RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-206ENST00000465385 JPH4Q96JJ6 628 aa17.83■□□□□ 0.44
MMP11-206ENST00000465385 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.44
MMP11-206ENST00000465385 WDR43Q15061 677 aaKnown RBP eCLIP17.82■□□□□ 0.44
MMP11-206ENST00000465385 ARID4BQ4LE39 1312 aaPredicted RBP17.82■□□□□ 0.44
MMP11-206ENST00000465385 PLB1Q6P1J6 1458 aa17.82■□□□□ 0.44
MMP11-206ENST00000465385 DNMT1P26358 1616 aaKnown RBP17.81■□□□□ 0.44
MMP11-206ENST00000465385 C20orf194Q5TEA3 1177 aa17.81■□□□□ 0.44
MMP11-206ENST00000465385 PPM1GO15355 546 aaPredicted RBP17.8■□□□□ 0.44
MMP11-206ENST00000465385 TROQ12816 1431 aaPredicted RBP17.8■□□□□ 0.44
MMP11-206ENST00000465385 PDE3BQ13370 1112 aa17.78■□□□□ 0.44
MMP11-206ENST00000465385 DDRGK1Q96HY6 314 aa17.77■□□□□ 0.43
MMP11-206ENST00000465385 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
MMP11-206ENST00000465385 CCDC146Q8IYE0 955 aa17.75■□□□□ 0.43
MMP11-206ENST00000465385 GPATCH8Q9UKJ3 1502 aaKnown RBP17.75■□□□□ 0.43
MMP11-206ENST00000465385 C9orf84Q5VXU9 1444 aa17.75■□□□□ 0.43
MMP11-206ENST00000465385 LRPPRCP42704 1394 aaKnown RBP17.75■□□□□ 0.43
MMP11-206ENST00000465385 ADAMTS8Q9UP79 889 aa17.75■□□□□ 0.43
MMP11-206ENST00000465385 KNSTRNQ9Y448 316 aa17.74■□□□□ 0.43
MMP11-206ENST00000465385 MS4A1P11836 297 aa17.74■□□□□ 0.43
MMP11-206ENST00000465385 TMF1P82094 1093 aa17.73■□□□□ 0.43
MMP11-206ENST00000465385 CCDC144AA2RUR9 1427 aa17.73■□□□□ 0.43
MMP11-206ENST00000465385 BRPF3Q9ULD4 1205 aa17.73■□□□□ 0.43
MMP11-206ENST00000465385 EIF5BO60841 1220 aaKnown RBP17.73■□□□□ 0.43
MMP11-206ENST00000465385 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
MMP11-206ENST00000465385 ARXQ96QS3 562 aa17.73■□□□□ 0.43
MMP11-206ENST00000465385 RALGAPBQ86X10 1494 aa17.73■□□□□ 0.43
MMP11-206ENST00000465385 KDM5CP41229 1560 aa17.72■□□□□ 0.43
MMP11-206ENST00000465385 ADAMTS12P58397 1594 aa17.71■□□□□ 0.43
MMP11-206ENST00000465385 MBD5Q9P267 1494 aa17.71■□□□□ 0.43
MMP11-206ENST00000465385 DISP1Q96F81 1524 aa17.71■□□□□ 0.43
MMP11-206ENST00000465385 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.43
MMP11-206ENST00000465385 KIF14Q15058 1648 aa17.71■□□□□ 0.43
MMP11-206ENST00000465385 RAPGEF6Q8TEU7 1601 aa17.7■□□□□ 0.42
MMP11-206ENST00000465385 NFKBIBQ15653 356 aa17.69■□□□□ 0.42
MMP11-206ENST00000465385 CARMIL2Q6F5E8 1435 aa17.69■□□□□ 0.42
MMP11-206ENST00000465385 PBRM1Q86U86 1689 aa17.69■□□□□ 0.42
MMP11-206ENST00000465385 KIAA0556O60303 1618 aa17.68■□□□□ 0.42
MMP11-206ENST00000465385 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
MMP11-206ENST00000465385 DISP3Q9P2K9 1392 aa17.68■□□□□ 0.42
MMP11-206ENST00000465385 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.67■□□□□ 0.42
MMP11-206ENST00000465385 NEUROD2Q15784 382 aa17.67■□□□□ 0.42
MMP11-206ENST00000465385 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
MMP11-206ENST00000465385 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
MMP11-206ENST00000465385 GSE1Q14687 1217 aa17.65■□□□□ 0.42
MMP11-206ENST00000465385 PARD3Q8TEW0 1356 aa17.65■□□□□ 0.42
MMP11-206ENST00000465385 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
MMP11-206ENST00000465385 POLR1AO95602 1720 aaPredicted RBP17.63■□□□□ 0.41
MMP11-206ENST00000465385 FRAT1Q92837 279 aaPredicted RBP17.63■□□□□ 0.41
MMP11-206ENST00000465385 TNNT2P45379 298 aaPredicted RBP17.63■□□□□ 0.41
MMP11-206ENST00000465385 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
MMP11-206ENST00000465385 UHRF1BP1Q6BDS2 1440 aa17.62■□□□□ 0.41
MMP11-206ENST00000465385 CENPQQ7L2Z9 268 aaPredicted RBP17.62■□□□□ 0.41
MMP11-206ENST00000465385 FAM161AQ3B820 660 aa17.62■□□□□ 0.41
MMP11-206ENST00000465385 APAF1O14727 1248 aa17.6■□□□□ 0.41
MMP11-206ENST00000465385 FRAT2O75474 233 aaPredicted RBP17.6■□□□□ 0.41
MMP11-206ENST00000465385 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
MMP11-206ENST00000465385 SYNJ2O15056 1496 aa17.6■□□□□ 0.41
MMP11-206ENST00000465385 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
MMP11-206ENST00000465385 BCAR3O75815 825 aa17.59■□□□□ 0.41
MMP11-206ENST00000465385 TESK2Q96S53 571 aa17.58■□□□□ 0.41
MMP11-206ENST00000465385 ERBINQ96RT1 1412 aa17.58■□□□□ 0.4
MMP11-206ENST00000465385 ADGRL2O95490 1459 aa17.57■□□□□ 0.4
MMP11-206ENST00000465385 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
MMP11-206ENST00000465385 PRKCSHP14314 528 aaPredicted RBP17.57■□□□□ 0.4
MMP11-206ENST00000465385 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
MMP11-206ENST00000465385 ITSN2Q9NZM3 1697 aa17.56■□□□□ 0.4
MMP11-206ENST00000465385 DUSP27Q5VZP5 1158 aa17.56■□□□□ 0.4
MMP11-206ENST00000465385 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
MMP11-206ENST00000465385 SPRYD3Q8NCJ5 442 aa17.55■□□□□ 0.4
MMP11-206ENST00000465385 PLEKHH1Q9ULM0 1364 aa17.55■□□□□ 0.4
MMP11-206ENST00000465385 ADGBQ8N7X0 1667 aa17.54■□□□□ 0.4
MMP11-206ENST00000465385 PTPRGP23470 1445 aa17.54■□□□□ 0.4
MMP11-206ENST00000465385 ARHGEF12Q9NZN5 1544 aa17.54■□□□□ 0.4
MMP11-206ENST00000465385 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
MMP11-206ENST00000465385 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
MMP11-206ENST00000465385 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
MMP11-206ENST00000465385 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.4
MMP11-206ENST00000465385 C8orf34Q49A92 452 aa17.51■□□□□ 0.39
MMP11-206ENST00000465385 PANK1Q8TE04 598 aa17.51■□□□□ 0.39
MMP11-206ENST00000465385 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
MMP11-206ENST00000465385 CLUAP1Q96AJ1 413 aa17.5■□□□□ 0.39
MMP11-206ENST00000465385 FAM135AQ9P2D6 1515 aa17.5■□□□□ 0.39
MMP11-206ENST00000465385 ATP10BO94823 1461 aa17.49■□□□□ 0.39
MMP11-206ENST00000465385 WASHC2CQ9Y4E1 1318 aa17.49■□□□□ 0.39
MMP11-206ENST00000465385 KDM2BQ8NHM5 1336 aa17.48■□□□□ 0.39
MMP11-206ENST00000465385 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
MMP11-206ENST00000465385 COL17A1Q9UMD9 1497 aaPredicted RBP17.47■□□□□ 0.39
MMP11-206ENST00000465385 A2MP01023 1474 aa17.47■□□□□ 0.39
MMP11-206ENST00000465385 SLFN5Q08AF3 891 aa17.46■□□□□ 0.39
MMP11-206ENST00000465385 BLMP54132 1417 aaPredicted RBP17.46■□□□□ 0.39
MMP11-206ENST00000465385 CCDC141Q6ZP82 1450 aa17.46■□□□□ 0.38
MMP11-206ENST00000465385 IGHDP01880 384 aa17.45■□□□□ 0.38
MMP11-206ENST00000465385 PLEKHH2Q8IVE3 1493 aa17.45■□□□□ 0.38
MMP11-206ENST00000465385 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
MMP11-206ENST00000465385 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
MMP11-206ENST00000465385 CENPJQ9HC77 1338 aaPredicted RBP17.44■□□□□ 0.38
MMP11-206ENST00000465385 BECN1Q14457 450 aa17.43■□□□□ 0.38
MMP11-206ENST00000465385 AMER1Q5JTC6 1135 aaPredicted RBP17.43■□□□□ 0.38
MMP11-206ENST00000465385 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
MMP11-206ENST00000465385 ARHGAP5Q13017 1502 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms