RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 ZMYM3Q14202 1370 aa13.71□□□□□ -0.21
SYN3-207ENST00000462268 HSPA2P54652 639 aa13.71□□□□□ -0.21
SYN3-207ENST00000462268 MAST1Q9Y2H9 1570 aa13.71□□□□□ -0.22
SYN3-207ENST00000462268 KIF3BO15066 747 aa13.7□□□□□ -0.22
SYN3-207ENST00000462268 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
SYN3-207ENST00000462268 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
SYN3-207ENST00000462268 SHANK2Q9UPX8 1470 aa13.69□□□□□ -0.22
SYN3-207ENST00000462268 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
SYN3-207ENST00000462268 PREX1Q8TCU6 1659 aa13.69□□□□□ -0.22
SYN3-207ENST00000462268 TCOF1Q13428 1488 aaKnown RBP13.68□□□□□ -0.22
SYN3-207ENST00000462268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYN3-207ENST00000462268 C3P01024 1663 aa13.68□□□□□ -0.22
SYN3-207ENST00000462268 PTPN23Q9H3S7 1636 aa13.68□□□□□ -0.22
SYN3-207ENST00000462268 ABCC5O15440 1437 aa13.66□□□□□ -0.22
SYN3-207ENST00000462268 KDM5DQ9BY66 1539 aa13.66□□□□□ -0.22
SYN3-207ENST00000462268 DAPK1P53355 1430 aa13.65□□□□□ -0.22
SYN3-207ENST00000462268 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
SYN3-207ENST00000462268 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
SYN3-207ENST00000462268 PTPRKQ15262 1439 aa13.64□□□□□ -0.23
SYN3-207ENST00000462268 DUOX2Q9NRD8 1548 aa13.64□□□□□ -0.23
SYN3-207ENST00000462268 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
SYN3-207ENST00000462268 ERBINQ96RT1 1412 aa13.62□□□□□ -0.23
SYN3-207ENST00000462268 PZPP20742 1482 aa13.61□□□□□ -0.23
SYN3-207ENST00000462268 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
SYN3-207ENST00000462268 EIF2AK4Q9P2K8 1649 aaKnown RBP13.61□□□□□ -0.23
SYN3-207ENST00000462268 ANKRD30AQ9BXX3 1397 aa13.61□□□□□ -0.23
SYN3-207ENST00000462268 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
SYN3-207ENST00000462268 FAM50AQ14320 339 aaKnown RBP13.6□□□□□ -0.23
SYN3-207ENST00000462268 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
SYN3-207ENST00000462268 RNF17Q9BXT8 1623 aaKnown RBP13.6□□□□□ -0.23
SYN3-207ENST00000462268 NCOA1Q15788 1441 aa13.59□□□□□ -0.23
SYN3-207ENST00000462268 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
SYN3-207ENST00000462268 TNRQ92752 1358 aa13.58□□□□□ -0.23
SYN3-207ENST00000462268 ABCC3O15438 1527 aa13.58□□□□□ -0.24
SYN3-207ENST00000462268 ADGRL2O95490 1459 aa13.57□□□□□ -0.24
SYN3-207ENST00000462268 CHIC2Q9UKJ5 165 aa13.57□□□□□ -0.24
SYN3-207ENST00000462268 CEP170BQ9Y4F5 1589 aaPredicted RBP13.57□□□□□ -0.24
SYN3-207ENST00000462268 MYO3AQ8NEV4 1616 aa13.57□□□□□ -0.24
SYN3-207ENST00000462268 PTPRTO14522 1441 aa13.56□□□□□ -0.24
SYN3-207ENST00000462268 A2ML1A8K2U0 1454 aa13.56□□□□□ -0.24
SYN3-207ENST00000462268 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
SYN3-207ENST00000462268 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
SYN3-207ENST00000462268 PRDM15P57071 1507 aaPredicted RBP13.55□□□□□ -0.24
SYN3-207ENST00000462268 FBXO31Q5XUX0 539 aaPredicted RBP13.55□□□□□ -0.24
SYN3-207ENST00000462268 ILDR1Q86SU0 546 aaPredicted RBP13.55□□□□□ -0.24
SYN3-207ENST00000462268 KANK1Q14678 1352 aa13.55□□□□□ -0.24
SYN3-207ENST00000462268 CAMSAP1Q5T5Y3 1602 aa13.54□□□□□ -0.24
SYN3-207ENST00000462268 MROH1Q8NDA8 1641 aa13.54□□□□□ -0.24
SYN3-207ENST00000462268 ZNF142P52746 1687 aaPredicted RBP13.54□□□□□ -0.24
SYN3-207ENST00000462268 PKD2Q13563 968 aa13.54□□□□□ -0.24
SYN3-207ENST00000462268 NLRP1Q9C000 1473 aa13.54□□□□□ -0.24
SYN3-207ENST00000462268 FBXO41Q8TF61 875 aa13.52□□□□□ -0.25
SYN3-207ENST00000462268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.253e-8■■■■■ 139.7
SYN3-207ENST00000462268 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.25
SYN3-207ENST00000462268 ERVK-7P63135 1459 aa13.51□□□□□ -0.25
SYN3-207ENST00000462268 STRCQ7RTU9 1775 aa13.5□□□□□ -0.25
SYN3-207ENST00000462268 SPATA31D1Q6ZQQ2 1576 aa13.5□□□□□ -0.25
SYN3-207ENST00000462268 ANKRD50Q9ULJ7 1429 aa13.5□□□□□ -0.25
SYN3-207ENST00000462268 ROCK1Q13464 1354 aa13.5□□□□□ -0.25
SYN3-207ENST00000462268 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
SYN3-207ENST00000462268 CERKQ8TCT0 537 aa13.49□□□□□ -0.25
SYN3-207ENST00000462268 DEPDC5O75140 1603 aa13.49□□□□□ -0.25
SYN3-207ENST00000462268 LMTK2Q8IWU2 1503 aa13.49□□□□□ -0.25
SYN3-207ENST00000462268 NCKAP5LQ9HCH0 1330 aa13.48□□□□□ -0.25
SYN3-207ENST00000462268 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
SYN3-207ENST00000462268 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
SYN3-207ENST00000462268 UGGT1Q9NYU2 1555 aa13.47□□□□□ -0.25
SYN3-207ENST00000462268 VWDEQ8N2E2 1590 aa13.46□□□□□ -0.25
SYN3-207ENST00000462268 ANKLE2Q86XL3 938 aa13.45□□□□□ -0.26
SYN3-207ENST00000462268 CEP152O94986 1710 aa13.44□□□□□ -0.26
SYN3-207ENST00000462268 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
SYN3-207ENST00000462268 ITGAEP38570 1179 aa13.43□□□□□ -0.26
SYN3-207ENST00000462268 EFCAB6Q5THR3 1501 aa13.43□□□□□ -0.26
SYN3-207ENST00000462268 RPRD2Q5VT52 1461 aaKnown RBP13.41□□□□□ -0.26
SYN3-207ENST00000462268 LTBP4Q8N2S1 1624 aa13.4□□□□□ -0.26
SYN3-207ENST00000462268 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.26
SYN3-207ENST00000462268 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
SYN3-207ENST00000462268 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
SYN3-207ENST00000462268 NOS1P29475 1434 aa13.39□□□□□ -0.27
SYN3-207ENST00000462268 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
SYN3-207ENST00000462268 MED14O60244 1454 aa13.39□□□□□ -0.27
SYN3-207ENST00000462268 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
SYN3-207ENST00000462268 UNC13BO14795 1591 aa13.38□□□□□ -0.27
SYN3-207ENST00000462268 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
SYN3-207ENST00000462268 SCAF11Q99590 1463 aaKnown RBP13.36□□□□□ -0.27
SYN3-207ENST00000462268 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
SYN3-207ENST00000462268 SLIT1O75093 1534 aa13.36□□□□□ -0.27
SYN3-207ENST00000462268 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
SYN3-207ENST00000462268 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
SYN3-207ENST00000462268 NUP155O75694 1391 aa13.35□□□□□ -0.27
SYN3-207ENST00000462268 TMEM2Q9UHN6 1383 aa13.35□□□□□ -0.27
SYN3-207ENST00000462268 IDI1Q13907 227 aa13.35□□□□□ -0.27
SYN3-207ENST00000462268 TET3O43151 1660 aa13.34□□□□□ -0.27
SYN3-207ENST00000462268 SYNMO15061 1565 aa13.34□□□□□ -0.27
SYN3-207ENST00000462268 TXNDC2Q86VQ3 553 aa13.34□□□□□ -0.27
SYN3-207ENST00000462268 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
SYN3-207ENST00000462268 CPS1P31327 1500 aa13.34□□□□□ -0.27
SYN3-207ENST00000462268 UBR1Q8IWV7 1749 aa13.33□□□□□ -0.27
SYN3-207ENST00000462268 ADGRB3O60242 1522 aa13.33□□□□□ -0.28
SYN3-207ENST00000462268 PIK3C2BO00750 1634 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms