RNA–Protein interactions for RNA: ENST00000460469.1

NMD3-202, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-202ENST00000460469 EXOC6Q8TAG9 804 aa23.34■■□□□ 1.33
NMD3-202ENST00000460469 MYBBP1AQ9BQG0 1328 aaKnown RBP23.33■■□□□ 1.33
NMD3-202ENST00000460469 SKAP1Q86WV1 359 aa23.33■■□□□ 1.33
NMD3-202ENST00000460469 PTPRGP23470 1445 aa23.33■■□□□ 1.33
NMD3-202ENST00000460469 UHRF1BP1Q6BDS2 1440 aa23.33■■□□□ 1.32
NMD3-202ENST00000460469 PLIN1O60240 522 aa23.32■■□□□ 1.32
NMD3-202ENST00000460469 ADCY10Q96PN6 1610 aa23.3■■□□□ 1.32
NMD3-202ENST00000460469 ABCA8O94911 1581 aa23.29■■□□□ 1.32
NMD3-202ENST00000460469 ARID4BQ4LE39 1312 aaPredicted RBP23.29■■□□□ 1.32
NMD3-202ENST00000460469 RNF123Q5XPI4 1314 aa23.28■■□□□ 1.32
NMD3-202ENST00000460469 CCDC144AA2RUR9 1427 aa23.28■■□□□ 1.32
NMD3-202ENST00000460469 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
NMD3-202ENST00000460469 PANK3Q9H999 370 aa23.27■■□□□ 1.31
NMD3-202ENST00000460469 DISP3Q9P2K9 1392 aa23.26■■□□□ 1.31
NMD3-202ENST00000460469 RALBP1Q15311 655 aa23.25■■□□□ 1.31
NMD3-202ENST00000460469 FAM135AQ9P2D6 1515 aa23.25■■□□□ 1.31
NMD3-202ENST00000460469 PER1O15534 1290 aaPredicted RBP23.25■■□□□ 1.31
NMD3-202ENST00000460469 RCAN3Q9UKA8 241 aa23.24■■□□□ 1.31
NMD3-202ENST00000460469 LRPPRCP42704 1394 aaKnown RBP23.24■■□□□ 1.31
NMD3-202ENST00000460469 RRP1P56182 461 aaKnown RBP23.24■■□□□ 1.31
NMD3-202ENST00000460469 PLA2R1Q13018 1463 aa23.23■■□□□ 1.31
NMD3-202ENST00000460469 NLRP13Q86W25 1043 aa23.22■■□□□ 1.31
NMD3-202ENST00000460469 NOP58Q9Y2X3 529 aaKnown RBP23.22■■□□□ 1.31
NMD3-202ENST00000460469 BRD4O60885 1362 aaPredicted RBP23.22■■□□□ 1.31
NMD3-202ENST00000460469 PRAG1Q86YV5 1406 aa23.21■■□□□ 1.31
NMD3-202ENST00000460469 TESK2Q96S53 571 aa23.21■■□□□ 1.31
NMD3-202ENST00000460469 KTN1Q86UP2 1357 aaKnown RBP23.21■■□□□ 1.31
NMD3-202ENST00000460469 SHANK2Q9UPX8 1470 aa23.21■■□□□ 1.31
NMD3-202ENST00000460469 SAMD9LQ8IVG5 1584 aa23.21■■□□□ 1.31
NMD3-202ENST00000460469 PLEKHH2Q8IVE3 1493 aa23.21■■□□□ 1.31
NMD3-202ENST00000460469 SYCP2Q9BX26 1530 aa23.21■■□□□ 1.31
NMD3-202ENST00000460469 CCDC141Q6ZP82 1450 aa23.2■■□□□ 1.3
NMD3-202ENST00000460469 ARHGEF12Q9NZN5 1544 aa23.18■■□□□ 1.3
NMD3-202ENST00000460469 KDM5DQ9BY66 1539 aa23.17■■□□□ 1.3
NMD3-202ENST00000460469 ARHGAP5Q13017 1502 aa23.16■■□□□ 1.3
NMD3-202ENST00000460469 A2MP01023 1474 aa23.16■■□□□ 1.3
NMD3-202ENST00000460469 CDC42BPBQ9Y5S2 1711 aa23.14■■□□□ 1.3
NMD3-202ENST00000460469 PARD3Q8TEW0 1356 aa23.14■■□□□ 1.29
NMD3-202ENST00000460469 ANP32AP39687 249 aaKnown RBP23.11■■□□□ 1.29
NMD3-202ENST00000460469 C20orf194Q5TEA3 1177 aa23.11■■□□□ 1.29
NMD3-202ENST00000460469 ADAMTS8Q9UP79 889 aa23.11■■□□□ 1.29
NMD3-202ENST00000460469 AFAP1Q8N556 730 aa23.1■■□□□ 1.29
NMD3-202ENST00000460469 TTC37Q6PGP7 1564 aa23.1■■□□□ 1.29
NMD3-202ENST00000460469 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
NMD3-202ENST00000460469 DEKP35659 375 aaKnown RBP23.08■■□□□ 1.29
NMD3-202ENST00000460469 TMF1P82094 1093 aa23.07■■□□□ 1.28
NMD3-202ENST00000460469 IPO9Q96P70 1041 aaKnown RBP23.07■■□□□ 1.28
NMD3-202ENST00000460469 CRBNQ96SW2 442 aa23.06■■□□□ 1.28
NMD3-202ENST00000460469 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
NMD3-202ENST00000460469 RSPH4AQ5TD94 716 aa23.06■■□□□ 1.28
NMD3-202ENST00000460469 MYT1LQ9UL68 1186 aa23.05■■□□□ 1.28
NMD3-202ENST00000460469 ERBINQ96RT1 1412 aa23.05■■□□□ 1.28
NMD3-202ENST00000460469 TRPM1Q7Z4N2 1603 aa23.05■■□□□ 1.28
NMD3-202ENST00000460469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.05■■□□□ 1.28
NMD3-202ENST00000460469 ZBTB47Q9UFB7 747 aaPredicted RBP23.05■■□□□ 1.28
NMD3-202ENST00000460469 CCDC146Q8IYE0 955 aa23.02■■□□□ 1.28
NMD3-202ENST00000460469 PREX2Q70Z35 1606 aa23.02■■□□□ 1.28
NMD3-202ENST00000460469 E9PCH4 1651 aa23.01■■□□□ 1.27
NMD3-202ENST00000460469 PDE4AP27815 886 aa23.01■■□□□ 1.27
NMD3-202ENST00000460469 COL17A1Q9UMD9 1497 aaPredicted RBP23.01■■□□□ 1.27
NMD3-202ENST00000460469 LAS1LQ9Y4W2 734 aaKnown RBP23■■□□□ 1.27
NMD3-202ENST00000460469 KNSTRNQ9Y448 316 aa22.99■■□□□ 1.27
NMD3-202ENST00000460469 GPRASP1Q5JY77 1395 aa22.98■■□□□ 1.27
NMD3-202ENST00000460469 TRAPPC8Q9Y2L5 1435 aa22.98■■□□□ 1.27
NMD3-202ENST00000460469 PPP2R1AP30153 589 aa22.96■■□□□ 1.27
NMD3-202ENST00000460469 MAGI2Q86UL8 1455 aa22.96■■□□□ 1.27
NMD3-202ENST00000460469 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.27
NMD3-202ENST00000460469 PDE3BQ13370 1112 aa22.95■■□□□ 1.26
NMD3-202ENST00000460469 EFCAB2Q5VUJ9 269 aa22.94■■□□□ 1.26
NMD3-202ENST00000460469 PLEKHH1Q9ULM0 1364 aa22.94■■□□□ 1.26
NMD3-202ENST00000460469 WDR43Q15061 677 aaKnown RBP eCLIP22.93■■□□□ 1.26
NMD3-202ENST00000460469 PRDM15P57071 1507 aaPredicted RBP22.91■■□□□ 1.26
NMD3-202ENST00000460469 SPAG9O60271 1321 aaKnown RBP22.91■■□□□ 1.26
NMD3-202ENST00000460469 AMER1Q5JTC6 1135 aaPredicted RBP22.9■■□□□ 1.26
NMD3-202ENST00000460469 BACH2Q9BYV9 841 aa22.9■■□□□ 1.26
NMD3-202ENST00000460469 SPINK5Q9NQ38 1064 aaPredicted RBP22.9■■□□□ 1.26
NMD3-202ENST00000460469 SLC4A3P48751 1232 aa22.9■■□□□ 1.26
NMD3-202ENST00000460469 TCERG1O14776 1098 aaKnown RBP22.89■■□□□ 1.26
NMD3-202ENST00000460469 CFAP70Q5T0N1 1121 aa22.89■■□□□ 1.26
NMD3-202ENST00000460469 CHD1O14646 1710 aa22.89■■□□□ 1.25
NMD3-202ENST00000460469 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
NMD3-202ENST00000460469 KIF3BO15066 747 aa22.88■■□□□ 1.25
NMD3-202ENST00000460469 UNC13BO14795 1591 aa22.87■■□□□ 1.25
NMD3-202ENST00000460469 TNNT2P45379 298 aaPredicted RBP22.87■■□□□ 1.25
NMD3-202ENST00000460469 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
NMD3-202ENST00000460469 DUSP27Q5VZP5 1158 aa22.86■■□□□ 1.25
NMD3-202ENST00000460469 BLMP54132 1417 aaPredicted RBP22.86■■□□□ 1.25
NMD3-202ENST00000460469 APAF1O14727 1248 aa22.85■■□□□ 1.25
NMD3-202ENST00000460469 DMRT2Q9Y5R5 561 aa22.85■■□□□ 1.25
NMD3-202ENST00000460469 WASHC2CQ9Y4E1 1318 aa22.85■■□□□ 1.25
NMD3-202ENST00000460469 PLCH2O75038 1416 aa22.83■■□□□ 1.25
NMD3-202ENST00000460469 DUOX2Q9NRD8 1548 aa22.83■■□□□ 1.25
NMD3-202ENST00000460469 CHGAP10645 457 aaKnown RBP22.83■■□□□ 1.25
NMD3-202ENST00000460469 IQGAP3Q86VI3 1631 aa22.83■■□□□ 1.24
NMD3-202ENST00000460469 RTL5Q5HYW3 569 aaPredicted RBP22.82■■□□□ 1.24
NMD3-202ENST00000460469 BCAR3O75815 825 aa22.81■■□□□ 1.24
NMD3-202ENST00000460469 RGS3P49796 1198 aa22.81■■□□□ 1.24
NMD3-202ENST00000460469 ABCC2Q92887 1545 aa22.81■■□□□ 1.24
NMD3-202ENST00000460469 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
NMD3-202ENST00000460469 ADGRF5Q8IZF2 1346 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms