa13.09□□□□□ -0.31
UBA3-208ENST00000465627 MLH3Q9UHC1 1453 aa13.09□□□□□ -0.31
UBA3-208ENST00000465627 CPS1P31327 1500 aa13.09□□□□□ -0.31
UBA3-208ENST00000465627 KDM5DQ9BY66 1539 aa13.08□□□□□ -0.32
UBA3-208ENST00000465627 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.32
UBA3-208ENST00000465627 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
UBA3-208ENST00000465627 UNC13BO14795 1591 aa13.07□□□□□ -0.32
UBA3-208ENST00000465627 HAX1O00165 279 aa13.07□□□□□ -0.32
UBA3-208ENST00000465627 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
UBA3-208ENST00000465627 ACIN1Q9UKV3 1341 aaKnown RBP13.06□□□□□ -0.32
UBA3-208ENST00000465627 PZPP20742 1482 aa13.06□□□□□ -0.32
UBA3-208ENST00000465627 SPAG9O60271 1321 aaKnown RBP13.05□□□□□ -0.32
UBA3-208ENST00000465627 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
UBA3-208ENST00000465627 PKD2Q13563 968 aa13.05□□□□□ -0.32
UBA3-208ENST00000465627 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
UBA3-208ENST00000465627 SETBP1Q9Y6X0 1596 aa13.05□□□□□ -0.32
UBA3-208ENST00000465627 DEPDC5O75140 1603 aa13.04□□□□□ -0.32
UBA3-208ENST00000465627 ABCA6Q8N139 1617 aa13.04□□□□□ -0.32
UBA3-208ENST00000465627 PLA2R1Q13018 1463 aa13.03□□□□□ -0.32
UBA3-208ENST00000465627 EIF2AK4Q9P2K8 1649 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms