RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 MROH2AA6NES4 1674 aa24.33■■□□□ 1.49
ERCC3-206ENST00000462306 EIF2AK4Q9P2K8 1649 aaKnown RBP24.32■■□□□ 1.48
ERCC3-206ENST00000462306 ZMYM3Q14202 1370 aa24.32■■□□□ 1.48
ERCC3-206ENST00000462306 CLTCQ00610 1675 aaKnown RBP24.32■■□□□ 1.48
ERCC3-206ENST00000462306 RRBP1Q9P2E9 1410 aaKnown RBP24.31■■□□□ 1.48
ERCC3-206ENST00000462306 RNF17Q9BXT8 1623 aaKnown RBP24.31■■□□□ 1.48
ERCC3-206ENST00000462306 ERBINQ96RT1 1412 aa24.3■■□□□ 1.48
ERCC3-206ENST00000462306 LMTK3Q96Q04 1460 aa24.29■■□□□ 1.48
ERCC3-206ENST00000462306 FAM135AQ9P2D6 1515 aa24.28■■□□□ 1.48
ERCC3-206ENST00000462306 KDM5DQ9BY66 1539 aa24.26■■□□□ 1.47
ERCC3-206ENST00000462306 MROH1Q8NDA8 1641 aa24.26■■□□□ 1.47
ERCC3-206ENST00000462306 WASHC2CQ9Y4E1 1318 aa24.25■■□□□ 1.47
ERCC3-206ENST00000462306 NPATQ14207 1427 aa24.22■■□□□ 1.47
ERCC3-206ENST00000462306 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
ERCC3-206ENST00000462306 SETD1BQ9UPS6 1966 aaKnown RBP24.22■■□□□ 1.47
ERCC3-206ENST00000462306 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
ERCC3-206ENST00000462306 ITGAEP38570 1179 aa24.21■■□□□ 1.47
ERCC3-206ENST00000462306 ABCC3O15438 1527 aa24.2■■□□□ 1.46
ERCC3-206ENST00000462306 PRDM15P57071 1507 aaPredicted RBP24.19■■□□□ 1.46
ERCC3-206ENST00000462306 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
ERCC3-206ENST00000462306 DEPDC5O75140 1603 aa24.18■■□□□ 1.46
ERCC3-206ENST00000462306 ZC3H13Q5T200 1668 aaKnown RBP24.17■■□□□ 1.46
ERCC3-206ENST00000462306 UHRF1BP1Q6BDS2 1440 aa24.17■■□□□ 1.46
ERCC3-206ENST00000462306 PZPP20742 1482 aa24.16■■□□□ 1.46
ERCC3-206ENST00000462306 HSPA2P54652 639 aa24.16■■□□□ 1.46
ERCC3-206ENST00000462306 FBXO31Q5XUX0 539 aaPredicted RBP24.13■■□□□ 1.45
ERCC3-206ENST00000462306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.13■■□□□ 1.452e-7■■■□□ 18.9
ERCC3-206ENST00000462306 CEP152O94986 1710 aa24.12■■□□□ 1.45
ERCC3-206ENST00000462306 VWDEQ8N2E2 1590 aa24.12■■□□□ 1.45
ERCC3-206ENST00000462306 CAMSAP1Q5T5Y3 1602 aa24.1■■□□□ 1.45
ERCC3-206ENST00000462306 KANK1Q14678 1352 aa24.09■■□□□ 1.45
ERCC3-206ENST00000462306 LMTK2Q8IWU2 1503 aa24.07■■□□□ 1.44
ERCC3-206ENST00000462306 MYO3AQ8NEV4 1616 aa24.06■■□□□ 1.44
ERCC3-206ENST00000462306 TNRQ92752 1358 aa24.06■■□□□ 1.44
ERCC3-206ENST00000462306 ARHGAP31Q2M1Z3 1444 aa24.06■■□□□ 1.44
ERCC3-206ENST00000462306 UNC13BO14795 1591 aa24.03■■□□□ 1.44
ERCC3-206ENST00000462306 SPATA31D1Q6ZQQ2 1576 aa24.03■■□□□ 1.44
ERCC3-206ENST00000462306 ZNF142P52746 1687 aaPredicted RBP24.03■■□□□ 1.44
ERCC3-206ENST00000462306 ERVK-7P63135 1459 aa24.02■■□□□ 1.44
ERCC3-206ENST00000462306 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
ERCC3-206ENST00000462306 NAIPQ13075 1403 aa24.01■■□□□ 1.43
ERCC3-206ENST00000462306 A2ML1A8K2U0 1454 aa24■■□□□ 1.43
ERCC3-206ENST00000462306 NLRP1Q9C000 1473 aa23.98■■□□□ 1.43
ERCC3-206ENST00000462306 EFCAB6Q5THR3 1501 aa23.98■■□□□ 1.43
ERCC3-206ENST00000462306 HFM1A2PYH4 1435 aa23.97■■□□□ 1.43
ERCC3-206ENST00000462306 STRCQ7RTU9 1775 aa23.96■■□□□ 1.43
ERCC3-206ENST00000462306 GCC2Q8IWJ2 1684 aa23.96■■□□□ 1.43
ERCC3-206ENST00000462306 CFAP65Q6ZU64 1925 aaKnown RBP23.96■■□□□ 1.43
ERCC3-206ENST00000462306 NUP155O75694 1391 aa23.93■■□□□ 1.42
ERCC3-206ENST00000462306 TET3O43151 1660 aa23.93■■□□□ 1.42
ERCC3-206ENST00000462306 IQGAP3Q86VI3 1631 aa23.93■■□□□ 1.42
ERCC3-206ENST00000462306 PLA2R1Q13018 1463 aa23.91■■□□□ 1.42
ERCC3-206ENST00000462306 RPRD2Q5VT52 1461 aaKnown RBP23.9■■□□□ 1.42
ERCC3-206ENST00000462306 NOS1P29475 1434 aa23.9■■□□□ 1.42
ERCC3-206ENST00000462306 UGGT1Q9NYU2 1555 aa23.89■■□□□ 1.41
ERCC3-206ENST00000462306 SYNMO15061 1565 aa23.86■■□□□ 1.41
ERCC3-206ENST00000462306 THEMISQ8N1K5 641 aaPredicted RBP23.86■■□□□ 1.41
ERCC3-206ENST00000462306 DMRT2Q9Y5R5 561 aa23.86■■□□□ 1.41
ERCC3-206ENST00000462306 NCKAP5LQ9HCH0 1330 aa23.85■■□□□ 1.41
ERCC3-206ENST00000462306 E9PCH4 1651 aa23.85■■□□□ 1.41
ERCC3-206ENST00000462306 PTPRTO14522 1441 aa23.84■■□□□ 1.41
ERCC3-206ENST00000462306 PKD2Q13563 968 aa23.84■■□□□ 1.41
ERCC3-206ENST00000462306 IDI1Q13907 227 aa23.82■■□□□ 1.4
ERCC3-206ENST00000462306 UBR1Q8IWV7 1749 aa23.81■■□□□ 1.4
ERCC3-206ENST00000462306 PIK3C2BO00750 1634 aa23.81■■□□□ 1.4
ERCC3-206ENST00000462306 SLC52A1Q9NWF4 448 aa23.79■■□□□ 1.4
ERCC3-206ENST00000462306 ANKLE2Q86XL3 938 aa23.77■■□□□ 1.4
ERCC3-206ENST00000462306 TRIM52Q96A61 297 aa23.77■■□□□ 1.4
ERCC3-206ENST00000462306 NEURL4Q96JN8 1562 aa23.75■■□□□ 1.39
ERCC3-206ENST00000462306 KDM5AP29375 1690 aaKnown RBP23.75■■□□□ 1.39
ERCC3-206ENST00000462306 SETD5Q9C0A6 1442 aa23.75■■□□□ 1.39
ERCC3-206ENST00000462306 ARHGAP23Q9P227 1491 aa23.75■■□□□ 1.39
ERCC3-206ENST00000462306 POLR1AO95602 1720 aaPredicted RBP23.74■■□□□ 1.39
ERCC3-206ENST00000462306 SLIT1O75093 1534 aa23.73■■□□□ 1.39
ERCC3-206ENST00000462306 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
ERCC3-206ENST00000462306 ADGRB3O60242 1522 aa23.72■■□□□ 1.39
ERCC3-206ENST00000462306 MED14O60244 1454 aa23.71■■□□□ 1.39
ERCC3-206ENST00000462306 TMEM2Q9UHN6 1383 aa23.7■■□□□ 1.38
ERCC3-206ENST00000462306 LTKP29376 864 aa23.69■■□□□ 1.38
ERCC3-206ENST00000462306 SLC4A1APQ9BWU0 796 aaKnown RBP23.69■■□□□ 1.38
ERCC3-206ENST00000462306 NPHP4O75161 1426 aaPredicted RBP23.67■■□□□ 1.38
ERCC3-206ENST00000462306 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
ERCC3-206ENST00000462306 SCAF11Q99590 1463 aaKnown RBP23.67■■□□□ 1.38
ERCC3-206ENST00000462306 TMEM131LA2VDJ0 1609 aa23.66■■□□□ 1.38
ERCC3-206ENST00000462306 RAB3GAP2Q9H2M9 1393 aa23.66■■□□□ 1.38
ERCC3-206ENST00000462306 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
ERCC3-206ENST00000462306 ACIN1Q9UKV3 1341 aaKnown RBP23.64■■□□□ 1.38
ERCC3-206ENST00000462306 EID1Q9Y6B2 187 aa23.63■■□□□ 1.37
ERCC3-206ENST00000462306 IQGAP1P46940 1657 aa23.63■■□□□ 1.37
ERCC3-206ENST00000462306 TRPM2O94759 1503 aa23.63■■□□□ 1.37
ERCC3-206ENST00000462306 LTBP4Q8N2S1 1624 aa23.62■■□□□ 1.37
ERCC3-206ENST00000462306 MYO5BQ9ULV0 1848 aa23.62■■□□□ 1.37
ERCC3-206ENST00000462306 MPHOSPH9Q99550 1183 aa23.62■■□□□ 1.37
ERCC3-206ENST00000462306 ZNF335Q9H4Z2 1342 aaPredicted RBP23.61■■□□□ 1.37
ERCC3-206ENST00000462306 ZFYVE9O95405 1425 aa23.6■■□□□ 1.37
ERCC3-206ENST00000462306 CHGAP10645 457 aaKnown RBP23.6■■□□□ 1.37
ERCC3-206ENST00000462306 CERKQ8TCT0 537 aa23.6■■□□□ 1.37
ERCC3-206ENST00000462306 FOXD1Q16676 465 aa23.59■■□□□ 1.37
ERCC3-206ENST00000462306 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
ERCC3-206ENST00000462306 HRCP23327 699 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms