RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 LAMC1P11047 1609 aa4.45□□□□□ -1.7
HMGN1P18-201ENST00000457642 CCDC144AA2RUR9 1427 aa4.45□□□□□ -1.7
HMGN1P18-201ENST00000457642 E9PCH4 1651 aa4.45□□□□□ -1.7
HMGN1P18-201ENST00000457642 INSRP06213 1382 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 PREX2Q70Z35 1606 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 CCDC184Q52MB2 194 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 NLRP13Q86W25 1043 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 JPH4Q96JJ6 628 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 BCL11AQ9H165 835 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 ZMYM4Q5VZL5 1548 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 FAM135AQ9P2D6 1515 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 PTPRGP23470 1445 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 MAST1Q9Y2H9 1570 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 RNF123Q5XPI4 1314 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 WASHC2CQ9Y4E1 1318 aa4.44□□□□□ -1.7
HMGN1P18-201ENST00000457642 LRPPRCP42704 1394 aaKnown RBP4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 TCERG1O14776 1098 aaKnown RBP4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 MSH5O43196 834 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 CNGB1Q14028 1251 aaPredicted RBP4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 DCAF11Q8TEB1 546 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 KDM2AQ9Y2K7 1162 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 UNC13BO14795 1591 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 PLXNC1O60486 1568 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 ATP10BO94823 1461 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 TRPM1Q7Z4N2 1603 aa4.43□□□□□ -1.7
HMGN1P18-201ENST00000457642 ARHGAP5Q13017 1502 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 ST20-MTHFSA0A0A6YYL1 179 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 RRP1P56182 461 aaKnown RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 TMF1P82094 1093 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 CDCA8Q53HL2 280 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 PRAG1Q86YV5 1406 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 PNISRQ8TF01 805 aaKnown RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 IPO9Q96P70 1041 aaKnown RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 ZBTB47Q9UFB7 747 aaPredicted RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 IQGAP3Q86VI3 1631 aa4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 COL17A1Q9UMD9 1497 aaPredicted RBP4.42□□□□□ -1.7
HMGN1P18-201ENST00000457642 DUOX2Q9NRD8 1548 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 GPRASP1Q5JY77 1395 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 PARD3Q8TEW0 1356 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 MYO5CQ9NQX4 1742 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 SAMD9LQ8IVG5 1584 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 ERBINQ96RT1 1412 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 MS4A1P11836 297 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 DDRGK1Q96HY6 314 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 RCAN3Q9UKA8 241 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 PRDM15P57071 1507 aaPredicted RBP4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 SYCP2Q9BX26 1530 aa4.41□□□□□ -1.7
HMGN1P18-201ENST00000457642 EIF3AQ14152 1382 aaKnown RBP4.4□□□□□ -1.7
HMGN1P18-201ENST00000457642 SLC24A1O60721 1099 aa4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 HNRNPMP52272 730 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 STAC3Q96MF2 364 aa4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 DNAJC5BQ9UF47 199 aa4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 CDC42BPBQ9Y5S2 1711 aa4.4□□□□□ -1.71
HMGN1P18-201ENST00000457642 BLMP54132 1417 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 ATP10AO60312 1499 aa4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 PPM1GO15355 546 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 DEKP35659 375 aaKnown RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 WDR43Q15061 677 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 DAXXQ9UER7 740 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 RNF17Q9BXT8 1623 aaKnown RBP4.39□□□□□ -1.71
HMGN1P18-201ENST00000457642 A2MP01023 1474 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 MAGI2Q86UL8 1455 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 ABCC2Q92887 1545 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 KNSTRNQ9Y448 316 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 SYNMO15061 1565 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 TTC37Q6PGP7 1564 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 SHROOM2Q13796 1616 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 KANK1Q14678 1352 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 SCAPERQ9BY12 1400 aa4.38□□□□□ -1.71
HMGN1P18-201ENST00000457642 NBR1Q14596 966 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 RGL3Q3MIN7 710 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 EFCAB2Q5VUJ9 269 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 NPM2Q86SE8 214 aaKnown RBP4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 NGEFQ8N5V2 710 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 EXOC6Q8TAG9 804 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 USP35Q9P2H5 1018 aa4.37□□□□□ -1.71
HMGN1P18-201ENST00000457642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 CHD1O14646 1710 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 SPHKAPQ2M3C7 1700 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 PDE4AP27815 886 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 CC2D1BQ5T0F9 858 aaKnown RBP4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 CENPQQ7L2Z9 268 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 PANK3Q9H999 370 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 DISP3Q9P2K9 1392 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 NINLQ9Y2I6 1382 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 RTEL1-TNFRSF6BF6WH68 1400 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 SCAF11Q99590 1463 aaKnown RBP4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 TRPM2O94759 1503 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 ABCC1P33527 1531 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 CLASP1Q7Z460 1538 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 ARAP3Q8WWN8 1544 aa4.36□□□□□ -1.71
HMGN1P18-201ENST00000457642 MADDQ8WXG6 1647 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 KDM5AP29375 1690 aaKnown RBP4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 IQGAP1P46940 1657 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 CEP152O94986 1710 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 KIAA1210Q9ULL0 1709 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 BACH2Q9BYV9 841 aa4.35□□□□□ -1.71
HMGN1P18-201ENST00000457642 SALL2Q9Y467 1007 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms