RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 KIF15Q9NS87 1388 aa13.99□□□□□ -0.17
TRAPPC12-214ENST00000462983 ANKRD30AQ9BXX3 1397 aa13.98□□□□□ -0.17
TRAPPC12-214ENST00000462983 ITGAEP38570 1179 aa13.98□□□□□ -0.17
TRAPPC12-214ENST00000462983 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
TRAPPC12-214ENST00000462983 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
TRAPPC12-214ENST00000462983 PTPRKQ15262 1439 aa13.97□□□□□ -0.17
TRAPPC12-214ENST00000462983 CEP152O94986 1710 aa13.96□□□□□ -0.17
TRAPPC12-214ENST00000462983 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
TRAPPC12-214ENST00000462983 PREX1Q8TCU6 1659 aa13.95□□□□□ -0.18
TRAPPC12-214ENST00000462983 ADGRL2O95490 1459 aa13.95□□□□□ -0.18
TRAPPC12-214ENST00000462983 MROH1Q8NDA8 1641 aa13.94□□□□□ -0.18
TRAPPC12-214ENST00000462983 ERBINQ96RT1 1412 aa13.94□□□□□ -0.18
TRAPPC12-214ENST00000462983 KDM5DQ9BY66 1539 aa13.94□□□□□ -0.18
TRAPPC12-214ENST00000462983 ZMYM3Q14202 1370 aa13.94□□□□□ -0.18
TRAPPC12-214ENST00000462983 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
TRAPPC12-214ENST00000462983 ZC3H13Q5T200 1668 aaKnown RBP13.92□□□□□ -0.18
TRAPPC12-214ENST00000462983 LMTK3Q96Q04 1460 aa13.92□□□□□ -0.18
TRAPPC12-214ENST00000462983 WASHC2CQ9Y4E1 1318 aa13.91□□□□□ -0.18
TRAPPC12-214ENST00000462983 DEPDC5O75140 1603 aa13.91□□□□□ -0.18
TRAPPC12-214ENST00000462983 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.18
TRAPPC12-214ENST00000462983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.182e-9■□□□□ 8.5
TRAPPC12-214ENST00000462983 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.19
TRAPPC12-214ENST00000462983 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.19
TRAPPC12-214ENST00000462983 ABCC3O15438 1527 aa13.89□□□□□ -0.19
TRAPPC12-214ENST00000462983 ANKRD50Q9ULJ7 1429 aa13.89□□□□□ -0.19
TRAPPC12-214ENST00000462983 ROCK1Q13464 1354 aa13.88□□□□□ -0.19
TRAPPC12-214ENST00000462983 HSPA2P54652 639 aa13.87□□□□□ -0.19
TRAPPC12-214ENST00000462983 TRIM26Q12899 539 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-214ENST00000462983 UHRF1BP1Q6BDS2 1440 aa13.87□□□□□ -0.19
TRAPPC12-214ENST00000462983 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
TRAPPC12-214ENST00000462983 NPATQ14207 1427 aa13.86□□□□□ -0.19
TRAPPC12-214ENST00000462983 PZPP20742 1482 aa13.86□□□□□ -0.19
TRAPPC12-214ENST00000462983 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC12-214ENST00000462983 KANK1Q14678 1352 aa13.84□□□□□ -0.19
TRAPPC12-214ENST00000462983 GCC2Q8IWJ2 1684 aa13.84□□□□□ -0.19
TRAPPC12-214ENST00000462983 UNC13BO14795 1591 aa13.83□□□□□ -0.19
TRAPPC12-214ENST00000462983 ZNF142P52746 1687 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC12-214ENST00000462983 VWDEQ8N2E2 1590 aa13.83□□□□□ -0.2
TRAPPC12-214ENST00000462983 TNRQ92752 1358 aa13.81□□□□□ -0.2
TRAPPC12-214ENST00000462983 STRCQ7RTU9 1775 aa13.81□□□□□ -0.2
TRAPPC12-214ENST00000462983 CEP170BQ9Y4F5 1589 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-214ENST00000462983 TET3O43151 1660 aa13.79□□□□□ -0.2
TRAPPC12-214ENST00000462983 ERVK-7P63135 1459 aa13.79□□□□□ -0.2
TRAPPC12-214ENST00000462983 LMTK2Q8IWU2 1503 aa13.79□□□□□ -0.2
TRAPPC12-214ENST00000462983 SPATA31D1Q6ZQQ2 1576 aa13.79□□□□□ -0.2
TRAPPC12-214ENST00000462983 NAIPQ13075 1403 aa13.78□□□□□ -0.2
TRAPPC12-214ENST00000462983 EFCAB6Q5THR3 1501 aa13.78□□□□□ -0.2
TRAPPC12-214ENST00000462983 IQGAP3Q86VI3 1631 aa13.78□□□□□ -0.2
TRAPPC12-214ENST00000462983 HFM1A2PYH4 1435 aa13.77□□□□□ -0.21
TRAPPC12-214ENST00000462983 ARHGAP31Q2M1Z3 1444 aa13.77□□□□□ -0.21
TRAPPC12-214ENST00000462983 E9PCH4 1651 aa13.76□□□□□ -0.21
TRAPPC12-214ENST00000462983 A2ML1A8K2U0 1454 aa13.76□□□□□ -0.21
TRAPPC12-214ENST00000462983 NUP155O75694 1391 aa13.75□□□□□ -0.21
TRAPPC12-214ENST00000462983 NLRP1Q9C000 1473 aa13.74□□□□□ -0.21
TRAPPC12-214ENST00000462983 UGGT1Q9NYU2 1555 aa13.73□□□□□ -0.21
TRAPPC12-214ENST00000462983 MYO5BQ9ULV0 1848 aa13.73□□□□□ -0.21
TRAPPC12-214ENST00000462983 POLR1AO95602 1720 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC12-214ENST00000462983 UBR1Q8IWV7 1749 aa13.73□□□□□ -0.21
TRAPPC12-214ENST00000462983 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
TRAPPC12-214ENST00000462983 SYNMO15061 1565 aa13.72□□□□□ -0.21
TRAPPC12-214ENST00000462983 RPRD2Q5VT52 1461 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-214ENST00000462983 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
TRAPPC12-214ENST00000462983 NCKAP5LQ9HCH0 1330 aa13.69□□□□□ -0.22
TRAPPC12-214ENST00000462983 PCGF6Q9BYE7 350 aa13.69□□□□□ -0.22
TRAPPC12-214ENST00000462983 NOS1P29475 1434 aa13.69□□□□□ -0.22
TRAPPC12-214ENST00000462983 SPHKAPQ2M3C7 1700 aa13.69□□□□□ -0.22
TRAPPC12-214ENST00000462983 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
TRAPPC12-214ENST00000462983 SETD5Q9C0A6 1442 aa13.68□□□□□ -0.22
TRAPPC12-214ENST00000462983 THEMISQ8N1K5 641 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-214ENST00000462983 IDI1Q13907 227 aa13.66□□□□□ -0.22
TRAPPC12-214ENST00000462983 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
TRAPPC12-214ENST00000462983 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-214ENST00000462983 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
TRAPPC12-214ENST00000462983 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.22
TRAPPC12-214ENST00000462983 NEURL4Q96JN8 1562 aa13.64□□□□□ -0.23
TRAPPC12-214ENST00000462983 HRCP23327 699 aa13.64□□□□□ -0.23
TRAPPC12-214ENST00000462983 PKD2Q13563 968 aa13.64□□□□□ -0.23
TRAPPC12-214ENST00000462983 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
TRAPPC12-214ENST00000462983 PTPRTO14522 1441 aa13.64□□□□□ -0.23
TRAPPC12-214ENST00000462983 ANKLE2Q86XL3 938 aa13.63□□□□□ -0.23
TRAPPC12-214ENST00000462983 TMEM131LA2VDJ0 1609 aa13.62□□□□□ -0.23
TRAPPC12-214ENST00000462983 SLC4A1APQ9BWU0 796 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-214ENST00000462983 SLC52A1Q9NWF4 448 aa13.62□□□□□ -0.23
TRAPPC12-214ENST00000462983 IQGAP1P46940 1657 aa13.62□□□□□ -0.23
TRAPPC12-214ENST00000462983 KIF1BO60333 1816 aa13.62□□□□□ -0.23
TRAPPC12-214ENST00000462983 CHGAP10645 457 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-214ENST00000462983 SLIT1O75093 1534 aa13.6□□□□□ -0.23
TRAPPC12-214ENST00000462983 CLTCL1P53675 1640 aa13.59□□□□□ -0.23
TRAPPC12-214ENST00000462983 ARHGAP23Q9P227 1491 aa13.59□□□□□ -0.23
TRAPPC12-214ENST00000462983 ACIN1Q9UKV3 1341 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-214ENST00000462983 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.23
TRAPPC12-214ENST00000462983 NPHP4O75161 1426 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-214ENST00000462983 LTKP29376 864 aa13.58□□□□□ -0.24
TRAPPC12-214ENST00000462983 FOXD1Q16676 465 aa13.58□□□□□ -0.24
TRAPPC12-214ENST00000462983 TXNDC2Q86VQ3 553 aa13.58□□□□□ -0.24
TRAPPC12-214ENST00000462983 SCAF11Q99590 1463 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-214ENST00000462983 TRPM2O94759 1503 aa13.58□□□□□ -0.24
TRAPPC12-214ENST00000462983 MPHOSPH9Q99550 1183 aa13.57□□□□□ -0.24
TRAPPC12-214ENST00000462983 EID1Q9Y6B2 187 aa13.57□□□□□ -0.24
TRAPPC12-214ENST00000462983 MED14O60244 1454 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms