RNA–Protein interactions for RNA: ENST00000461682.1

NDUFB4-202, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 3

Gene NDUFB4, Length 821 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-202ENST00000461682 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
NDUFB4-202ENST00000461682 CCDC180Q9P1Z9 1646 aa33.12■■■□□ 2.89
NDUFB4-202ENST00000461682 ABCC9O60706 1549 aa32.45■■■□□ 2.78
NDUFB4-202ENST00000461682 RB1CC1Q8TDY2 1594 aa31.21■■■□□ 2.59
NDUFB4-202ENST00000461682 NACADO15069 1562 aa31.16■■■□□ 2.58
NDUFB4-202ENST00000461682 DCAF8L2P0C7V8 631 aa31.13■■■□□ 2.57
NDUFB4-202ENST00000461682 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
NDUFB4-202ENST00000461682 MYO15BQ96JP2 1530 aa30.94■■■□□ 2.54
NDUFB4-202ENST00000461682 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
NDUFB4-202ENST00000461682 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
NDUFB4-202ENST00000461682 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.44
NDUFB4-202ENST00000461682 BICRAQ9NZM4 1560 aa30.23■■■□□ 2.43
NDUFB4-202ENST00000461682 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
NDUFB4-202ENST00000461682 SHROOM4Q9ULL8 1493 aa29.95■■■□□ 2.39
NDUFB4-202ENST00000461682 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
NDUFB4-202ENST00000461682 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
NDUFB4-202ENST00000461682 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
NDUFB4-202ENST00000461682 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
NDUFB4-202ENST00000461682 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
NDUFB4-202ENST00000461682 BAZ1AQ9NRL2 1556 aaPredicted RBP28.86■■■□□ 2.21
NDUFB4-202ENST00000461682 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
NDUFB4-202ENST00000461682 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
NDUFB4-202ENST00000461682 SMARCA2P51531 1590 aa28.73■■■□□ 2.19
NDUFB4-202ENST00000461682 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
NDUFB4-202ENST00000461682 HMGXB3Q12766 1538 aa28.6■■■□□ 2.17
NDUFB4-202ENST00000461682 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
NDUFB4-202ENST00000461682 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
NDUFB4-202ENST00000461682 WIZO95785 1651 aa28.35■■■□□ 2.13
NDUFB4-202ENST00000461682 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
NDUFB4-202ENST00000461682 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
NDUFB4-202ENST00000461682 NESP48681 1621 aa28.04■■■□□ 2.08
NDUFB4-202ENST00000461682 ERCC6Q03468 1493 aa28.01■■■□□ 2.07
NDUFB4-202ENST00000461682 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
NDUFB4-202ENST00000461682 CADPSQ9ULU8 1353 aa27.9■■■□□ 2.06
NDUFB4-202ENST00000461682 PDS5BQ9NTI5 1447 aa27.83■■■□□ 2.05
NDUFB4-202ENST00000461682 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
NDUFB4-202ENST00000461682 CCDC88BA6NC98 1476 aa27.72■■■□□ 2.03
NDUFB4-202ENST00000461682 CFTRP13569 1480 aa27.72■■■□□ 2.03
NDUFB4-202ENST00000461682 CUX2O14529 1486 aa27.71■■■□□ 2.03
NDUFB4-202ENST00000461682 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
NDUFB4-202ENST00000461682 FANCD2Q9BXW9 1451 aa27.58■■■□□ 2.01
NDUFB4-202ENST00000461682 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
NDUFB4-202ENST00000461682 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
NDUFB4-202ENST00000461682 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
NDUFB4-202ENST00000461682 PRDM2Q13029 1718 aa27.51■■□□□ 1.99
NDUFB4-202ENST00000461682 WDR62O43379 1518 aa27.44■■□□□ 1.98
NDUFB4-202ENST00000461682 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
NDUFB4-202ENST00000461682 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
NDUFB4-202ENST00000461682 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
NDUFB4-202ENST00000461682 DNMBPQ6XZF7 1577 aa27.1■■□□□ 1.93
NDUFB4-202ENST00000461682 IFT140Q96RY7 1462 aa27■■□□□ 1.91
NDUFB4-202ENST00000461682 CUX1P39880 1505 aa26.9■■□□□ 1.9
NDUFB4-202ENST00000461682 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
NDUFB4-202ENST00000461682 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
NDUFB4-202ENST00000461682 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
NDUFB4-202ENST00000461682 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
NDUFB4-202ENST00000461682 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
NDUFB4-202ENST00000461682 SOGA1O94964 1423 aa26.79■■□□□ 1.88
NDUFB4-202ENST00000461682 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
NDUFB4-202ENST00000461682 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
NDUFB4-202ENST00000461682 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
NDUFB4-202ENST00000461682 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.86
NDUFB4-202ENST00000461682 TOP2BQ02880 1626 aa26.66■■□□□ 1.86
NDUFB4-202ENST00000461682 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
NDUFB4-202ENST00000461682 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
NDUFB4-202ENST00000461682 SYNJ1O43426 1573 aa26.64■■□□□ 1.86
NDUFB4-202ENST00000461682 TDRD9Q8NDG6 1382 aaKnown RBP26.64■■□□□ 1.86
NDUFB4-202ENST00000461682 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
NDUFB4-202ENST00000461682 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
NDUFB4-202ENST00000461682 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
NDUFB4-202ENST00000461682 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
NDUFB4-202ENST00000461682 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
NDUFB4-202ENST00000461682 SNAPC4Q5SXM2 1469 aa26.46■■□□□ 1.83
NDUFB4-202ENST00000461682 MAGI1Q96QZ7 1491 aaPredicted RBP26.43■■□□□ 1.82
NDUFB4-202ENST00000461682 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
NDUFB4-202ENST00000461682 CHD1O14646 1710 aa26.42■■□□□ 1.82
NDUFB4-202ENST00000461682 FBLN2P98095 1184 aa26.41■■□□□ 1.82
NDUFB4-202ENST00000461682 CHMP7Q8WUX9 453 aaPredicted RBP26.33■■□□□ 1.81
NDUFB4-202ENST00000461682 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
NDUFB4-202ENST00000461682 ERICH3Q5RHP9 1530 aa26.25■■□□□ 1.79
NDUFB4-202ENST00000461682 ADAMTS12P58397 1594 aa26.22■■□□□ 1.79
NDUFB4-202ENST00000461682 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
NDUFB4-202ENST00000461682 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
NDUFB4-202ENST00000461682 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
NDUFB4-202ENST00000461682 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.77
NDUFB4-202ENST00000461682 RIMBP3CA6NJZ7 1639 aa26.12■■□□□ 1.77
NDUFB4-202ENST00000461682 RIMBP3BA6NNM3 1639 aa26.12■■□□□ 1.77
NDUFB4-202ENST00000461682 RIMBP3Q9UFD9 1639 aa26.12■■□□□ 1.77
NDUFB4-202ENST00000461682 ARHGEF11O15085 1522 aa26.12■■□□□ 1.77
NDUFB4-202ENST00000461682 TRIM41Q8WV44 630 aa26.06■■□□□ 1.76
NDUFB4-202ENST00000461682 IGF1RP08069 1367 aa26.05■■□□□ 1.76
NDUFB4-202ENST00000461682 NUP160Q12769 1436 aa26.03■■□□□ 1.76
NDUFB4-202ENST00000461682 CUL7Q14999 1698 aa26.02■■□□□ 1.76
NDUFB4-202ENST00000461682 CEP170Q5SW79 1584 aa26.01■■□□□ 1.75
NDUFB4-202ENST00000461682 CARMIL1Q5VZK9 1371 aa25.92■■□□□ 1.74
NDUFB4-202ENST00000461682 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
NDUFB4-202ENST00000461682 CYB5RLQ6IPT4 315 aa25.88■■□□□ 1.73
NDUFB4-202ENST00000461682 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
NDUFB4-202ENST00000461682 SHROOM2Q13796 1616 aa25.83■■□□□ 1.73
NDUFB4-202ENST00000461682 KIAA0586Q9BVV6 1533 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms