RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 FAM135AQ9P2D6 1515 aa18.49■□□□□ 0.55
HPS1-206ENST00000462743 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
HPS1-206ENST00000462743 EIF2AK4Q9P2K8 1649 aaKnown RBP18.49■□□□□ 0.55
HPS1-206ENST00000462743 PTPRKQ15262 1439 aa18.49■□□□□ 0.55
HPS1-206ENST00000462743 ERBINQ96RT1 1412 aa18.48■□□□□ 0.55
HPS1-206ENST00000462743 ROCK1Q13464 1354 aa18.46■□□□□ 0.55
HPS1-206ENST00000462743 C3P01024 1663 aa18.46■□□□□ 0.55
HPS1-206ENST00000462743 RNF17Q9BXT8 1623 aaKnown RBP18.45■□□□□ 0.54
HPS1-206ENST00000462743 WASHC2CQ9Y4E1 1318 aa18.44■□□□□ 0.54
HPS1-206ENST00000462743 CLTCQ00610 1675 aaKnown RBP18.44■□□□□ 0.54
HPS1-206ENST00000462743 NPATQ14207 1427 aa18.43■□□□□ 0.54
HPS1-206ENST00000462743 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
HPS1-206ENST00000462743 KDM5DQ9BY66 1539 aa18.42■□□□□ 0.54
HPS1-206ENST00000462743 LMTK3Q96Q04 1460 aa18.4■□□□□ 0.54
HPS1-206ENST00000462743 MROH1Q8NDA8 1641 aa18.4■□□□□ 0.54
HPS1-206ENST00000462743 ANKRD50Q9ULJ7 1429 aa18.4■□□□□ 0.54
HPS1-206ENST00000462743 ABCC3O15438 1527 aa18.37■□□□□ 0.53
HPS1-206ENST00000462743 DEPDC5O75140 1603 aa18.37■□□□□ 0.53
HPS1-206ENST00000462743 PREX1Q8TCU6 1659 aa18.37■□□□□ 0.53
HPS1-206ENST00000462743 PZPP20742 1482 aa18.36■□□□□ 0.53
HPS1-206ENST00000462743 ITGAEP38570 1179 aa18.36■□□□□ 0.53
HPS1-206ENST00000462743 PRDM15P57071 1507 aaPredicted RBP18.36■□□□□ 0.53
HPS1-206ENST00000462743 ZC3H13Q5T200 1668 aaKnown RBP18.35■□□□□ 0.53
HPS1-206ENST00000462743 UHRF1BP1Q6BDS2 1440 aa18.34■□□□□ 0.53
HPS1-206ENST00000462743 KANK1Q14678 1352 aa18.34■□□□□ 0.53
HPS1-206ENST00000462743 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
HPS1-206ENST00000462743 ARHGAP31Q2M1Z3 1444 aa18.33■□□□□ 0.53
HPS1-206ENST00000462743 FBXO31Q5XUX0 539 aaPredicted RBP18.33■□□□□ 0.52
HPS1-206ENST00000462743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.52
HPS1-206ENST00000462743 LMTK2Q8IWU2 1503 aa18.32■□□□□ 0.52
HPS1-206ENST00000462743 HSPA2P54652 639 aa18.3■□□□□ 0.52
HPS1-206ENST00000462743 CFAP65Q6ZU64 1925 aaKnown RBP18.29■□□□□ 0.52
HPS1-206ENST00000462743 CEP152O94986 1710 aa18.29■□□□□ 0.52
HPS1-206ENST00000462743 TNRQ92752 1358 aa18.29■□□□□ 0.52
HPS1-206ENST00000462743 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.52
HPS1-206ENST00000462743 NAIPQ13075 1403 aa18.27■□□□□ 0.52
HPS1-206ENST00000462743 UNC13BO14795 1591 aa18.25■□□□□ 0.51
HPS1-206ENST00000462743 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
HPS1-206ENST00000462743 HFM1A2PYH4 1435 aa18.24■□□□□ 0.51
HPS1-206ENST00000462743 A2ML1A8K2U0 1454 aa18.24■□□□□ 0.51
HPS1-206ENST00000462743 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
HPS1-206ENST00000462743 NLRP1Q9C000 1473 aa18.23■□□□□ 0.51
HPS1-206ENST00000462743 ZNF142P52746 1687 aaPredicted RBP18.22■□□□□ 0.51
HPS1-206ENST00000462743 MYO3AQ8NEV4 1616 aa18.22■□□□□ 0.51
HPS1-206ENST00000462743 CEP170BQ9Y4F5 1589 aaPredicted RBP18.21■□□□□ 0.51
HPS1-206ENST00000462743 NUP155O75694 1391 aa18.21■□□□□ 0.51
HPS1-206ENST00000462743 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
HPS1-206ENST00000462743 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
HPS1-206ENST00000462743 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
HPS1-206ENST00000462743 EFCAB6Q5THR3 1501 aa18.19■□□□□ 0.5
HPS1-206ENST00000462743 TET3O43151 1660 aa18.19■□□□□ 0.5
HPS1-206ENST00000462743 GCC2Q8IWJ2 1684 aa18.19■□□□□ 0.5
HPS1-206ENST00000462743 NOS1P29475 1434 aa18.19■□□□□ 0.5
HPS1-206ENST00000462743 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
HPS1-206ENST00000462743 IQGAP3Q86VI3 1631 aa18.19■□□□□ 0.5
HPS1-206ENST00000462743 PLA2R1Q13018 1463 aa18.18■□□□□ 0.5
HPS1-206ENST00000462743 PKD2Q13563 968 aa18.17■□□□□ 0.5
HPS1-206ENST00000462743 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
HPS1-206ENST00000462743 SLC52A1Q9NWF4 448 aa18.16■□□□□ 0.5
HPS1-206ENST00000462743 PTPRTO14522 1441 aa18.15■□□□□ 0.5
HPS1-206ENST00000462743 IDI1Q13907 227 aa18.14■□□□□ 0.49
HPS1-206ENST00000462743 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
HPS1-206ENST00000462743 E9PCH4 1651 aa18.11■□□□□ 0.49
HPS1-206ENST00000462743 NCKAP5LQ9HCH0 1330 aa18.1■□□□□ 0.49
HPS1-206ENST00000462743 ANKLE2Q86XL3 938 aa18.1■□□□□ 0.49
HPS1-206ENST00000462743 SYNMO15061 1565 aa18.09■□□□□ 0.49
HPS1-206ENST00000462743 KDM5AP29375 1690 aaKnown RBP18.09■□□□□ 0.49
HPS1-206ENST00000462743 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.49
HPS1-206ENST00000462743 HRCP23327 699 aa18.08■□□□□ 0.48
HPS1-206ENST00000462743 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
HPS1-206ENST00000462743 UBR1Q8IWV7 1749 aa18.08■□□□□ 0.48
HPS1-206ENST00000462743 ARHGAP23Q9P227 1491 aa18.06■□□□□ 0.48
HPS1-206ENST00000462743 MED14O60244 1454 aa18.05■□□□□ 0.48
HPS1-206ENST00000462743 PIK3C2BO00750 1634 aa18.05■□□□□ 0.48
HPS1-206ENST00000462743 SLIT1O75093 1534 aa18.04■□□□□ 0.48
HPS1-206ENST00000462743 SLC4A1APQ9BWU0 796 aaKnown RBP18.04■□□□□ 0.48
HPS1-206ENST00000462743 STAG3Q9UJ98 1225 aa18.04■□□□□ 0.48
HPS1-206ENST00000462743 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
HPS1-206ENST00000462743 POLR1AO95602 1720 aaPredicted RBP18.01■□□□□ 0.47
HPS1-206ENST00000462743 LTKP29376 864 aa18.01■□□□□ 0.47
HPS1-206ENST00000462743 TXNDC2Q86VQ3 553 aa18.01■□□□□ 0.47
HPS1-206ENST00000462743 MPHOSPH9Q99550 1183 aa18.01■□□□□ 0.47
HPS1-206ENST00000462743 NEURL4Q96JN8 1562 aa18■□□□□ 0.47
HPS1-206ENST00000462743 EID1Q9Y6B2 187 aa18■□□□□ 0.47
HPS1-206ENST00000462743 ADGRB3O60242 1522 aa17.99■□□□□ 0.47
HPS1-206ENST00000462743 HDGFP51858 240 aaKnown RBP17.99■□□□□ 0.47
HPS1-206ENST00000462743 RAB3GAP2Q9H2M9 1393 aa17.99■□□□□ 0.47
HPS1-206ENST00000462743 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
HPS1-206ENST00000462743 TMEM131LA2VDJ0 1609 aa17.98■□□□□ 0.47
HPS1-206ENST00000462743 NPHP4O75161 1426 aaPredicted RBP17.98■□□□□ 0.47
HPS1-206ENST00000462743 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
HPS1-206ENST00000462743 MYO5BQ9ULV0 1848 aa17.95■□□□□ 0.46
HPS1-206ENST00000462743 TRPM2O94759 1503 aa17.94■□□□□ 0.46
HPS1-206ENST00000462743 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.94■□□□□ 0.46
HPS1-206ENST00000462743 CERKQ8TCT0 537 aa17.94■□□□□ 0.46
HPS1-206ENST00000462743 ZFYVE9O95405 1425 aa17.94■□□□□ 0.46
HPS1-206ENST00000462743 LTBP4Q8N2S1 1624 aa17.93■□□□□ 0.46
HPS1-206ENST00000462743 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
HPS1-206ENST00000462743 RIMS2Q9UQ26 1411 aa17.91■□□□□ 0.46
HPS1-206ENST00000462743 IQGAP1P46940 1657 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms