RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 RRP7BPQ9NSQ0 103 aa28.51■■■□□ 2.15
CDKN1A-206ENST00000462537 HSPA2P54652 639 aa28.49■■■□□ 2.15
CDKN1A-206ENST00000462537 RNF17Q9BXT8 1623 aaKnown RBP28.49■■■□□ 2.15
CDKN1A-206ENST00000462537 UHRF1BP1Q6BDS2 1440 aa28.49■■■□□ 2.15
CDKN1A-206ENST00000462537 KDM5DQ9BY66 1539 aa28.48■■■□□ 2.15
CDKN1A-206ENST00000462537 SETD1BQ9UPS6 1966 aaKnown RBP28.48■■■□□ 2.15
CDKN1A-206ENST00000462537 ANKRD30AQ9BXX3 1397 aa28.48■■■□□ 2.15
CDKN1A-206ENST00000462537 FAM135AQ9P2D6 1515 aa28.47■■■□□ 2.15
CDKN1A-206ENST00000462537 WASHC2CQ9Y4E1 1318 aa28.45■■■□□ 2.15
CDKN1A-206ENST00000462537 NPATQ14207 1427 aa28.44■■■□□ 2.14
CDKN1A-206ENST00000462537 ERBINQ96RT1 1412 aa28.43■■■□□ 2.14
CDKN1A-206ENST00000462537 ADGRL2O95490 1459 aa28.4■■■□□ 2.14
CDKN1A-206ENST00000462537 ZC3H13Q5T200 1668 aaKnown RBP28.4■■■□□ 2.14
CDKN1A-206ENST00000462537 NCOA1Q15788 1441 aa28.4■■■□□ 2.14
CDKN1A-206ENST00000462537 PTPRKQ15262 1439 aa28.39■■■□□ 2.14
CDKN1A-206ENST00000462537 MROH1Q8NDA8 1641 aa28.39■■■□□ 2.13
CDKN1A-206ENST00000462537 CEP152O94986 1710 aa28.36■■■□□ 2.13
CDKN1A-206ENST00000462537 ABCC3O15438 1527 aa28.36■■■□□ 2.13
CDKN1A-206ENST00000462537 MYO3AQ8NEV4 1616 aa28.36■■■□□ 2.13
CDKN1A-206ENST00000462537 ITGAEP38570 1179 aa28.34■■■□□ 2.13
CDKN1A-206ENST00000462537 PZPP20742 1482 aa28.34■■■□□ 2.13
CDKN1A-206ENST00000462537 PRDM15P57071 1507 aaPredicted RBP28.33■■■□□ 2.13
CDKN1A-206ENST00000462537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.32■■■□□ 2.12
CDKN1A-206ENST00000462537 DEPDC5O75140 1603 aa28.32■■■□□ 2.12
CDKN1A-206ENST00000462537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.31■■■□□ 2.12
CDKN1A-206ENST00000462537 CAMSAP1Q5T5Y3 1602 aa28.3■■■□□ 2.12
CDKN1A-206ENST00000462537 ZNF142P52746 1687 aaPredicted RBP28.29■■■□□ 2.12
CDKN1A-206ENST00000462537 FBXO31Q5XUX0 539 aaPredicted RBP28.29■■■□□ 2.12
CDKN1A-206ENST00000462537 KANK1Q14678 1352 aa28.28■■■□□ 2.12
CDKN1A-206ENST00000462537 CEP170BQ9Y4F5 1589 aaPredicted RBP28.27■■■□□ 2.12
CDKN1A-206ENST00000462537 TNRQ92752 1358 aa28.26■■■□□ 2.12
CDKN1A-206ENST00000462537 RRBP1Q9P2E9 1410 aaKnown RBP28.26■■■□□ 2.11
CDKN1A-206ENST00000462537 ANKRD50Q9ULJ7 1429 aa28.26■■■□□ 2.11
CDKN1A-206ENST00000462537 STRCQ7RTU9 1775 aa28.24■■■□□ 2.11
CDKN1A-206ENST00000462537 ROCK1Q13464 1354 aa28.24■■■□□ 2.11
CDKN1A-206ENST00000462537 A2ML1A8K2U0 1454 aa28.2■■■□□ 2.1
CDKN1A-206ENST00000462537 CFAP65Q6ZU64 1925 aaKnown RBP28.2■■■□□ 2.1
CDKN1A-206ENST00000462537 ERVK-7P63135 1459 aa28.18■■■□□ 2.1
CDKN1A-206ENST00000462537 SPATA31D1Q6ZQQ2 1576 aa28.18■■■□□ 2.1
CDKN1A-206ENST00000462537 VWDEQ8N2E2 1590 aa28.17■■■□□ 2.1
CDKN1A-206ENST00000462537 DMRT2Q9Y5R5 561 aa28.15■■■□□ 2.1
CDKN1A-206ENST00000462537 LMTK2Q8IWU2 1503 aa28.14■■■□□ 2.1
CDKN1A-206ENST00000462537 ARHGAP31Q2M1Z3 1444 aa28.14■■■□□ 2.1
CDKN1A-206ENST00000462537 NLRP1Q9C000 1473 aa28.14■■■□□ 2.09
CDKN1A-206ENST00000462537 UNC13BO14795 1591 aa28.12■■■□□ 2.09
CDKN1A-206ENST00000462537 PLA2R1Q13018 1463 aa28.09■■■□□ 2.09
CDKN1A-206ENST00000462537 EFCAB6Q5THR3 1501 aa28.09■■■□□ 2.09
CDKN1A-206ENST00000462537 UGGT1Q9NYU2 1555 aa28.08■■■□□ 2.09
CDKN1A-206ENST00000462537 NCKAP5LQ9HCH0 1330 aa28.07■■■□□ 2.08
CDKN1A-206ENST00000462537 PTPRTO14522 1441 aa28.06■■■□□ 2.08
CDKN1A-206ENST00000462537 TET3O43151 1660 aa28.05■■■□□ 2.08
CDKN1A-206ENST00000462537 PKD2Q13563 968 aa28.04■■■□□ 2.08
CDKN1A-206ENST00000462537 GCC2Q8IWJ2 1684 aa28.03■■■□□ 2.08
CDKN1A-206ENST00000462537 THEMISQ8N1K5 641 aaPredicted RBP28.03■■■□□ 2.08
CDKN1A-206ENST00000462537 POLR1AO95602 1720 aaPredicted RBP28.02■■■□□ 2.08
CDKN1A-206ENST00000462537 IQGAP3Q86VI3 1631 aa28.01■■■□□ 2.07
CDKN1A-206ENST00000462537 UBR1Q8IWV7 1749 aa27.99■■■□□ 2.07
CDKN1A-206ENST00000462537 NUP155O75694 1391 aa27.99■■■□□ 2.07
CDKN1A-206ENST00000462537 RPRD2Q5VT52 1461 aaKnown RBP27.98■■■□□ 2.07
CDKN1A-206ENST00000462537 NAIPQ13075 1403 aa27.97■■■□□ 2.07
CDKN1A-206ENST00000462537 SYNMO15061 1565 aa27.97■■■□□ 2.07
CDKN1A-206ENST00000462537 PIK3C2BO00750 1634 aa27.96■■■□□ 2.07
CDKN1A-206ENST00000462537 NOS1P29475 1434 aa27.94■■■□□ 2.06
CDKN1A-206ENST00000462537 ANKLE2Q86XL3 938 aa27.94■■■□□ 2.06
CDKN1A-206ENST00000462537 E9PCH4 1651 aa27.94■■■□□ 2.06
CDKN1A-206ENST00000462537 NEURL4Q96JN8 1562 aa27.92■■■□□ 2.06
CDKN1A-206ENST00000462537 STAG3Q9UJ98 1225 aa27.92■■■□□ 2.06
CDKN1A-206ENST00000462537 HFM1A2PYH4 1435 aa27.92■■■□□ 2.06
CDKN1A-206ENST00000462537 IDI1Q13907 227 aa27.88■■■□□ 2.05
CDKN1A-206ENST00000462537 KDM5AP29375 1690 aaKnown RBP27.87■■■□□ 2.05
CDKN1A-206ENST00000462537 ILDR1Q86SU0 546 aaPredicted RBP27.86■■■□□ 2.05
CDKN1A-206ENST00000462537 CERKQ8TCT0 537 aa27.86■■■□□ 2.05
CDKN1A-206ENST00000462537 SLC52A1Q9NWF4 448 aa27.85■■■□□ 2.05
CDKN1A-206ENST00000462537 ADGRB3O60242 1522 aa27.84■■■□□ 2.05
CDKN1A-206ENST00000462537 NPHP4O75161 1426 aaPredicted RBP27.84■■■□□ 2.05
CDKN1A-206ENST00000462537 IQGAP1P46940 1657 aa27.83■■■□□ 2.05
CDKN1A-206ENST00000462537 SLIT1O75093 1534 aa27.82■■■□□ 2.04
CDKN1A-206ENST00000462537 TRIM52Q96A61 297 aa27.82■■■□□ 2.04
CDKN1A-206ENST00000462537 MED14O60244 1454 aa27.82■■■□□ 2.04
CDKN1A-206ENST00000462537 ZNF335Q9H4Z2 1342 aaPredicted RBP27.81■■■□□ 2.04
CDKN1A-206ENST00000462537 SCAF11Q99590 1463 aaKnown RBP27.81■■■□□ 2.04
CDKN1A-206ENST00000462537 ARHGAP23Q9P227 1491 aa27.81■■■□□ 2.04
CDKN1A-206ENST00000462537 LTBP4Q8N2S1 1624 aa27.81■■■□□ 2.04
CDKN1A-206ENST00000462537 FBXO41Q8TF61 875 aa27.79■■■□□ 2.04
CDKN1A-206ENST00000462537 EID1Q9Y6B2 187 aa27.79■■■□□ 2.04
CDKN1A-206ENST00000462537 TMEM2Q9UHN6 1383 aa27.78■■■□□ 2.04
CDKN1A-206ENST00000462537 TXNDC2Q86VQ3 553 aa27.78■■■□□ 2.04
CDKN1A-206ENST00000462537 MYO5BQ9ULV0 1848 aa27.77■■■□□ 2.04
CDKN1A-206ENST00000462537 SPHKAPQ2M3C7 1700 aa27.77■■■□□ 2.04
CDKN1A-206ENST00000462537 LTKP29376 864 aa27.75■■■□□ 2.03
CDKN1A-206ENST00000462537 CHGAP10645 457 aaKnown RBP27.74■■■□□ 2.03
CDKN1A-206ENST00000462537 TMEM131LA2VDJ0 1609 aa27.73■■■□□ 2.03
CDKN1A-206ENST00000462537 SLC4A1APQ9BWU0 796 aaKnown RBP27.68■■■□□ 2.02
CDKN1A-206ENST00000462537 SETD5Q9C0A6 1442 aa27.65■■■□□ 2.02
CDKN1A-206ENST00000462537 RIMS2Q9UQ26 1411 aa27.65■■■□□ 2.02
CDKN1A-206ENST00000462537 IQSEC2Q5JU85 1478 aa27.64■■■□□ 2.02
CDKN1A-206ENST00000462537 TRPM2O94759 1503 aa27.64■■■□□ 2.02
CDKN1A-206ENST00000462537 CPS1P31327 1500 aa27.64■■■□□ 2.02
CDKN1A-206ENST00000462537 ZFYVE9O95405 1425 aa27.62■■■□□ 2.01
CDKN1A-206ENST00000462537 PPP1R15AO75807 674 aaPredicted RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms