RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 ATP7AQ04656 1500 aa16.77■□□□□ 0.28
TNRC6A-204ENST00000462400 UNC13BO14795 1591 aa16.76■□□□□ 0.27
TNRC6A-204ENST00000462400 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
TNRC6A-204ENST00000462400 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
TNRC6A-204ENST00000462400 ERBINQ96RT1 1412 aa16.75■□□□□ 0.27
TNRC6A-204ENST00000462400 INO80Q9ULG1 1556 aaPredicted RBP16.75■□□□□ 0.27
TNRC6A-204ENST00000462400 RAPGEF3O95398 923 aa16.75■□□□□ 0.27
TNRC6A-204ENST00000462400 ZNF326Q5BKZ1 582 aaKnown RBP16.75■□□□□ 0.27
TNRC6A-204ENST00000462400 RTEL1-TNFRSF6BF6WH68 1400 aa16.74■□□□□ 0.27
TNRC6A-204ENST00000462400 NEFLP07196 543 aa16.74■□□□□ 0.27
TNRC6A-204ENST00000462400 FAM69CQ0P6D2 419 aa16.74■□□□□ 0.27
TNRC6A-204ENST00000462400 KIF3BO15066 747 aa16.72■□□□□ 0.27
TNRC6A-204ENST00000462400 KIDINS220Q9ULH0 1771 aa16.72■□□□□ 0.27
TNRC6A-204ENST00000462400 IQGAP3Q86VI3 1631 aa16.71■□□□□ 0.26
TNRC6A-204ENST00000462400 ZNF518AQ6AHZ1 1483 aa16.7■□□□□ 0.26
TNRC6A-204ENST00000462400 TSPOAP1O95153 1857 aa16.7■□□□□ 0.26
TNRC6A-204ENST00000462400 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
TNRC6A-204ENST00000462400 DDX10Q13206 875 aaKnown RBP16.69■□□□□ 0.26
TNRC6A-204ENST00000462400 ERICH6Q7L0X2 663 aa16.69■□□□□ 0.26
TNRC6A-204ENST00000462400 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
TNRC6A-204ENST00000462400 CFAP74Q9C0B2 1584 aa16.69■□□□□ 0.26
TNRC6A-204ENST00000462400 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
TNRC6A-204ENST00000462400 MAP3K4Q9Y6R4 1608 aa16.68■□□□□ 0.26
TNRC6A-204ENST00000462400 MAGI2Q86UL8 1455 aa16.68■□□□□ 0.26
TNRC6A-204ENST00000462400 PLA2R1Q13018 1463 aa16.68■□□□□ 0.26
TNRC6A-204ENST00000462400 RGL3Q3MIN7 710 aa16.67■□□□□ 0.26
TNRC6A-204ENST00000462400 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
TNRC6A-204ENST00000462400 DIP2BQ9P265 1576 aa16.66■□□□□ 0.26
TNRC6A-204ENST00000462400 DHX29Q7Z478 1369 aaKnown RBP16.66■□□□□ 0.26
TNRC6A-204ENST00000462400 CCDC144AA2RUR9 1427 aa16.64■□□□□ 0.25
TNRC6A-204ENST00000462400 KDM5CP41229 1560 aa16.64■□□□□ 0.25
TNRC6A-204ENST00000462400 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
TNRC6A-204ENST00000462400 NEO1Q92859 1461 aa16.64■□□□□ 0.25
TNRC6A-204ENST00000462400 MSH5O43196 834 aa16.63■□□□□ 0.25
TNRC6A-204ENST00000462400 HECW2Q9P2P5 1572 aa16.63■□□□□ 0.25
TNRC6A-204ENST00000462400 E9PCH4 1651 aa16.62■□□□□ 0.25
TNRC6A-204ENST00000462400 DEPDC5O75140 1603 aa16.62■□□□□ 0.25
TNRC6A-204ENST00000462400 ABCA6Q8N139 1617 aa16.62■□□□□ 0.25
TNRC6A-204ENST00000462400 A2MP01023 1474 aa16.62■□□□□ 0.25
TNRC6A-204ENST00000462400 GLI2P10070 1586 aa16.61■□□□□ 0.25
TNRC6A-204ENST00000462400 GGT6Q6P531 493 aa16.61■□□□□ 0.25
TNRC6A-204ENST00000462400 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
TNRC6A-204ENST00000462400 MROH1Q8NDA8 1641 aa16.6■□□□□ 0.25
TNRC6A-204ENST00000462400 FRMPD1Q5SYB0 1578 aa16.6■□□□□ 0.25
TNRC6A-204ENST00000462400 MLH3Q9UHC1 1453 aa16.59■□□□□ 0.25
TNRC6A-204ENST00000462400 RICTORQ6R327 1708 aa16.59■□□□□ 0.25
TNRC6A-204ENST00000462400 KANK1Q14678 1352 aa16.58■□□□□ 0.25
TNRC6A-204ENST00000462400 YEATS2Q9ULM3 1422 aa16.58■□□□□ 0.25
TNRC6A-204ENST00000462400 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
TNRC6A-204ENST00000462400 PPRC1Q5VV67 1664 aaKnown RBP16.57■□□□□ 0.24
TNRC6A-204ENST00000462400 EIF2AK4Q9P2K8 1649 aaKnown RBP16.57■□□□□ 0.24
TNRC6A-204ENST00000462400 ATP10AO60312 1499 aa16.56■□□□□ 0.24
TNRC6A-204ENST00000462400 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
TNRC6A-204ENST00000462400 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
TNRC6A-204ENST00000462400 CEP152O94986 1710 aa16.55■□□□□ 0.24
TNRC6A-204ENST00000462400 C11orf95C9JLR9 678 aaPredicted RBP16.55■□□□□ 0.24
TNRC6A-204ENST00000462400 VWDEQ8N2E2 1590 aa16.55■□□□□ 0.24
TNRC6A-204ENST00000462400 TET3O43151 1660 aa16.55■□□□□ 0.24
TNRC6A-204ENST00000462400 CFAP65Q6ZU64 1925 aaKnown RBP16.55■□□□□ 0.24
TNRC6A-204ENST00000462400 DIP2CQ9Y2E4 1556 aa16.54■□□□□ 0.24
TNRC6A-204ENST00000462400 KIF13AQ9H1H9 1805 aa16.54■□□□□ 0.24
TNRC6A-204ENST00000462400 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
TNRC6A-204ENST00000462400 UGGT1Q9NYU2 1555 aa16.53■□□□□ 0.24
TNRC6A-204ENST00000462400 SPHKAPQ2M3C7 1700 aa16.52■□□□□ 0.24
TNRC6A-204ENST00000462400 CCER2I3L3R5 266 aa16.52■□□□□ 0.24
TNRC6A-204ENST00000462400 ANP32CO43423 234 aa16.52■□□□□ 0.24
TNRC6A-204ENST00000462400 CLTCL1P53675 1640 aa16.51■□□□□ 0.23
TNRC6A-204ENST00000462400 UHRF1BP1Q6BDS2 1440 aa16.51■□□□□ 0.23
TNRC6A-204ENST00000462400 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
TNRC6A-204ENST00000462400 USP47Q96K76 1375 aa16.5■□□□□ 0.23
TNRC6A-204ENST00000462400 RNF17Q9BXT8 1623 aaKnown RBP16.5■□□□□ 0.23
TNRC6A-204ENST00000462400 TRPM2O94759 1503 aa16.49■□□□□ 0.23
TNRC6A-204ENST00000462400 FANCIQ9NVI1 1328 aa16.49■□□□□ 0.23
TNRC6A-204ENST00000462400 SPATA31E1Q6ZUB1 1445 aa16.49■□□□□ 0.23
TNRC6A-204ENST00000462400 NBPF1Q3BBV0 1214 aa16.49■□□□□ 0.23
TNRC6A-204ENST00000462400 WASHC2CQ9Y4E1 1318 aa16.49■□□□□ 0.23
TNRC6A-204ENST00000462400 POLR3GLQ9BT43 218 aa16.48■□□□□ 0.23
TNRC6A-204ENST00000462400 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
TNRC6A-204ENST00000462400 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
TNRC6A-204ENST00000462400 PTPRTO14522 1441 aa16.48■□□□□ 0.23
TNRC6A-204ENST00000462400 PRAG1Q86YV5 1406 aa16.47■□□□□ 0.23
TNRC6A-204ENST00000462400 COL17A1Q9UMD9 1497 aaPredicted RBP16.47■□□□□ 0.23
TNRC6A-204ENST00000462400 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
TNRC6A-204ENST00000462400 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
TNRC6A-204ENST00000462400 NPATQ14207 1427 aa16.44■□□□□ 0.22
TNRC6A-204ENST00000462400 BCORL1Q5H9F3 1711 aa16.44■□□□□ 0.22
TNRC6A-204ENST00000462400 IRX6P78412 446 aaPredicted RBP16.44■□□□□ 0.22
TNRC6A-204ENST00000462400 CCDC7Q96M83 1385 aa16.44■□□□□ 0.22
TNRC6A-204ENST00000462400 ABCC3O15438 1527 aa16.43■□□□□ 0.22
TNRC6A-204ENST00000462400 TRPM1Q7Z4N2 1603 aa16.43■□□□□ 0.22
TNRC6A-204ENST00000462400 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
TNRC6A-204ENST00000462400 ST20-MTHFSA0A0A6YYL1 179 aa16.42■□□□□ 0.22
TNRC6A-204ENST00000462400 MLECQ14165 292 aa16.42■□□□□ 0.22
TNRC6A-204ENST00000462400 LMTK2Q8IWU2 1503 aa16.42■□□□□ 0.22
TNRC6A-204ENST00000462400 ZMYM4Q5VZL5 1548 aa16.41■□□□□ 0.22
TNRC6A-204ENST00000462400 SIGLEC1Q9BZZ2 1709 aa16.4■□□□□ 0.22
TNRC6A-204ENST00000462400 CAMSAP1Q5T5Y3 1602 aa16.39■□□□□ 0.22
TNRC6A-204ENST00000462400 CNGB1Q14028 1251 aaPredicted RBP16.39■□□□□ 0.21
TNRC6A-204ENST00000462400 MROH2AA6NES4 1674 aa16.39■□□□□ 0.21
TNRC6A-204ENST00000462400 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms