RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 ADGRL1O94910 1474 aa14.3□□□□□ -0.12
MSH5-211ENST00000463144 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
MSH5-211ENST00000463144 ATP7AQ04656 1500 aa14.28□□□□□ -0.12
MSH5-211ENST00000463144 ZNF326Q5BKZ1 582 aaKnown RBP14.28□□□□□ -0.12
MSH5-211ENST00000463144 CYB5RLQ6IPT4 315 aa14.27□□□□□ -0.12
MSH5-211ENST00000463144 ANP32CO43423 234 aa14.27□□□□□ -0.13
MSH5-211ENST00000463144 CCDC7Q96M83 1385 aa14.27□□□□□ -0.13
MSH5-211ENST00000463144 CCDC144AA2RUR9 1427 aa14.26□□□□□ -0.13
MSH5-211ENST00000463144 POLR1AO95602 1720 aaPredicted RBP14.25□□□□□ -0.13
MSH5-211ENST00000463144 RALGAPBQ86X10 1494 aa14.25□□□□□ -0.13
MSH5-211ENST00000463144 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
MSH5-211ENST00000463144 DEPDC5O75140 1603 aa14.25□□□□□ -0.13
MSH5-211ENST00000463144 ATP10AO60312 1499 aa14.25□□□□□ -0.13
MSH5-211ENST00000463144 DCAF11Q8TEB1 546 aa14.25□□□□□ -0.13
MSH5-211ENST00000463144 KDM5CP41229 1560 aa14.25□□□□□ -0.13
MSH5-211ENST00000463144 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
MSH5-211ENST00000463144 CCER2I3L3R5 266 aa14.24□□□□□ -0.13
MSH5-211ENST00000463144 BCORL1Q5H9F3 1711 aa14.23□□□□□ -0.13
MSH5-211ENST00000463144 E9PCH4 1651 aa14.23□□□□□ -0.13
MSH5-211ENST00000463144 KIDINS220Q9ULH0 1771 aa14.23□□□□□ -0.13
MSH5-211ENST00000463144 USP47Q96K76 1375 aa14.23□□□□□ -0.13
MSH5-211ENST00000463144 KIF7Q2M1P5 1343 aa14.22□□□□□ -0.13
MSH5-211ENST00000463144 CNTLNQ9NXG0 1405 aa14.22□□□□□ -0.13
MSH5-211ENST00000463144 DHX29Q7Z478 1369 aaKnown RBP14.21□□□□□ -0.13
MSH5-211ENST00000463144 RGL3Q3MIN7 710 aa14.21□□□□□ -0.14
MSH5-211ENST00000463144 VWDEQ8N2E2 1590 aa14.21□□□□□ -0.14
MSH5-211ENST00000463144 A2MP01023 1474 aa14.2□□□□□ -0.14
MSH5-211ENST00000463144 CFAP74Q9C0B2 1584 aa14.2□□□□□ -0.14
MSH5-211ENST00000463144 EIF2AK4Q9P2K8 1649 aaKnown RBP14.19□□□□□ -0.14
MSH5-211ENST00000463144 ZNF518AQ6AHZ1 1483 aa14.19□□□□□ -0.14
MSH5-211ENST00000463144 PRAG1Q86YV5 1406 aa14.19□□□□□ -0.14
MSH5-211ENST00000463144 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
MSH5-211ENST00000463144 MROH1Q8NDA8 1641 aa14.19□□□□□ -0.14
MSH5-211ENST00000463144 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
MSH5-211ENST00000463144 CARD11Q9BXL7 1154 aa14.18□□□□□ -0.14
MSH5-211ENST00000463144 KIF3BO15066 747 aa14.18□□□□□ -0.14
MSH5-211ENST00000463144 TET3O43151 1660 aa14.18□□□□□ -0.14
MSH5-211ENST00000463144 POGZQ7Z3K3 1410 aa14.17□□□□□ -0.14
MSH5-211ENST00000463144 PRDM15P57071 1507 aaPredicted RBP14.16□□□□□ -0.14
MSH5-211ENST00000463144 PTPRTO14522 1441 aa14.16□□□□□ -0.14
MSH5-211ENST00000463144 SPHKAPQ2M3C7 1700 aa14.16□□□□□ -0.14
MSH5-211ENST00000463144 TRPM2O94759 1503 aa14.16□□□□□ -0.14
MSH5-211ENST00000463144 MLH3Q9UHC1 1453 aa14.14□□□□□ -0.15
MSH5-211ENST00000463144 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
MSH5-211ENST00000463144 KANK1Q14678 1352 aa14.14□□□□□ -0.15
MSH5-211ENST00000463144 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
MSH5-211ENST00000463144 CLTCL1P53675 1640 aa14.13□□□□□ -0.15
MSH5-211ENST00000463144 ST20-MTHFSA0A0A6YYL1 179 aa14.13□□□□□ -0.15
MSH5-211ENST00000463144 NEO1Q92859 1461 aa14.13□□□□□ -0.15
MSH5-211ENST00000463144 CEP152O94986 1710 aa14.13□□□□□ -0.15
MSH5-211ENST00000463144 MAP3K4Q9Y6R4 1608 aa14.12□□□□□ -0.15
MSH5-211ENST00000463144 FRMPD1Q5SYB0 1578 aa14.12□□□□□ -0.15
MSH5-211ENST00000463144 HECW2Q9P2P5 1572 aa14.12□□□□□ -0.15
MSH5-211ENST00000463144 GPRASP1Q5JY77 1395 aa14.11□□□□□ -0.15
MSH5-211ENST00000463144 ARID4BQ4LE39 1312 aaPredicted RBP14.11□□□□□ -0.15
MSH5-211ENST00000463144 RNF17Q9BXT8 1623 aaKnown RBP14.11□□□□□ -0.15
MSH5-211ENST00000463144 PRKRIP1Q9H875 184 aaPredicted RBP14.11□□□□□ -0.15
MSH5-211ENST00000463144 ABCA6Q8N139 1617 aa14.1□□□□□ -0.15
MSH5-211ENST00000463144 RAPGEF3O95398 923 aa14.1□□□□□ -0.15
MSH5-211ENST00000463144 LAMC1P11047 1609 aa14.1□□□□□ -0.15
MSH5-211ENST00000463144 EFCAB6Q5THR3 1501 aa14.09□□□□□ -0.15
MSH5-211ENST00000463144 CCDC184Q52MB2 194 aa14.09□□□□□ -0.15
MSH5-211ENST00000463144 GLI2P10070 1586 aa14.09□□□□□ -0.15
MSH5-211ENST00000463144 PPRC1Q5VV67 1664 aaKnown RBP14.09□□□□□ -0.15
MSH5-211ENST00000463144 LMTK2Q8IWU2 1503 aa14.09□□□□□ -0.15
MSH5-211ENST00000463144 POLR3GLQ9BT43 218 aa14.08□□□□□ -0.16
MSH5-211ENST00000463144 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
MSH5-211ENST00000463144 MADDQ8WXG6 1647 aa14.07□□□□□ -0.16
MSH5-211ENST00000463144 UGGT1Q9NYU2 1555 aa14.06□□□□□ -0.16
MSH5-211ENST00000463144 DIP2BQ9P265 1576 aa14.05□□□□□ -0.16
MSH5-211ENST00000463144 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
MSH5-211ENST00000463144 NEURL4Q96JN8 1562 aa14.04□□□□□ -0.16
MSH5-211ENST00000463144 GGT6Q6P531 493 aa14.03□□□□□ -0.16
MSH5-211ENST00000463144 KIF13AQ9H1H9 1805 aa14.03□□□□□ -0.16
MSH5-211ENST00000463144 TESK2Q96S53 571 aa14.03□□□□□ -0.16
MSH5-211ENST00000463144 KIF1BO60333 1816 aa14.02□□□□□ -0.17
MSH5-211ENST00000463144 FAM69CQ0P6D2 419 aa14.02□□□□□ -0.17
MSH5-211ENST00000463144 STAC3Q96MF2 364 aa14.01□□□□□ -0.17
MSH5-211ENST00000463144 NPATQ14207 1427 aa14.01□□□□□ -0.17
MSH5-211ENST00000463144 MROH2AA6NES4 1674 aa14.01□□□□□ -0.17
MSH5-211ENST00000463144 CFAP65Q6ZU64 1925 aaKnown RBP14.01□□□□□ -0.17
MSH5-211ENST00000463144 ABCC3O15438 1527 aa14□□□□□ -0.17
MSH5-211ENST00000463144 YEATS2Q9ULM3 1422 aa14□□□□□ -0.17
MSH5-211ENST00000463144 IQGAP1P46940 1657 aa14□□□□□ -0.17
MSH5-211ENST00000463144 IFT172Q9UG01 1749 aa13.99□□□□□ -0.17
MSH5-211ENST00000463144 COL17A1Q9UMD9 1497 aaPredicted RBP13.99□□□□□ -0.17
MSH5-211ENST00000463144 DISP3Q9P2K9 1392 aa13.98□□□□□ -0.17
MSH5-211ENST00000463144 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
MSH5-211ENST00000463144 TSPOAP1O95153 1857 aa13.98□□□□□ -0.17
MSH5-211ENST00000463144 CAMSAP1Q5T5Y3 1602 aa13.97□□□□□ -0.17
MSH5-211ENST00000463144 WASHC2CQ9Y4E1 1318 aa13.97□□□□□ -0.17
MSH5-211ENST00000463144 CNGB1Q14028 1251 aaPredicted RBP13.97□□□□□ -0.17
MSH5-211ENST00000463144 SIGLEC1Q9BZZ2 1709 aa13.97□□□□□ -0.17
MSH5-211ENST00000463144 KIAA1210Q9ULL0 1709 aa13.97□□□□□ -0.17
MSH5-211ENST00000463144 HNRNPUQ00839 825 aaKnown RBP eCLIP13.97□□□□□ -0.17
MSH5-211ENST00000463144 ADGRF5Q8IZF2 1346 aa13.96□□□□□ -0.17
MSH5-211ENST00000463144 MYOM2P54296 1465 aa13.96□□□□□ -0.17
MSH5-211ENST00000463144 ADGRB3O60242 1522 aa13.96□□□□□ -0.17
MSH5-211ENST00000463144 ZMYM4Q5VZL5 1548 aa13.95□□□□□ -0.18
MSH5-211ENST00000463144 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms