RNA–Protein interactions for RNA: ENST00000461682.1

NDUFB4-202, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 3

Gene NDUFB4, Length 821 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-202ENST00000461682 LMTK3Q96Q04 1460 aa23.48■■□□□ 1.35
NDUFB4-202ENST00000461682 FAM135AQ9P2D6 1515 aa23.47■■□□□ 1.35
NDUFB4-202ENST00000461682 RNF17Q9BXT8 1623 aaKnown RBP23.45■■□□□ 1.34
NDUFB4-202ENST00000461682 ERBINQ96RT1 1412 aa23.45■■□□□ 1.34
NDUFB4-202ENST00000461682 PREX1Q8TCU6 1659 aa23.44■■□□□ 1.34
NDUFB4-202ENST00000461682 KDM5DQ9BY66 1539 aa23.44■■□□□ 1.34
NDUFB4-202ENST00000461682 ADGRL2O95490 1459 aa23.44■■□□□ 1.34
NDUFB4-202ENST00000461682 NCOA1Q15788 1441 aa23.43■■□□□ 1.34
NDUFB4-202ENST00000461682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.43■■□□□ 1.34
NDUFB4-202ENST00000461682 WASHC2CQ9Y4E1 1318 aa23.42■■□□□ 1.34
NDUFB4-202ENST00000461682 NPATQ14207 1427 aa23.42■■□□□ 1.34
NDUFB4-202ENST00000461682 SETD1BQ9UPS6 1966 aaKnown RBP23.41■■□□□ 1.34
NDUFB4-202ENST00000461682 UHRF1BP1Q6BDS2 1440 aa23.41■■□□□ 1.34
NDUFB4-202ENST00000461682 PTPRKQ15262 1439 aa23.37■■□□□ 1.33
NDUFB4-202ENST00000461682 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
NDUFB4-202ENST00000461682 ZC3H13Q5T200 1668 aaKnown RBP23.37■■□□□ 1.33
NDUFB4-202ENST00000461682 MROH1Q8NDA8 1641 aa23.37■■□□□ 1.33
NDUFB4-202ENST00000461682 ABCC3O15438 1527 aa23.35■■□□□ 1.33
NDUFB4-202ENST00000461682 ITGAEP38570 1179 aa23.35■■□□□ 1.33
NDUFB4-202ENST00000461682 HSPA2P54652 639 aa23.35■■□□□ 1.33
NDUFB4-202ENST00000461682 ROCK1Q13464 1354 aa23.34■■□□□ 1.33
NDUFB4-202ENST00000461682 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.33
NDUFB4-202ENST00000461682 PZPP20742 1482 aa23.33■■□□□ 1.33
NDUFB4-202ENST00000461682 DEPDC5O75140 1603 aa23.32■■□□□ 1.32
NDUFB4-202ENST00000461682 ANKRD50Q9ULJ7 1429 aa23.32■■□□□ 1.32
NDUFB4-202ENST00000461682 KANK1Q14678 1352 aa23.3■■□□□ 1.32
NDUFB4-202ENST00000461682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.322e-6■□□□□ 10.2
NDUFB4-202ENST00000461682 CEP152O94986 1710 aa23.29■■□□□ 1.32
NDUFB4-202ENST00000461682 MYO3AQ8NEV4 1616 aa23.28■■□□□ 1.32
NDUFB4-202ENST00000461682 FBXO31Q5XUX0 539 aaPredicted RBP23.27■■□□□ 1.32
NDUFB4-202ENST00000461682 CAMSAP1Q5T5Y3 1602 aa23.26■■□□□ 1.31
NDUFB4-202ENST00000461682 TNRQ92752 1358 aa23.26■■□□□ 1.31
NDUFB4-202ENST00000461682 ZNF142P52746 1687 aaPredicted RBP23.23■■□□□ 1.31
NDUFB4-202ENST00000461682 CEP170BQ9Y4F5 1589 aaPredicted RBP23.23■■□□□ 1.31
NDUFB4-202ENST00000461682 VWDEQ8N2E2 1590 aa23.22■■□□□ 1.31
NDUFB4-202ENST00000461682 ARHGAP31Q2M1Z3 1444 aa23.21■■□□□ 1.31
NDUFB4-202ENST00000461682 LMTK2Q8IWU2 1503 aa23.21■■□□□ 1.31
NDUFB4-202ENST00000461682 SPATA31D1Q6ZQQ2 1576 aa23.19■■□□□ 1.3
NDUFB4-202ENST00000461682 A2ML1A8K2U0 1454 aa23.19■■□□□ 1.3
NDUFB4-202ENST00000461682 ERVK-7P63135 1459 aa23.19■■□□□ 1.3
NDUFB4-202ENST00000461682 UNC13BO14795 1591 aa23.18■■□□□ 1.3
NDUFB4-202ENST00000461682 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
NDUFB4-202ENST00000461682 STRCQ7RTU9 1775 aa23.14■■□□□ 1.3
NDUFB4-202ENST00000461682 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
NDUFB4-202ENST00000461682 CFAP65Q6ZU64 1925 aaKnown RBP23.14■■□□□ 1.29
NDUFB4-202ENST00000461682 DMRT2Q9Y5R5 561 aa23.13■■□□□ 1.29
NDUFB4-202ENST00000461682 PLA2R1Q13018 1463 aa23.11■■□□□ 1.29
NDUFB4-202ENST00000461682 TET3O43151 1660 aa23.1■■□□□ 1.29
NDUFB4-202ENST00000461682 NAIPQ13075 1403 aa23.1■■□□□ 1.29
NDUFB4-202ENST00000461682 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
NDUFB4-202ENST00000461682 UGGT1Q9NYU2 1555 aa23.09■■□□□ 1.29
NDUFB4-202ENST00000461682 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
NDUFB4-202ENST00000461682 NUP155O75694 1391 aa23.08■■□□□ 1.29
NDUFB4-202ENST00000461682 RPRD2Q5VT52 1461 aaKnown RBP23.08■■□□□ 1.29
NDUFB4-202ENST00000461682 HFM1A2PYH4 1435 aa23.08■■□□□ 1.28
NDUFB4-202ENST00000461682 THEMISQ8N1K5 641 aaPredicted RBP23.07■■□□□ 1.28
NDUFB4-202ENST00000461682 PKD2Q13563 968 aa23.06■■□□□ 1.28
NDUFB4-202ENST00000461682 PTPRTO14522 1441 aa23.06■■□□□ 1.28
NDUFB4-202ENST00000461682 NCKAP5LQ9HCH0 1330 aa23.05■■□□□ 1.28
NDUFB4-202ENST00000461682 NOS1P29475 1434 aa23.03■■□□□ 1.28
NDUFB4-202ENST00000461682 SYNMO15061 1565 aa23.01■■□□□ 1.27
NDUFB4-202ENST00000461682 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
NDUFB4-202ENST00000461682 E9PCH4 1651 aa22.99■■□□□ 1.27
NDUFB4-202ENST00000461682 POLR1AO95602 1720 aaPredicted RBP22.99■■□□□ 1.27
NDUFB4-202ENST00000461682 PIK3C2BO00750 1634 aa22.98■■□□□ 1.27
NDUFB4-202ENST00000461682 ANKLE2Q86XL3 938 aa22.98■■□□□ 1.27
NDUFB4-202ENST00000461682 SLC52A1Q9NWF4 448 aa22.97■■□□□ 1.27
NDUFB4-202ENST00000461682 STAG3Q9UJ98 1225 aa22.97■■□□□ 1.27
NDUFB4-202ENST00000461682 IDI1Q13907 227 aa22.96■■□□□ 1.27
NDUFB4-202ENST00000461682 KDM5AP29375 1690 aaKnown RBP22.94■■□□□ 1.26
NDUFB4-202ENST00000461682 TRIM52Q96A61 297 aa22.94■■□□□ 1.26
NDUFB4-202ENST00000461682 NEURL4Q96JN8 1562 aa22.93■■□□□ 1.26
NDUFB4-202ENST00000461682 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
NDUFB4-202ENST00000461682 SLIT1O75093 1534 aa22.91■■□□□ 1.26
NDUFB4-202ENST00000461682 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
NDUFB4-202ENST00000461682 MED14O60244 1454 aa22.89■■□□□ 1.25
NDUFB4-202ENST00000461682 NPHP4O75161 1426 aaPredicted RBP22.89■■□□□ 1.25
NDUFB4-202ENST00000461682 TMEM2Q9UHN6 1383 aa22.89■■□□□ 1.25
NDUFB4-202ENST00000461682 SCAF11Q99590 1463 aaKnown RBP22.88■■□□□ 1.25
NDUFB4-202ENST00000461682 EID1Q9Y6B2 187 aa22.88■■□□□ 1.25
NDUFB4-202ENST00000461682 TXNDC2Q86VQ3 553 aa22.86■■□□□ 1.25
NDUFB4-202ENST00000461682 SPHKAPQ2M3C7 1700 aa22.85■■□□□ 1.25
NDUFB4-202ENST00000461682 SETD5Q9C0A6 1442 aa22.85■■□□□ 1.25
NDUFB4-202ENST00000461682 IQGAP1P46940 1657 aa22.85■■□□□ 1.25
NDUFB4-202ENST00000461682 CERKQ8TCT0 537 aa22.85■■□□□ 1.25
NDUFB4-202ENST00000461682 SLC4A1APQ9BWU0 796 aaKnown RBP22.85■■□□□ 1.25
NDUFB4-202ENST00000461682 ACIN1Q9UKV3 1341 aaKnown RBP22.83■■□□□ 1.25
NDUFB4-202ENST00000461682 LTKP29376 864 aa22.83■■□□□ 1.25
NDUFB4-202ENST00000461682 ZNF335Q9H4Z2 1342 aaPredicted RBP22.82■■□□□ 1.24
NDUFB4-202ENST00000461682 TMEM131LA2VDJ0 1609 aa22.82■■□□□ 1.24
NDUFB4-202ENST00000461682 CHGAP10645 457 aaKnown RBP22.82■■□□□ 1.24
NDUFB4-202ENST00000461682 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
NDUFB4-202ENST00000461682 MYO5BQ9ULV0 1848 aa22.8■■□□□ 1.24
NDUFB4-202ENST00000461682 TRPM2O94759 1503 aa22.79■■□□□ 1.24
NDUFB4-202ENST00000461682 HDGFP51858 240 aaKnown RBP22.77■■□□□ 1.24
NDUFB4-202ENST00000461682 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
NDUFB4-202ENST00000461682 FBXO41Q8TF61 875 aa22.76■■□□□ 1.23
NDUFB4-202ENST00000461682 ZFYVE9O95405 1425 aa22.75■■□□□ 1.23
NDUFB4-202ENST00000461682 RIMS2Q9UQ26 1411 aa22.75■■□□□ 1.23
NDUFB4-202ENST00000461682 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms