RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 RGS17Q9UGC6 210 aaPredicted RBP24.73■■□□□ 1.55
HDAC6-214ENST00000465269 CFDP1Q9UEE9 299 aaPredicted RBP24.71■■□□□ 1.55
HDAC6-214ENST00000465269 ZNF644Q9H582 1327 aaPredicted RBP24.7■■□□□ 1.54
HDAC6-214ENST00000465269 KIAA1107Q9UPP5 1409 aa24.69■■□□□ 1.54
HDAC6-214ENST00000465269 ANKLE2Q86XL3 938 aa24.68■■□□□ 1.54
HDAC6-214ENST00000465269 ADGBQ8N7X0 1667 aa24.67■■□□□ 1.54
HDAC6-214ENST00000465269 STRCP1A6NGW2 1772 aa24.67■■□□□ 1.54
HDAC6-214ENST00000465269 NPHP4O75161 1426 aaPredicted RBP24.66■■□□□ 1.54
HDAC6-214ENST00000465269 PLEKHH2Q8IVE3 1493 aa24.64■■□□□ 1.53
HDAC6-214ENST00000465269 LRRC7Q96NW7 1537 aa24.63■■□□□ 1.53
HDAC6-214ENST00000465269 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
HDAC6-214ENST00000465269 KIF3BO15066 747 aa24.61■■□□□ 1.53
HDAC6-214ENST00000465269 PZPP20742 1482 aa24.61■■□□□ 1.53
HDAC6-214ENST00000465269 FYCO1Q9BQS8 1478 aa24.61■■□□□ 1.53
HDAC6-214ENST00000465269 THEMISQ8N1K5 641 aaPredicted RBP24.59■■□□□ 1.53
HDAC6-214ENST00000465269 UGGT1Q9NYU2 1555 aa24.59■■□□□ 1.53
HDAC6-214ENST00000465269 MED14O60244 1454 aa24.58■■□□□ 1.53
HDAC6-214ENST00000465269 DHX29Q7Z478 1369 aaKnown RBP24.58■■□□□ 1.53
HDAC6-214ENST00000465269 IQGAP1P46940 1657 aa24.57■■□□□ 1.52
HDAC6-214ENST00000465269 MIA2Q96PC5 1412 aa24.57■■□□□ 1.52
HDAC6-214ENST00000465269 MBD5Q9P267 1494 aa24.57■■□□□ 1.52
HDAC6-214ENST00000465269 POTEAQ6S8J7 498 aa24.56■■□□□ 1.52
HDAC6-214ENST00000465269 DEPDC5O75140 1603 aa24.56■■□□□ 1.52
HDAC6-214ENST00000465269 RNF17Q9BXT8 1623 aaKnown RBP24.56■■□□□ 1.52
HDAC6-214ENST00000465269 KDM5DQ9BY66 1539 aa24.56■■□□□ 1.52
HDAC6-214ENST00000465269 WASHC2CQ9Y4E1 1318 aa24.55■■□□□ 1.52
HDAC6-214ENST00000465269 FAM135AQ9P2D6 1515 aa24.54■■□□□ 1.52
HDAC6-214ENST00000465269 NLRP1Q9C000 1473 aa24.51■■□□□ 1.51
HDAC6-214ENST00000465269 TIAM1Q13009 1591 aa24.5■■□□□ 1.51
HDAC6-214ENST00000465269 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
HDAC6-214ENST00000465269 MTUS2Q5JR59 1369 aa24.49■■□□□ 1.51
HDAC6-214ENST00000465269 RTEL1-TNFRSF6BF6WH68 1400 aa24.49■■□□□ 1.51
HDAC6-214ENST00000465269 SYNMO15061 1565 aa24.48■■□□□ 1.51
HDAC6-214ENST00000465269 SETD1AO15047 1707 aaKnown RBP24.45■■□□□ 1.5
HDAC6-214ENST00000465269 ZC3H13Q5T200 1668 aaKnown RBP24.43■■□□□ 1.5
HDAC6-214ENST00000465269 XIRP1Q702N8 1843 aaKnown RBP24.42■■□□□ 1.5
HDAC6-214ENST00000465269 CCDC141Q6ZP82 1450 aa24.38■■□□□ 1.49
HDAC6-214ENST00000465269 LTKP29376 864 aa24.38■■□□□ 1.49
HDAC6-214ENST00000465269 ABCC3O15438 1527 aa24.35■■□□□ 1.49
HDAC6-214ENST00000465269 ERVK-7P63135 1459 aa24.35■■□□□ 1.49
HDAC6-214ENST00000465269 CAMSAP2Q08AD1 1489 aa24.34■■□□□ 1.49
HDAC6-214ENST00000465269 SCAF11Q99590 1463 aaKnown RBP24.34■■□□□ 1.49
HDAC6-214ENST00000465269 CFAP65Q6ZU64 1925 aaKnown RBP24.34■■□□□ 1.49
HDAC6-214ENST00000465269 RBM33Q96EV2 1170 aaKnown RBP24.34■■□□□ 1.49
HDAC6-214ENST00000465269 UBR1Q8IWV7 1749 aa24.32■■□□□ 1.48
HDAC6-214ENST00000465269 NCOA2Q15596 1464 aa24.32■■□□□ 1.48
HDAC6-214ENST00000465269 FAM135BQ49AJ0 1406 aa24.31■■□□□ 1.48
HDAC6-214ENST00000465269 TXNDC2Q86VQ3 553 aa24.31■■□□□ 1.48
HDAC6-214ENST00000465269 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
HDAC6-214ENST00000465269 SRCAPQ6ZRS2 3230 aa24.29■■□□□ 1.48
HDAC6-214ENST00000465269 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
HDAC6-214ENST00000465269 ROBO1Q9Y6N7 1651 aa24.27■■□□□ 1.48
HDAC6-214ENST00000465269 TMEM94Q12767 1356 aa24.27■■□□□ 1.48
HDAC6-214ENST00000465269 ARHGAP23Q9P227 1491 aa24.25■■□□□ 1.47
HDAC6-214ENST00000465269 CEP152O94986 1710 aa24.24■■□□□ 1.47
HDAC6-214ENST00000465269 MROH1Q8NDA8 1641 aa24.24■■□□□ 1.47
HDAC6-214ENST00000465269 SLIT1O75093 1534 aa24.22■■□□□ 1.47
HDAC6-214ENST00000465269 TSPY4P0CV99 314 aa24.21■■□□□ 1.47
HDAC6-214ENST00000465269 TSPY10P0CW01 314 aa24.21■■□□□ 1.47
HDAC6-214ENST00000465269 MAP3K1Q13233 1512 aa24.2■■□□□ 1.46
HDAC6-214ENST00000465269 ARHGEF5Q12774 1597 aa24.18■■□□□ 1.46
HDAC6-214ENST00000465269 RSPH4AQ5TD94 716 aa24.18■■□□□ 1.46
HDAC6-214ENST00000465269 UPF1Q92900 1129 aaKnown RBP eCLIP24.18■■□□□ 1.46
HDAC6-214ENST00000465269 PROSER2Q86WR7 435 aaPredicted RBP24.17■■□□□ 1.46
HDAC6-214ENST00000465269 SLC26A8Q96RN1 970 aa24.17■■□□□ 1.46
HDAC6-214ENST00000465269 EID1Q9Y6B2 187 aa24.17■■□□□ 1.46
HDAC6-214ENST00000465269 TRIM52Q96A61 297 aa24.16■■□□□ 1.46
HDAC6-214ENST00000465269 PIK3C2BO00750 1634 aa24.14■■□□□ 1.46
HDAC6-214ENST00000465269 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
HDAC6-214ENST00000465269 TMEM2Q9UHN6 1383 aa24.13■■□□□ 1.45
HDAC6-214ENST00000465269 KCNA6P17658 529 aa24.12■■□□□ 1.45
HDAC6-214ENST00000465269 LRP6O75581 1613 aa24.11■■□□□ 1.45
HDAC6-214ENST00000465269 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
HDAC6-214ENST00000465269 JCADQ9P266 1359 aa24.1■■□□□ 1.45
HDAC6-214ENST00000465269 STAG3Q9UJ98 1225 aa24.08■■□□□ 1.45
HDAC6-214ENST00000465269 MAST1Q9Y2H9 1570 aa24.08■■□□□ 1.44
HDAC6-214ENST00000465269 SLAIN2Q9P270 581 aa24.07■■□□□ 1.44
HDAC6-214ENST00000465269 LRRC9Q6ZRR7 1453 aa24.07■■□□□ 1.44
HDAC6-214ENST00000465269 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
HDAC6-214ENST00000465269 TET3O43151 1660 aa24.05■■□□□ 1.44
HDAC6-214ENST00000465269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.05■■□□□ 1.442e-7■■□□□ 14.2
HDAC6-214ENST00000465269 MSH6P52701 1360 aa24.03■■□□□ 1.44
HDAC6-214ENST00000465269 COL16A1Q07092 1604 aaPredicted RBP24.03■■□□□ 1.44
HDAC6-214ENST00000465269 MEX3CQ5U5Q3 659 aaKnown RBP24.03■■□□□ 1.44
HDAC6-214ENST00000465269 ARHGAP31Q2M1Z3 1444 aa24.02■■□□□ 1.44
HDAC6-214ENST00000465269 EFCAB6Q5THR3 1501 aa24.02■■□□□ 1.44
HDAC6-214ENST00000465269 IDI1Q13907 227 aa24.02■■□□□ 1.44
HDAC6-214ENST00000465269 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
HDAC6-214ENST00000465269 BCANQ96GW7 911 aa23.99■■□□□ 1.43
HDAC6-214ENST00000465269 NKTRP30414 1462 aaKnown RBP23.99■■□□□ 1.43
HDAC6-214ENST00000465269 DUOX2Q9NRD8 1548 aa23.99■■□□□ 1.43
HDAC6-214ENST00000465269 ZNF772Q68DY9 489 aaPredicted RBP23.96■■□□□ 1.43
HDAC6-214ENST00000465269 RRP7BPQ9NSQ0 103 aa23.96■■□□□ 1.43
HDAC6-214ENST00000465269 KIF15Q9NS87 1388 aa23.95■■□□□ 1.42
HDAC6-214ENST00000465269 RXRBP28702 533 aa23.93■■□□□ 1.42
HDAC6-214ENST00000465269 SPATA31A6Q5VVP1 1343 aa23.92■■□□□ 1.42
HDAC6-214ENST00000465269 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
HDAC6-214ENST00000465269 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
HDAC6-214ENST00000465269 NUTM2AQ8IVF1 878 aaPredicted RBP23.92■■□□□ 1.42
HDAC6-214ENST00000465269 KDM5AP29375 1690 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms